mRNA_S-ischiensis_contig8.19755.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig8.19755.1 vs. uniprot
Match: D8LGL6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGL6_ECTSI) HSP 1 Score: 145 bits (367), Expect = 2.020e-42 Identity = 70/109 (64.22%), Postives = 79/109 (72.48%), Query Frame = 1
Query: 31 LVASSARQAVRGAHGAPQPPFARNLAPTSRLDENHELVWDDGVAPETCLDFDAPHVPFAEGARWWLGGFAFFGGMLGLTYLSDAESKRLAVRRGETLPPTAFDPRTLFK 357
+ +++ARQ RG G PQPPFARN +LDENHEL+WDDGVAPET +DFDAPH+ +E WW GG FF GMLGL LSD ESKR AV R TLP TAFDPR LFK
Sbjct: 1 MTSTAARQVARGGGGPPQPPFARNKPVDYQLDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFFAGMLGLVTLSDPESKREAVPRAATLPATAFDPRDLFK 109
BLAST of mRNA_S-ischiensis_contig8.19755.1 vs. uniprot
Match: A0A835ZFI9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFI9_9STRA) HSP 1 Score: 110 bits (274), Expect = 2.970e-28 Identity = 50/92 (54.35%), Postives = 58/92 (63.04%), Query Frame = 1
Query: 85 PPFARNLAPTSRLDENHELVWDDGVAPETCLDFDAPHVPFAEGARWWLGGFAFFGGMLGLTYLSDAESKRLAVRRGETLPPTAFDPRTLFKG 360
PP AR PT RL E EL+WDD VAPE CLDFDAPH+ +G WWLGG FF + + LS E +R A+ R T+PP AFDP LF G
Sbjct: 32 PPMARQPRPTQRLHEEQELMWDDSVAPELCLDFDAPHISRTQGLLWWLGGLGFFAAVFNIVKLSYPEGRREALPRTATMPPAAFDPVDLFTG 123
BLAST of mRNA_S-ischiensis_contig8.19755.1 vs. uniprot
Match: A0A7S2RL45_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RL45_9STRA) HSP 1 Score: 105 bits (262), Expect = 2.350e-26 Identity = 51/82 (62.20%), Postives = 58/82 (70.73%), Query Frame = 1
Query: 79 PQPPFARNLAPTSRLDENHELVWDDGVAPETCLDFDAPHVPFAEGARWWLGGFAFFGGMLGLTYLSDAESKRLAVRRGETLP 324
P+PPFAR LAPT L E HELVWDDGVAPE CLDFDAP+V +G R +LGGF FFG + L S +KRLAV + ET P
Sbjct: 41 PRPPFARALAPTEPLHEEHELVWDDGVAPEPCLDFDAPYVSAMQGLRMFLGGFLFFGTLFTLVGFSAPTAKRLAVPQAETYP 122
BLAST of mRNA_S-ischiensis_contig8.19755.1 vs. uniprot
Match: A0A6V1PJS4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PJS4_HETAK) HSP 1 Score: 103 bits (258), Expect = 8.000e-26 Identity = 56/107 (52.34%), Postives = 64/107 (59.81%), Query Frame = 1
Query: 7 LRHALRRSLVASSA-RQAVRGAHGAPQPPFARNLAPTSRLDENHELVWDDGVAPETCLDFDAPHVPFAEGARWWLGGFAFFGGMLGLTYLSDAESKRLAVRRGETLP 324
LRH R VAS A R +V G PFAR +AP S+L E HELVWDDGVA E CLDFD P VP +G W +GGF FFG ++GL LSD +K R LP
Sbjct: 6 LRHVARACTVASRAGRLSVLRGGGVGDRPFARTIAPVSKLHEEHELVWDDGVAAEACLDFDVPEVPSHKGLAWLMGGFGFFGTVMGLVSLSDPAAKCTTAPRSTVLP 112
BLAST of mRNA_S-ischiensis_contig8.19755.1 vs. uniprot
Match: A0A7S2P129_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P129_9STRA) HSP 1 Score: 102 bits (253), Expect = 4.420e-25 Identity = 46/77 (59.74%), Postives = 53/77 (68.83%), Query Frame = 1
Query: 79 PQPPFARNLAPTSRLDENHELVWDDGVAPETCLDFDAPHVPFAEGARWWLGGFAFFGGMLGLTYLSDAESKRLAVRR 309
P PPFARNLAPT++L E+HELVWDDGVAPE +DFD+ H+ EG WWLGG FF G+ D ESK AV R
Sbjct: 33 PTPPFARNLAPTTKLVEDHELVWDDGVAPELTIDFDSQHISTGEGLAWWLGGLGFFTGLFQFCKTIDMESKNPAVNR 109
BLAST of mRNA_S-ischiensis_contig8.19755.1 vs. uniprot
Match: A0A6U3R2X0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3R2X0_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.200e-24 Identity = 44/81 (54.32%), Postives = 55/81 (67.90%), Query Frame = 1
Query: 82 QPPFARNLAPTSRLDENHELVWDDGVAPETCLDFDAPHVPFAEGARWWLGGFAFFGGMLGLTYLSDAESKRLAVRRGETLP 324
+PPF R LAP L E HELVWDDGVA ETC+DFDAPH+ +EG WW+GGF FF G+ + L D +++ RG T+P
Sbjct: 44 RPPFIRTLAPQGSLHEEHELVWDDGVAAETCIDFDAPHISSSEGFAWWIGGFLFFLGVGTVALLRDPDAQNPTTPRGPTMP 124
BLAST of mRNA_S-ischiensis_contig8.19755.1 vs. uniprot
Match: A0A7R9ZHV7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZHV7_9STRA) HSP 1 Score: 100 bits (249), Expect = 2.530e-24 Identity = 54/103 (52.43%), Postives = 66/103 (64.08%), Query Frame = 1
Query: 4 ALRHALRRSLVAS-SARQAVRGAHGAPQPPFARNLAPTSRLDENHELVWDDGVAPETCLDFDAPHVPFAEGARWWLGGFAFFGGMLGLTYLSDAESKRLAVRR 309
AL LRRS+VA+ S + ++RG + P PPFAR APT +L EN++ VWDDGVAPET LDFD H+ EG WWLGG FF + +D ESK AV R
Sbjct: 29 ALAPLLRRSVVATRSTQSSLRGDYTPPLPPFARIPAPTEKLVENNDAVWDDGVAPETALDFDCQHISSEEGLAWWLGGLGFFFSVYQFVKWTDPESKNPAVNR 131
BLAST of mRNA_S-ischiensis_contig8.19755.1 vs. uniprot
Match: K8YRF0_NANGC (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YRF0_NANGC) HSP 1 Score: 97.4 bits (241), Expect = 3.850e-23 Identity = 51/101 (50.50%), Postives = 57/101 (56.44%), Query Frame = 1
Query: 40 SSARQAVRGAHGA------PQPPFARNLAPTSRLDENHELVWDDGVAPETCLDFDAPHVPFAEGARWWLGGFAFFGGMLGLTYLSDAESKRLAVRRGETLP 324
S R AVR GA P PF R P L E HEL+WDD VA E C+DFDA VP E RWWLGGF FF G+LGL L+D S V + ET+P
Sbjct: 25 SFTRSAVRAGGGAGHNPGPPMQPFKRTAMPEGPLYEEHELIWDDRVAAEMCIDFDASFVPTREAFRWWLGGFGFFFGLLGLVALTDPASVNPCVNKAETMP 125
BLAST of mRNA_S-ischiensis_contig8.19755.1 vs. uniprot
Match: A0A662XNS9_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XNS9_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 5.830e-22 Identity = 52/111 (46.85%), Postives = 68/111 (61.26%), Query Frame = 1
Query: 4 ALRHALRRSLVASSARQAV--RGAHG--APQPPFARNLAPTSRLDENHELVWDDGVAPETCLDFDAPHVPFAEGARWWLGGFAFFGGMLGLTYLSDAESKRLAVRRGETLP 324
AL HALR + ++ RQA+ R HG P PPFAR AP+ L E ELVW+DGVAPET +DFDAPH+P + R WL F ++G+ + + +S R A +RG LP
Sbjct: 5 ALSHALRGGISSTVRRQAIVTRSGHGHRPPPPPFARIAAPSQPLHEEAELVWNDGVAPETLIDFDAPHIPKYQALRHWLYAMGAFATLMGVVTVYNPDSWRQAAKRGNHLP 115
BLAST of mRNA_S-ischiensis_contig8.19755.1 vs. uniprot
Match: D0P109_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0P109_PHYIT) HSP 1 Score: 93.2 bits (230), Expect = 1.170e-21 Identity = 54/110 (49.09%), Postives = 66/110 (60.00%), Query Frame = 1
Query: 7 LRHALRRSLVASSARQAV--RG--AHGAPQPPFARNLAPTSRLDENHELVWDDGVAPETCLDFDAPHVPFAEGARWWLGGFAFFGGMLGLTYLSDAESKRLAVRRGETLP 324
L HALR L + RQA+ RG AH P PPFAR P L E ELVW+DGVAPET +DFDAPH+P + R WL G F ++G+ L + +S R A +RG LP
Sbjct: 6 LSHALRGGLSVNVRRQALATRGNHAHRPPPPPFARIKTPAQPLHEEAELVWNDGVAPETLIDFDAPHIPKYQALRQWLYGLGGFATLMGVVTLYNPDSWRQASKRGNHLP 115 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19755.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19755.1 >prot_S-ischiensis_contig8.19755.1 ID=prot_S-ischiensis_contig8.19755.1|Name=mRNA_S-ischiensis_contig8.19755.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=141bp MALRHALRRSLVASSARQAVRGAHGAPQPPFARNLAPTSRLDENHELVWDback to top mRNA from alignment at S-ischiensis_contig8:3695721..3696551+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig8.19755.1 ID=mRNA_S-ischiensis_contig8.19755.1|Name=mRNA_S-ischiensis_contig8.19755.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=831bp|location=Sequence derived from alignment at S-ischiensis_contig8:3695721..3696551+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig8:3695721..3696551+ >mRNA_S-ischiensis_contig8.19755.1 ID=mRNA_S-ischiensis_contig8.19755.1|Name=mRNA_S-ischiensis_contig8.19755.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=846bp|location=Sequence derived from alignment at S-ischiensis_contig8:3695721..3696551+ (Schizocladia ischiensis KU_0333)back to top |