prot_S-ischiensis_contig8.19619.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19619.1
Unique Nameprot_S-ischiensis_contig8.19619.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length305
Homology
BLAST of mRNA_S-ischiensis_contig8.19619.1 vs. uniprot
Match: A0A6H5JJT0_9PHAE (CobW C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJT0_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 3.110e-52
Identity = 127/285 (44.56%), Postives = 151/285 (52.98%), Query Frame = 0
Query:   13 MAELDTMVTVVDSSTFLDKVRRADDLSERDQASAADGDTRTVADLLVAQ---VEFADVILLNKADLTAREDLALLEGFVAKLNPAARVLRTTGAGVGLREVMGT--------SLSRGWRVPGSDPTAATAAASPPGLAGASGGIDNHPEGEHGXXXXXXXXXXDSTCRDDHSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGDQGTPAATGEAQAVDSFGITSFTYRSFRPFHPTRLMGFVVEHLPSVLRSKGLMWLATRPDQAGVWNQAGGSFASEAGGPWE 286
            M  LDT+VTVVDS++FL++VR+ADDL ER   S  +GDTRTVADLL++Q   VEFA+VILLNK+DL   ED+A LEG V +LNP ARV RT  + VGL EV+GT        S + GW                  L G S   ++HP                      HSH                                               +GI SFT+RS RPFHP RLMGFV+EHLPSVLRSKG +WLATR D  GVWNQAGGSFA+E GG W+
Sbjct:  342 MYSLDTLVTVVDSTSFLEEVRKADDLEERGLESG-EGDTRTVADLLMSQANTVEFANVILLNKSDLATEEDMAALEGLVRRLNPTARVERTVSSAVGLTEVLGTGEFDLEEASKAAGW------------------LRGLSDDDEDHP----------------------HSH-----------------------------------------------YGIESFTFRSRRPFHPERLMGFVMEHLPSVLRSKGFLWLATREDSLGVWNQAGGSFATEYGGLWD 538          
BLAST of mRNA_S-ischiensis_contig8.19619.1 vs. uniprot
Match: A0A7S3Y427_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y427_HETAK)

HSP 1 Score: 149 bits (376), Expect = 3.870e-38
Identity = 104/273 (38.10%), Postives = 133/273 (48.72%), Query Frame = 0
Query:   13 MAELDTMVTVVDSSTFLDKVRRADDLSERDQASAADGDTRTVADLLVAQVEFADVILLNKADLTAREDLALLEGFVAKLNPAARVLRTTGAGVGLREVMGTSLSRGWRVPGSDPTAATAAASPPGLAGASGGIDNHPEGEHGXXXXXXXXXXDSTCRDDHSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGDQGTPAATGEAQAVDSFGITSFTYRSFRPFHPTRLMGFVVEHLPSVLRSKGLMWLATRPDQAGVWNQAGGSFASEAGGPW 285
            +A LDTMVTVVD++ F  ++R AD+L  R  A A +GD RTVADLLVAQVEFADVILLNK DL    D+ L+E  + +LNP AR+++T  + VGL++V+GT      +           AA  PG             GEH                                                                  + +GI+SF +R+ RPFHP RLM FVV  + +V+RSKG  WLATR DQ GVW+QAGGS+    GG W
Sbjct:  156 VATLDTMVTVVDAAGFPRELRAADELGARGLA-AGEGDGRTVADLLVAQVEFADVILLNKIDLVEANDVVLVENMIKRLNPDARIIQTINSKVGLQQVVGTGAFDFDK-----------AAQAPGWL-------QELNGEH--------------------------------------------------------------VPETEEYGISSFIFRARRPFHPERLMDFVVSDMSTVIRSKGFCWLATRNDQMGVWSQAGGSYTQGPGGAW 347          
BLAST of mRNA_S-ischiensis_contig8.19619.1 vs. uniprot
Match: UPI0018EFAA9B (GTP-binding protein n=2 Tax=Mycobacteroides chelonae TaxID=1774 RepID=UPI0018EFAA9B)

HSP 1 Score: 130 bits (327), Expect = 1.080e-31
Identity = 93/268 (34.70%), Postives = 125/268 (46.64%), Query Frame = 0
Query:   13 MAELDTMVTVVDSSTFLDKVRRADDLSERDQASAADGDTRTVADLLVAQVEFADVILLNKADLTAREDLALLEGFVAKLNPAARVLRTTGAGVGLREVMGTSLSRGWRVPGSDPTAATAAASPPGLAGASGGIDNHPEGEHGXXXXXXXXXXDSTCRDDHSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGDQGTPAATGEAQAVDSFGITSFTYRSFRPFHPTRLMGFVVEHLPSVLRSKGLMWLATRPDQAGVWNQAGGSFASE 280
            +A+LDTMVTVVD+STFL ++ R + L++RD A AADGD R++ADLL  QVEFADV++LNK DL     L ++E  + +LNP A ++R+TG  V L  V+ T L                    P LA  + G D                                                                 A G     + +GI+S T+RS RPFHP RL    +E L  +LRSKG  W+A+RPD A +W+QAG +   E
Sbjct:  106 VAKLDTMVTVVDASTFLPELARGEALADRDMA-AADGDARSIADLLTDQVEFADVLILNKVDLVNERTLGMVETLLRRLNPTATIVRSTGGSVDLDLVLQTGLFD------------------PELAAQAPGWDEE--------------------------------------------------------------IADGHTPETEEYGISSMTFRSDRPFHPQRLNA-ALEALQGLLRSKGFCWIASRPDIAAIWSQAGPNLTIE 291          
BLAST of mRNA_S-ischiensis_contig8.19619.1 vs. uniprot
Match: D6ZF73_SEGRD (Cobalamin synthesis protein P47K n=1 Tax=Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578) TaxID=640132 RepID=D6ZF73_SEGRD)

HSP 1 Score: 129 bits (324), Expect = 5.170e-31
Identity = 98/280 (35.00%), Postives = 129/280 (46.07%), Query Frame = 0
Query:   13 MAELDTMVTVVDSSTFLDKVRRADDLSERDQASAADGDTRTVADLLVAQVEFADVILLNKADLTAREDLALLEGFVAKLNPAARVLRTTGAGVGLREVMGTSLSRGWRVPGSDPTAATAAASPPGLAGASGGIDNHPEGEHGXXXXXXXXXXDSTCRDDHSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGDQGTPAATGEAQAVDSFGITSFTYRSFRPFHPTRLMGFVVEHLPSVLRSKGLMWLATRPDQAGVWNQAGGSFASEAGGPW-ETPSRP 291
            +A+LDTMVTVVD+STFL++V + + LSERD   A +GD R+++DLLV QVEFADVILLNK DL   +    LE  + ++NP AR++RT    V + EV+GT L                    P  A  + G D    G H                                                       TP         + +GI SF +R+ +PFHP RL    +  L  VLRSKG  W+A+RP+ A VW+QAG +   E    W ETP  P
Sbjct:  134 IAKLDTMVTVVDASTFLEEVGKGEALSERD-LEAGEGDNRSISDLLVDQVEFADVILLNKTDLVNGQIAGALEALLRRMNPNARIIRTVQGEVPISEVLGTGLYN------------------PEAAALADGWDEELAGGH-------------------------------------------------------TPE-------TEEYGIRSFAFRADKPFHPLRLQA-ALRDLRGVLRSKGFCWIASRPNIAAVWSQAGPNLVIEPAQYWAETPLEP 331          
BLAST of mRNA_S-ischiensis_contig8.19619.1 vs. uniprot
Match: A0A7I7QF20_9MYCO (Cobalamin biosynthesis protein CobW n=1 Tax=Mycobacterium stomatepiae TaxID=470076 RepID=A0A7I7QF20_9MYCO)

HSP 1 Score: 128 bits (322), Expect = 8.740e-31
Identity = 99/275 (36.00%), Postives = 125/275 (45.45%), Query Frame = 0
Query:   13 MAELDTMVTVVDSSTFLDKVRRADDLSERDQASAADGDTRTVADLLVAQVEFADVILLNKADLTAREDLALLEGFVAKLNPAARVLRTTGAGVGLREVMGTSLSRGWRVPGSDPTAATAAASPPGLAGASGGIDNHPEGEHGXXXXXXXXXXDSTCRDDHSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGDQGTPAATGEAQAVDSFGITSFTYRSFRPFHPTRLMGFVVEHLPSVLRSKGLMWLATRPDQAGVWNQAGGSFASEAGGPWET 287
            +A+LDTMVTVVD+STFL ++ R D L+ RD A  +D D+RT+ADLLV QVEFADVILLNK DL   E  A     + +LNP+AR++ T    V L EV+GT L                    P LA  S G D    G H                                                       TP         + +GI S T+R+ RP HP RL    +E L  +LRSKG  W+A+RPD A +W+QAG +   E    W T
Sbjct:  130 VAKLDTMVTVVDASTFLRELARGDALAARDLA-VSDADSRTIADLLVDQVEFADVILLNKTDLVTEESGARTAAMLRRLNPSARIVPTDHGRVPLAEVLGTGLFD------------------PDLAAESPGWDQEISGGH-------------------------------------------------------TPE-------TEEYGIGSVTFRARRPLHPQRLHE-ALEQLQGLLRSKGFCWIASRPDVAAIWSQAGPNLVIEPAQYWTT 322          
BLAST of mRNA_S-ischiensis_contig8.19619.1 vs. uniprot
Match: UPI001EFBD766 (GTP-binding protein n=1 Tax=Mycobacterium lentiflavum TaxID=141349 RepID=UPI001EFBD766)

HSP 1 Score: 128 bits (322), Expect = 8.740e-31
Identity = 98/276 (35.51%), Postives = 126/276 (45.65%), Query Frame = 0
Query:   13 MAELDTMVTVVDSSTFLDKVRRADDLSERDQASAADG-DTRTVADLLVAQVEFADVILLNKADLTAREDLALLEGFVAKLNPAARVLRTTGAGVGLREVMGTSLSRGWRVPGSDPTAATAAASPPGLAGASGGIDNHPEGEHGXXXXXXXXXXDSTCRDDHSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGDQGTPAATGEAQAVDSFGITSFTYRSFRPFHPTRLMGFVVEHLPSVLRSKGLMWLATRPDQAGVWNQAGGSFASEAGGPWET 287
            +A LDTMVTVVD+STFL ++ R D L+ RD A   DG D RT+ADLLV QVEFADVILLNK DL   +  A +   + +LNP+AR++ T    V L +V+GT L                    P LA  + G D    G H                                                       TP         + +GI+S T+R+ RPFHP RL    +E L  +LRSKG  W+A+RPD A +W+QAG +   E    W T
Sbjct:  130 VARLDTMVTVVDASTFLQELARGDALAARDLA--VDGTDIRTIADLLVDQVEFADVILLNKTDLVGEDVCARVTAVLRRLNPSARIMPTNHGRVPLEQVLGTGLFD------------------PDLAAQAAGWDEELRGGH-------------------------------------------------------TPE-------TEEYGISSVTFRAQRPFHPERLQA-ALEELQGLLRSKGFCWIASRPDLAAIWSQAGPNLMIEPAQYWAT 322          
BLAST of mRNA_S-ischiensis_contig8.19619.1 vs. uniprot
Match: A0A2R5HFR8_9MYCO (Cobalamin biosynthesis protein CobW n=1 Tax=Mycobacterium montefiorense TaxID=154654 RepID=A0A2R5HFR8_9MYCO)

HSP 1 Score: 127 bits (320), Expect = 8.970e-31
Identity = 98/275 (35.64%), Postives = 126/275 (45.82%), Query Frame = 0
Query:   13 MAELDTMVTVVDSSTFLDKVRRADDLSERDQASAADGDTRTVADLLVAQVEFADVILLNKADLTAREDLALLEGFVAKLNPAARVLRTTGAGVGLREVMGTSLSRGWRVPGSDPTAATAAASPPGLAGASGGIDNHPEGEHGXXXXXXXXXXDSTCRDDHSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGDQGTPAATGEAQAVDSFGITSFTYRSFRPFHPTRLMGFVVEHLPSVLRSKGLMWLATRPDQAGVWNQAGGSFASEAGGPWET 287
            +A LDTMVTVVD+STFL ++ R D L  RD A  +D D RT+ADLLV QVEFADV+LLNK DL + E  A +   + +LNP+AR++ T    V L EV+GT L                    P LA  S G D    G H                                                       TP         + +GI+S T+R+ RPFHP RL    +E +  +LRSKG  W+A+RP+ A VW+QAG +   E    W T
Sbjct:  130 VARLDTMVTVVDASTFLSELARGDALVARDLA-VSDADIRTIADLLVDQVEFADVLLLNKIDLVSEEARARVTAVLRRLNPSARMVTTDHGRVPLAEVLGTGLFD------------------PDLAAESPGWDQEISGGH-------------------------------------------------------TPE-------TEEYGISSVTFRARRPFHPQRLHA-ALEEMQGLLRSKGFCWIASRPEVAAVWSQAGPNLMIEPAQYWVT 322          
BLAST of mRNA_S-ischiensis_contig8.19619.1 vs. uniprot
Match: UPI0007A538FF (GTP-binding protein n=1 Tax=Nocardia pseudovaccinii TaxID=189540 RepID=UPI0007A538FF)

HSP 1 Score: 127 bits (319), Expect = 2.390e-30
Identity = 96/273 (35.16%), Postives = 120/273 (43.96%), Query Frame = 0
Query:   13 MAELDTMVTVVDSSTFLDKVRRADDLSERDQASAADGDTRTVADLLVAQVEFADVILLNKADLTAREDLALLEGFVAKLNPAARVLRTTGAGVGLREVMGTSLSRGWRVPGSDPTAATAAASPPGLAGASGGIDNHPEGEHGXXXXXXXXXXDSTCRDDHSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGDQGTPAATGEAQAVDSFGITSFTYRSFRPFHPTRLMGFVVEHLPSVLRSKGLMWLATRPDQAGVWNQAGGSFASEAGGPW 285
            +A LDTMVTVVD+STFL ++ R   L+ER+   A DGDTRT+ADLLV QVEFADV+L+NK DL + +    +E  V +LNP A VLRT    V L EV+ T                      P LA  S G D    G H                                                                  + +GI S TY + RPFHP RL   + + L  +LRSKG  WLA+RPD A +W+QAG +   E    W
Sbjct:  131 IARLDTMVTVVDASTFLAEIARGQALAERN-LEAGDGDTRTIADLLVDQVEFADVLLINKTDLVSAKAAGTVEATVRRLNPRAHVLRTEKGAVDLAEVLATGRYN------------------PVLAAESDGWDEELAGGH--------------------------------------------------------------IPETEEYGIGSLTYTADRPFHPERLADALTQ-LRGMLRSKGFCWLASRPDLAAIWSQAGPNLTFEPAAWW 321          
BLAST of mRNA_S-ischiensis_contig8.19619.1 vs. uniprot
Match: A0A5A7WJX1_9MYCO (GTP-binding protein n=1 Tax=Mycolicibacterium sp. P9-64 TaxID=2024612 RepID=A0A5A7WJX1_9MYCO)

HSP 1 Score: 127 bits (318), Expect = 3.270e-30
Identity = 93/273 (34.07%), Postives = 127/273 (46.52%), Query Frame = 0
Query:   13 MAELDTMVTVVDSSTFLDKVRRADDLSERDQASAADGDTRTVADLLVAQVEFADVILLNKADLTAREDLALLEGFVAKLNPAARVLRTTGAGVGLREVMGTSLSRGWRVPGSDPTAATAAASPPGLAGASGGIDNHPEGEHGXXXXXXXXXXDSTCRDDHSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGDQGTPAATGEAQAVDSFGITSFTYRSFRPFHPTRLMGFVVEHLPSVLRSKGLMWLATRPDQAGVWNQAGGSFASEAGGPW 285
            +A LDTMVTVVD+ TFL ++ R +DL+ RD A A +GD+R+++DLLV QVEFADVILLNK DL     +A +E  + +LNP+A++++T    V L  V+GT L                    P LA  S   D    G H                                                       TP         + +GI+S TY+S RPFHP RL    ++ +  +LRSKG  W+A+RPD A +W+QAG +   E    W
Sbjct:  130 LARLDTMVTVVDAVTFLPELARGEDLASRDMA-AGEGDSRSISDLLVDQVEFADVILLNKTDLVGERTVATVESVLRRLNPSAQIVQTLRGVVNLSTVLGTGLFD------------------PDLAAQSPEWDEELTGGH-------------------------------------------------------TPE-------TEEYGISSITYKSDRPFHPQRLWD-TLDDIRGLLRSKGFCWIASRPDIAAIWSQAGPNLTIEPAQYW 320          
BLAST of mRNA_S-ischiensis_contig8.19619.1 vs. uniprot
Match: A0A0B8N0P6_9NOCA (GTPase n=4 Tax=Nocardia TaxID=1817 RepID=A0A0B8N0P6_9NOCA)

HSP 1 Score: 127 bits (318), Expect = 3.380e-30
Identity = 93/274 (33.94%), Postives = 124/274 (45.26%), Query Frame = 0
Query:   13 MAELDTMVTVVDSSTFLDKVRRADDLSERDQASAADGDTRTVADLLVAQVEFADVILLNKADLTAREDLALLEGFVAKLNPAARVLRTTGAGVGLREVMGTSLSRGWRVPGSDPTAATAAASPPGLAGASGGIDNHPEGEHGXXXXXXXXXXDSTCRDDHSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGDQGTPAATGEAQAVDSFGITSFTYRSFRPFHPTRLMGFVVEHLPSVLRSKGLMWLATRPDQAGVWNQAGGSFASEAGGPWE 286
            +A LDTMVTVVD STFL +V +   L+ER+  + A GD RT+ADLL+ QVEFA+V++LNK DL     +  +E  + +LNPAAR++ +    V L +V+GT L                    P LA    G D    G H                                                       TP         + +GI+S T+ + RPFHP RL    +  L  +LRSKG  WLATRPD A +W+QAG +   EAG  W+
Sbjct:  131 LARLDTMVTVVDCSTFLAEVVKGQALAERNMQAGA-GDARTIADLLIDQVEFANVLVLNKTDLVTANAVGTVEATIRRLNPAARIVHSAHGVVDLAQVLGTGLYN------------------PDLAAQFDGWDEELAGGH-------------------------------------------------------TPE-------TEEYGISSLTFTADRPFHPERLEA-ALSQLHRLLRSKGFFWLATRPDLAAIWSQAGPNLTFEAGAHWQ 322          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19619.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJT0_9PHAE3.110e-5244.56CobW C-terminal domain-containing protein n=1 Tax=... [more]
A0A7S3Y427_HETAK3.870e-3838.10Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
UPI0018EFAA9B1.080e-3134.70GTP-binding protein n=2 Tax=Mycobacteroides chelon... [more]
D6ZF73_SEGRD5.170e-3135.00Cobalamin synthesis protein P47K n=1 Tax=Segnilipa... [more]
A0A7I7QF20_9MYCO8.740e-3136.00Cobalamin biosynthesis protein CobW n=1 Tax=Mycoba... [more]
UPI001EFBD7668.740e-3135.51GTP-binding protein n=1 Tax=Mycobacterium lentifla... [more]
A0A2R5HFR8_9MYCO8.970e-3135.64Cobalamin biosynthesis protein CobW n=1 Tax=Mycoba... [more]
UPI0007A538FF2.390e-3035.16GTP-binding protein n=1 Tax=Nocardia pseudovaccini... [more]
A0A5A7WJX1_9MYCO3.270e-3034.07GTP-binding protein n=1 Tax=Mycolicibacterium sp. ... [more]
A0A0B8N0P6_9NOCA3.380e-3033.94GTPase n=4 Tax=Nocardia TaxID=1817 RepID=A0A0B8N0P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011629Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminalSMARTSM00833CobW_C_3coord: 224..304
e-value: 1.8E-13
score: 60.8
IPR011629Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminalPFAMPF07683CobW_Ccoord: 224..287
e-value: 1.3E-15
score: 57.1
IPR003495CobW/HypB/UreG, nucleotide-binding domainPFAMPF02492cobWcoord: 14..98
e-value: 6.5E-9
score: 35.6
NoneNo IPR availableGENE3D3.40.50.300coord: 7..115
e-value: 4.1E-16
score: 61.4
NoneNo IPR availablePANTHERPTHR43603FAMILY NOT NAMEDcoord: 11..285
NoneNo IPR availableSUPERFAMILY90002Hypothetical protein YjiA, C-terminal domaincoord: 224..290
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 9..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:2573384..2576324 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19619.1mRNA_S-ischiensis_contig8.19619.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 2573384..2576324 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19619.1 ID=prot_S-ischiensis_contig8.19619.1|Name=mRNA_S-ischiensis_contig8.19619.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=305bp
GCTDGPDAAAPVMAELDTMVTVVDSSTFLDKVRRADDLSERDQASAADGD
TRTVADLLVAQVEFADVILLNKADLTAREDLALLEGFVAKLNPAARVLRT
TGAGVGLREVMGTSLSRGWRVPGSDPTAATAAASPPGLAGASGGIDNHPE
GEHGHDHSQHGHSHDSTCRDDHSHDHQHPHGDQHGHSHGHHHHHHHHHHH
AHGRGDQGTPAATGEAQAVDSFGITSFTYRSFRPFHPTRLMGFVVEHLPS
VLRSKGLMWLATRPDQAGVWNQAGGSFASEAGGPWETPSRPDPAAAATAA
SGTGV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011629Cbl_biosynth_CobW-like_C
IPR003495CobW/HypB/UreG_dom
IPR027417P-loop_NTPase