prot_S-ischiensis_contig8.19725.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19725.1
Unique Nameprot_S-ischiensis_contig8.19725.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length306
Homology
BLAST of mRNA_S-ischiensis_contig8.19725.1 vs. uniprot
Match: A0A6H5JVH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVH6_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 6.150e-34
Identity = 135/386 (34.97%), Postives = 171/386 (44.30%), Query Frame = 0
Query:    1 MDPKSEWALGDFQAAELELVFLDEK-------------------------------------------DKIASTGRGPDEQRGAADVPHVLHQGEDLVALVLVKLPEGRERAEAQR-RWREFGKELSVEVEIVLDNAEGSG---LAEEPSLWRDYEGRQTERDRAVLMRTNCTMSLLPSGGSSXXXXXXXXXXXGPKAVAAGLAYLLEARVHVPVEVLCEPVAIEALLRPTT------IGEHDLAAHALPPADXXXXXXXXXXXXXXXXXXXXXXXA-------ATSADFTGRLHRLFELSRSVPVRVPAKCLRRAVSVVQPLFVASRLHP---APG-----------------GTCLVSLEVQNAHPTEAIMLRSVEVHLDSTVR 306
            MDPKSEWALG+F+   +EL  L+ +                                                         G        +QGE L  L++VK        E +R RWR+FG EL+VE+EI  +    +G   L+EEPSLWRDYEGR+  RDR VL R+N T+SL P G                    A L Y L+  V VPV+ L + V +EAL+ P +      +    +AA   P  D        XXXXXXXXXXXXXXX            DF  RL  LF LSR  PVR+P +     + VVQP+ V SR  P   +P                  G CLV+LEV+N HP  AI +  VEVH+D+T R
Sbjct:    1 MDPKSEWALGEFRDPPIELRILEHRVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHGRVLPAWTAYQGERLTGLLVVKFDVASADGEDRRSRWRQFGTELNVELEITTEAVASAGTAFLSEEPSLWRDYEGRENTRDRGVLARSNRTVSLSPEGSQLQS--------------GAELVYALDMEVQVPVDSLGQNVVLEALVSPPSGRRSECVNTRGVAAG--PSRDTSGASSGAXXXXXXXXXXXXXXXXXXXGRRRGIGGDFATRLDGLFALSRVAPVRLPVRRCFLPLRVVQPITVTSRSCPFTSSPAAXXXXXXXXXGAFAGAIGRCLVALEVRNDHPAAAITVHDVEVHVDATAR 370          
BLAST of mRNA_S-ischiensis_contig8.19725.1 vs. uniprot
Match: D7FI50_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI50_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 5.240e-29
Identity = 106/268 (39.55%), Postives = 133/268 (49.63%), Query Frame = 0
Query:   74 RWREFGKELSVEVEIVLDNAEGSG---LAEEPSLWRDYEGRQTERDRAVLMRTNCTMSLLPSGGSSXXXXXXXXXXXGPKAVAAGLAYLLEARVHVPVEVLCEPVAIEALLRPTTIGEHDLA----AHALPPADXXXXXXXXXXXXXXXXXXXXXXXA-------ATSADFTGRLHRLFELSRSVPVRVPAKCLRRAVSVVQPLFVASRLHPAPG---------------------GTCLVSLEVQNAHPTEAIMLRSVEVHLDSTVR 306
            RWR+FG EL+VE+EI  +    +G   L+EEPSLWRDYEGR+  RDR VL R+N T+SL P                 P    A L Y L+  V VPV+ L + V +EAL+ P +    +        A P  D          XXXXXXXXXXXXX            +F  RL  LF LSR  PVR+P +     + VVQP+ V SR  P+                       G CLV+LEV+N HP  AI +  VEVH+D+T R
Sbjct:   26 RWRQFGSELNVELEITTEAVASAGTAFLSEEPSLWRDYEGRENARDRGVLARSNRTVSLSPEAPP-------------PLQSGAELVYALDMEVQVPVDSLGQNVVLEALVSPPSGRRSECVNTPGVAAAPSKDTSGASCGAGGXXXXXXXXXXXXXXXXXXRRRGIGGNFATRLDGLFALSRVAPVRLPVRRCFLPLRVVQPITVTSRSCPSTSSXXXXXXXXXXXXGGAFAGAIGRCLVALEVRNDHPAAAITVHDVEVHVDATAR 280          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19725.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JVH6_9PHAE6.150e-3434.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI50_ECTSI5.240e-2939.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:3374795..3381769 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19725.1mRNA_S-ischiensis_contig8.19725.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 3374643..3381769 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19725.1 ID=prot_S-ischiensis_contig8.19725.1|Name=mRNA_S-ischiensis_contig8.19725.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=306bp
MDPKSEWALGDFQAAELELVFLDEKDKIASTGRGPDEQRGAADVPHVLHQ
GEDLVALVLVKLPEGRERAEAQRRWREFGKELSVEVEIVLDNAEGSGLAE
EPSLWRDYEGRQTERDRAVLMRTNCTMSLLPSGGSSGGSGGGGGDAGGPK
AVAAGLAYLLEARVHVPVEVLCEPVAIEALLRPTTIGEHDLAAHALPPAD
PPGSPAGGGGGGGSGGSAAEGTAAATSADFTGRLHRLFELSRSVPVRVPA
KCLRRAVSVVQPLFVASRLHPAPGGTCLVSLEVQNAHPTEAIMLRSVEVH
LDSTVR
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