mRNA_S-ischiensis_contig81.19891.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig81.19891.1 vs. uniprot
Match: D7FR63_ECTSI (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR63_ECTSI) HSP 1 Score: 119 bits (299), Expect = 1.600e-28 Identity = 89/280 (31.79%), Postives = 132/280 (47.14%), Query Frame = 1
Query: 61 LLLCAASLSVSSLVAASYNDAPYEEGHRGEEDYFADRTHQR----GLYDENQQGGGANPWVIGSFSAAGGLLVEWFWTGRALANLRKQFNKDSLEVMQRAETRKELYIDYKQKEYNRYIQEAQEAELVVQQLQAAAIDAGVDV-----------------QVSQQQLDYDEFKQPDLNGDNMITKSEFNHYIKTYLQAYPNIRPEDIPRFEXXXXXXXXXXXXXXXXTYLEAQRLQAEKTNNVYGNDLLNGMYETTARSQGFNQLNNNLNQMGGARQARY 837
+ +C SL+ S +VA Y+D P E ++YF R + GLY E Q G+N V+ + A G +EW+W+ R+ K ++S + ++ + + E +EA++ + QL AAA DAGVD+ + Q ++Y+EFKQPD +GDN+I+K+EF YI+ YL YP+ DIP FE YL+ + Q N DL+ GMY+++A SQ FN L NL G A RY
Sbjct: 6 VFVCVLSLATSVMVAG-YDDRPMNE-----DEYFGARMQEHHQGAGLYQEPQ---GSNKLVLLA-GAIAGASIEWWWSARSAKKGNKLLEQESAAFIAEWNKERDALMARRTYPIKLLAHEVEEADVQLMQLVAAAEDAGVDLGAGGSGLGGGATRPKARSIQQDNMEYEEFKQPDTDGDNVISKTEFYQYIRKYLSLYPDTAEMDIPHFEDFDLNNDGVVSFDEWQMYLDRHQQQDPYAEN----DLMRGMYDSSAGSQNFNTLAQNLRTQGRAGGGRY 271
BLAST of mRNA_S-ischiensis_contig81.19891.1 vs. uniprot
Match: A0A835YQF0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF0_9STRA) HSP 1 Score: 106 bits (264), Expect = 8.600e-24 Identity = 69/187 (36.90%), Postives = 102/187 (54.55%), Query Frame = 1
Query: 148 EEDYFADRTHQ---RGLYDENQQGGGANPWVIGSFSAAGGLLVEWFWTGRALANLRKQFNKDSLEVMQRAETRKELYIDYKQKEYNRYIQEAQEAELVVQQLQAAAIDAGVDVQVSQQQLDYDEFKQPDLNGDNMITKSEFNHYIKTYLQAYPNIRPEDIPRFEXXXXXXXXXXXXXXXXTYLEAQR 699
E++YF R Q R LY E +G G P++ G GG LV+ T RA L K ++ D + + ++ I + K + Q+AEL +++LQ AA+DAG+D+ +Q ++DY EFKQPD N D+ IT++EF+ YI YL+ YP++R ED+PRFE YL+ QR
Sbjct: 22 EDEYFGARMRQGQGRNLYQEPAKGPGVLPYLGGIL---GGFLVDRHLTKRAAKKLAKGYDADRKALEAKLVRIRDDEITKRLKILTNLEVQVQDAELRIEELQQAAVDAGMDLGETQTEVDYAEFKQPDANNDDRITRAEFSAYIAEYLKQYPHLRREDMPRFEDFDFTGDGIVEFKEWQKYLDRQR 205
BLAST of mRNA_S-ischiensis_contig81.19891.1 vs. uniprot
Match: A0A836CPR7_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPR7_9STRA) HSP 1 Score: 104 bits (260), Expect = 4.350e-23 Identity = 68/188 (36.17%), Postives = 99/188 (52.66%), Query Frame = 1
Query: 148 EEDYFADRTHQR----GLYDENQQGGGANPWVIGSFSAAGGLLVEWFWTGRALANLRKQFNKDSLEVMQRAETRKELYIDYKQKEYNRYIQEAQEAELVVQQLQAAAIDAGVDVQVSQQQLDYDEFKQPDLNGDNMITKSEFNHYIKTYLQAYPNIRPEDIPRFEXXXXXXXXXXXXXXXXTYLEAQR 699
EE+YFA R Q GLY E Q+ P V G GG L++ T +A + D + QR + + ++ K ++AEL +++LQ AA+DAG+D+ +Q ++DY+EFKQPD N DN I+++EFN YI YL+ YP++R ED+P+FE YLE QR
Sbjct: 33 EEEYFAARMRQPQRQGGLYQEPQRKQSMLPLVGG---LVGGWLLDMQLTRKADRKRKLSHEHDKKALAQRLQKHRNAEVNKKLVNLANLEALVEDAELRIEELQQAAVDAGMDISATQAEVDYEEFKQPDANHDNRISRAEFNAYIADYLRQYPHLRREDMPKFEDFDSSRDGSVNFKEWQMYLERQR 217
BLAST of mRNA_S-ischiensis_contig81.19891.1 vs. uniprot
Match: A0A7S2VWM5_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VWM5_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 3.130e-17 Identity = 74/254 (29.13%), Postives = 111/254 (43.70%), Query Frame = 1
Query: 88 VSSLVAASYNDAPYEEGHRGEEDYFADRTHQRGLYDENQQGGGANPWVIGSFSAAGGLLVEWFWTGRALANLRKQFNKDSLEVMQRAETRKELYIDY------KQKEYNRYIQEAQEAELVVQQLQAAAIDAGVDVQVSQQQLDYDEFKQPDLNGDNMITKSEFNHYIKTYLQAYPNIRPEDIPRFEXXXXXXXXXXXXXXXXTYLEAQRLQAEKTNNVYGND-------------LLNGMYETTARSQGFNQL 792
V S+ Y+D P ++ Y Q+ D GGG W+ F+ GG +V +GR + +L+KQ K+ K+LY Y Q++ N Y +A+ + V Q+Q +A ++ Q DYDEFKQPD++GD+ I+++EFN Y+K YL YP + +D PRFE + Q QAE YGN+ L G+ T ++ FN L
Sbjct: 14 VISVHGQQYDDYPADDNM-----YHDYAQKQQAKMDRAAGGGGMRTWL---FAGLGGFVVGKLHSGRKVRSLKKQHAKEQ----------KKLYTQYYNDVYKMQEQINEYAYQAEHYKSVAVQVQESA-------ELDAMQRDYDEFKQPDIDGDDRISRAEFNMYVKNYLSNYPGLAEKDYPRFEDFDHDHDGYVSFSEYSQQMALQVQQAE-WEAYYGNNGXXXXXXNQNLANALKGLSGETKKANNFNDL 241
BLAST of mRNA_S-ischiensis_contig81.19891.1 vs. uniprot
Match: A0A7S2LGL3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LGL3_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 1.680e-14 Identity = 53/141 (37.59%), Postives = 73/141 (51.77%), Query Frame = 1
Query: 208 GGGANPWVIGSFSAAGGLLVEWFWTGRALANLRKQFNKDSLEVMQRAETRKELYIDYKQKEYNRYIQEAQEAELVVQQLQAAAIDAGVDVQVSQQQLDYDEFKQPDLNGDNMITKSEFNHYIKTYLQAYPNIRPEDIPRFE 630
GGG VIG A G L F + R L K+ K+ K LY Y Y Q A+ A L +QL+ A + ++ Q DYDEFKQPD++GD+ I+++EFNHY+K YL YP + +D+P+FE
Sbjct: 62 GGGMGKMVIGG--ALGWLAGGKFHSNRTKTKLNKKHKKEQ----------KALYTQYYNDVYQLQTQNAELAYLA-EQLKTHARNVEEQAELDALQRDYDEFKQPDVDGDDRISRAEFNHYVKNYLSNYPGLTEKDMPKFE 189
BLAST of mRNA_S-ischiensis_contig81.19891.1 vs. uniprot
Match: A0A7S2SJ01_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJ01_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 1.070e-13 Identity = 41/111 (36.94%), Postives = 61/111 (54.95%), Query Frame = 1
Query: 493 QLDYDEFKQPDLNGDNMITKSEFNHYIKTYLQAYPNIRPEDIPRFEXXXXXXXXXXXXXXXXTYLEAQRLQAEKTNNVYGN-----DLLNGMYETTARSQGFNQLNNNLNQ 810
Q DY+EFKQPD NGD++I+++EF+ YI+ Y++AYP+I PE+ P FE YL Q+L ++ G+ +N +Y+ TA +Q F L L Q
Sbjct: 129 QRDYEEFKQPDANGDDVISRAEFSQYIRNYMKAYPHIAPEEYPTFEDFDVNRDGLVTFQEWQEYLYQQQLAEQQQQQATGSRGRQQSAVNNLYDQTAGAQNFQNLYEQLQQ 239
BLAST of mRNA_S-ischiensis_contig81.19891.1 vs. uniprot
Match: A0A7S1YLG9_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YLG9_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 1.170e-13 Identity = 78/251 (31.08%), Postives = 120/251 (47.81%), Query Frame = 1
Query: 61 LLLCAASLSVSSLVAASYNDAPYEEGHRGEEDYFADRTHQRGLYDENQQGGGANPWV--IGSFSAAGGLLVEWFWTGRALANLRKQFNKDSLEVMQRAETRKELYIDYKQKEYNRYIQEAQEAELVVQQLQAAAIDAGVDVQVSQQQLDYDEFKQPDLNGDNMITKSEFNHYIKTYLQAYPNIRPEDIPRFEXXXXXXXXXXXXXXXXTYLEAQRLQAEKTNNVYGN-----DLLNGMYETTARSQGFNQL 792
+++ A L+ A Y + P E ++ D ++ + + +Q GGA P + + SA ++ + RA NL+K+F K+ K LY Y Y + +E + + QQLQ A + ++ Q DYDEFKQPD++GD+ I+++EFN Y+K YL YP ++ + XXXXXXXXXXX + Q QAE G + L G+Y T +S+ FN L
Sbjct: 12 VVVATAVLAQGDEYAQEYGEYPNYEDYKEGYDEGSNLYQNYAQHAQEKQLGGAGPGIGKLALCSALAWVVGGKIHSNRATKNLKKKFQKEQ----------KALYSQYYNDIY-KMTEEKNQLQYQNQQLQVALKETEQKAEIEALQRDYDEFKQPDIDGDDRISRAEFNMYVKNYLSNYPGLQEKXXXXXXXXXXXXXXXXXFQEYTQQMALQVQQAEMEQMYSGGTNKKAEALQGLYGQTQKSKDFNDL 251
BLAST of mRNA_S-ischiensis_contig81.19891.1 vs. uniprot
Match: A0A7S3Q1R5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q1R5_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 8.830e-13 Identity = 64/194 (32.99%), Postives = 97/194 (50.00%), Query Frame = 1
Query: 64 LLCAASLSVSSLVAASYNDAP----YEEGHRGEED-YFADRTHQRGLYDENQQGGGANPWVIGSFSAAGGLLVEWFWTGRALANLRKQFNKDSLEVMQRAETRKELYIDYKQKEYNRYIQEAQEAELVVQQLQAAAIDAGVDVQVSQQQLDYDEFKQPDLNGDNMITKSEFNHYIKTYLQAYPNIRPEDIPRFE 630
LL AA L+++S A Y P + +G G+ED +AD ++ + GGG I F G + + + +A NL+K+ K++ K LY Y Y Q A+ AE V++LQ + ++ Q DYDEFKQPD++GD+ I+++EF Y+K YL YP + +D PRFE
Sbjct: 12 LLLAALLTLAS--AQDYGMQPDYTDFADG--GQEDNLYADYAMKQAEKQDGASGGGMVKMAI--FGGVGWVAGAKYHSAKATKNLKKKHMKEA----------KTLYSQYYNDVYKLQEQNAELAE-AVKKLQGMLNSVESEREMEVMQRDYDEFKQPDVDGDDRISRAEFQMYVKNYLANYPGLTEKDYPRFE 188
BLAST of mRNA_S-ischiensis_contig81.19891.1 vs. uniprot
Match: A0A6U3WRH6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3WRH6_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 9.690e-12 Identity = 59/208 (28.37%), Postives = 90/208 (43.27%), Query Frame = 1
Query: 205 QGGGANPWVIGSFSAAGGLLVEWFWTGRALANLRKQFNKDSLEVMQRAETRKELYIDYKQKEYNRYIQEAQEAELVVQQLQAAAIDAGVDVQVSQQQLDYDEFKQPDLNGDNMITKSEFNHYIKTYLQAYPNIRPEDIPRFEXXXXXXXXXXXXXXXXTYLEAQRLQAE------KTNNVYGN------DLLNGMYETTARSQGFNQL 792
+GGG + SA L +GR L K+ +D K LY Y Y Q+A E +L++ QL +D ++ Q +YDEFKQPD++GD+ I+++EF+ Y+K YL YP + +D P+FE + Q +AE ++ G + L +Y + A S GFN L
Sbjct: 11 KGGGFGLGQVALSSAFTYFLGAKIHSGRVAKKLTKKHKQDQ----------KTLYTQYYNDVYKLEEQKA-EQQLIIDQLNNKLLDTSEQHEMENLQREYDEFKQPDIDGDDRISRTEFHMYVKNYLSNYPGLTEKDYPKFEEFDHDKDGYVSFQEYAQQMAVQAQEAELDQYYAQSQGASGKKEAQKANALYDLYGSAADSGGFNDL 207
BLAST of mRNA_S-ischiensis_contig81.19891.1 vs. uniprot
Match: B7G9J8_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G9J8_PHATC) HSP 1 Score: 73.6 bits (179), Expect = 1.320e-11 Identity = 63/192 (32.81%), Postives = 92/192 (47.92%), Query Frame = 1
Query: 37 RTRSRVVPLLLCAASLSVSSLVAASYNDAPYEEGHRGEED--YFADRTHQRGLYDENQQGG-GANPWVIGSFSAAGGLLVEWFWTGRALANLRKQFNKDSLEVMQRAETRKELYIDYKQKEYNRYIQEAQEAELVVQQLQAAAIDAGVDVQVSQQQLDYDEFKQPDLNGDNMITKSEFNHYIKTYLQAYPNI 603
R RS VV LL + + Y+D Y + G D Y Q+G E GG G V+GS A +L F +GR L+ +F K+ K+LY Y Y + ++ QE + +V+QL+ A ++ Q DYDEFKQPD++GD+ I+++EFN Y+K YL YP +
Sbjct: 4 RVRSFVVALLGAVTITTNAQQDYPQYDD--YADADYGSPDNLYHDYAARQQGKVAEGGGGGIGMGKMVLGS--AVSWMLGAKFHSGRVTKKLKAKFQKEQ----------KQLYSQYYNDVY-KLTEQNQELQYMVEQLKEALQSTESKHELEALQRDYDEFKQPDIDGDDRISRAEFNMYVKNYLSNYPGL 180 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig81.19891.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig81.19891.1 >prot_S-ischiensis_contig81.19891.1 ID=prot_S-ischiensis_contig81.19891.1|Name=mRNA_S-ischiensis_contig81.19891.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=272bp MGGKRTRSRVVPLLLCAASLSVSSLVAASYNDAPYEEGHRGEEDYFADRTback to top mRNA from alignment at S-ischiensis_contig81:440595..450063+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig81.19891.1 ID=mRNA_S-ischiensis_contig81.19891.1|Name=mRNA_S-ischiensis_contig81.19891.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=9469bp|location=Sequence derived from alignment at S-ischiensis_contig81:440595..450063+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig81:440595..450063+ >mRNA_S-ischiensis_contig81.19891.1 ID=mRNA_S-ischiensis_contig81.19891.1|Name=mRNA_S-ischiensis_contig81.19891.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1632bp|location=Sequence derived from alignment at S-ischiensis_contig81:440595..450063+ (Schizocladia ischiensis KU_0333)back to top |