mRNA_S-ischiensis_contig8.19563.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig8.19563.1 vs. uniprot
Match: D8LSF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSF6_ECTSI) HSP 1 Score: 146 bits (369), Expect = 1.580e-36 Identity = 81/187 (43.32%), Postives = 110/187 (58.82%), Query Frame = 2
Query: 2 EERLRQMIRRRFEFTVPGRLTKAFRHFDARRRGRIGKAELSAGLQRLGFRLSTRQENSLLESMDLDGDGEVSYPEFVVFVRDPNHGDVASRLARGLAAGAELDGDPAVPAQELKRELSAQDTHGQGVVGARDLEQALQRLGAGLTSGEVGRLLHLFDIHEDGTVDIDTAAHYVETWLQENASPSSSR 562
EERLRQMIRRRF+ +PG L KAFRHFDARR+G++ + +LS GL+RLG L+TRQE L +MDLD G + YP+ VVF RDPNH DV ++ L V ++ EL +D G GV+ + L L+ G L ++GRL+H FD HE+ ++ A VE + E + +R
Sbjct: 631 EERLRQMIRRRFDIWIPGTLKKAFRHFDARRKGKVSEPDLSDGLRRLGLELATRQERGLFRTMDLDTQGFLVYPDLVVFARDPNHHDVRDKVLGRLNR---------VTESRIRGELERRDPSGSGVISEKSLRNILETFGVDLAGADLGRLMHRFDAHENM---VEYMAREVENDVWERVAAEMAR 805
BLAST of mRNA_S-ischiensis_contig8.19563.1 vs. uniprot
Match: A0A7S3NNZ0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NNZ0_9STRA) HSP 1 Score: 129 bits (324), Expect = 1.780e-30 Identity = 74/185 (40.00%), Postives = 113/185 (61.08%), Query Frame = 2
Query: 2 EERLRQMIRRRFEFTVPGRLTKAFRHFDARRRGRIGKAELSAGLQRLGFRLSTRQENSLLESMDLDGDGEVSYPEFVVFVRDPNHGDVASRLARGLAAGAELDGDPAVPAQELKRELSAQDTHGQGVVGARDLEQALQRLG-AGLTSGEVGRLLHLFDIHEDGTVDIDTAAHYVETWLQENASPS 553
EERLR MI+R+F++ VPGRL KAFRHFD +++G I ++EL+ GL L + S Q +L SMDLD DG +S EF++FV+DP H + ++ R + + A+ +++ +R D G G+ G RD AL +LG AGL++ E+ RL FDI +DG V I+ ++++ + SP+
Sbjct: 756 EERLRAMIKRKFDWWVPGRLRKAFRHFDIKKKGLISQSELADGLSALKLKHSAEQLYALFSSMDLDKDGLISCSEFIIFVKDPWHHFIERKIKRAIR-------NSALSSRDARRIFDDLDRGGTGLFGRRDFATALTQLGVAGLSTSEIQRLAQRFDIEDDGNVMIERFFNFLQGTTESTHSPA 933
BLAST of mRNA_S-ischiensis_contig8.19563.1 vs. uniprot
Match: A0A7S3ZSY2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZSY2_9STRA) HSP 1 Score: 116 bits (290), Expect = 6.220e-26 Identity = 75/189 (39.68%), Postives = 106/189 (56.08%), Query Frame = 2
Query: 2 EERLRQMIRRRFEFTVPGRLTKAFRHFDARRRGRIGKAELSAGLQRLGFRLSTRQENSLLESMDLDGDGEVSYPEFVVFVRDPNHGDVASRLARGLAAGAELDGDPAVPAQELKRELSAQDTHGQGVVGARDLEQALQRLGAGLTSGEVGRLLHLFDIHEDGTVDIDTAAHY----VETWLQENASPSS 556
EE+LR MI+RRFE+ PG L +A++HFD +R+ ++ A+L+ GL+ L +LS +QE L + MDLD DG +SY EF+VFVRDP H + ++ D A++ R++ D + G+VG RD L+RLG LTS E RL FD E G V + VE+ Q N S +S
Sbjct: 1759 EEKLRAMIKRRFEWWQPGALRRAYKHFDTKRKNKLLPADLADGLRALKVKLSAQQEQDLFDGMDLDKDGTISYTEFIVFVRDPCHPFLEQKVRYATHRAKLRPSD----AEDALRDV---DDNRSGLVGLRDFGVVLERLGVELTSSERKRLAQRFDGDESGNVSSSAFLAFLKGDVESGEQGNPSLAS 1940
BLAST of mRNA_S-ischiensis_contig8.19563.1 vs. uniprot
Match: A0A7S3ZSY1_9STRA (Hypothetical protein (Fragment) n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZSY1_9STRA) HSP 1 Score: 116 bits (290), Expect = 6.230e-26 Identity = 75/189 (39.68%), Postives = 106/189 (56.08%), Query Frame = 2
Query: 2 EERLRQMIRRRFEFTVPGRLTKAFRHFDARRRGRIGKAELSAGLQRLGFRLSTRQENSLLESMDLDGDGEVSYPEFVVFVRDPNHGDVASRLARGLAAGAELDGDPAVPAQELKRELSAQDTHGQGVVGARDLEQALQRLGAGLTSGEVGRLLHLFDIHEDGTVDIDTAAHY----VETWLQENASPSS 556
EE+LR MI+RRFE+ PG L +A++HFD +R+ ++ A+L+ GL+ L +LS +QE L + MDLD DG +SY EF+VFVRDP H + ++ D A++ R++ D + G+VG RD L+RLG LTS E RL FD E G V + VE+ Q N S +S
Sbjct: 1759 EEKLRAMIKRRFEWWQPGALRRAYKHFDTKRKNKLLPADLADGLRALKVKLSAQQEQDLFDGMDLDKDGTISYTEFIVFVRDPCHPFLEQKVRYATHRAKLRPSD----AEDALRDV---DDNRSGLVGLRDFGVVLERLGVELTSSERKRLAQRFDGDESGNVSSSAFLAFLKGDVESGEQGNPSLAS 1940
BLAST of mRNA_S-ischiensis_contig8.19563.1 vs. uniprot
Match: A0A7S1U271_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U271_9STRA) HSP 1 Score: 112 bits (281), Expect = 9.450e-25 Identity = 70/176 (39.77%), Postives = 97/176 (55.11%), Query Frame = 2
Query: 2 EERLRQMIRRRFEFTVPGRLTKAFRHFDARRRGRIGKAELSAGLQ---RLGFRLSTRQENSLLESMDLDGDGEVSYPEFVVFVRDPNHGDVASRLARGLAAGAELDGDPAVPAQELKRELSAQDTHGQGVVGARDLEQALQRLGAGLTSGEVGRLLHLFDIHEDGTVDIDTAAHYV 520
EE R ++R+RF++ VP L KAF HFD ++G +A + GL+ R+G RLS QE+ L MDLDGDG V+YP+FVVF+RDPNH DV+ RL R L V A ++ L ++ V R ++ + LG LT E+ R++ F EDG V I +V
Sbjct: 812 EEHFRNLVRQRFDYWVPNGLRKAFYHFDVDKQGEFNEARFADGLKLLRRMG-RLSADQEHLLFARMDLDGDGLVTYPDFVVFIRDPNHVDVSHRLRRDLRRAD-------VSAARMREMLEDEENTRGATVSKRTFDRVMGDLGVSLTRQEMDRIIIRFSPDEDGAVSIRRVMAFV 979
BLAST of mRNA_S-ischiensis_contig8.19563.1 vs. uniprot
Match: A0A7S2S4Y5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S4Y5_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 7.590e-14 Identity = 39/74 (52.70%), Postives = 53/74 (71.62%), Query Frame = 2
Query: 2 EERLRQMIRRRFEFTVPGRLTKAFRHFDARRRGRIGKAELSAGLQRLGFRLSTRQENSLLESMDLDGDGEVSYP 223
EE+LR +I++ F++ VPG+L K FRHF+ R+ RI +A+LS GL+ L FRLS QE+ L +D D DG VSYP
Sbjct: 86 EEKLRLLIKKDFQWRVPGKLRKVFRHFNVHRKPRITEADLSGGLKALKFRLSAEQEHQLFMVLDHDRDGLVSYP 159
BLAST of mRNA_S-ischiensis_contig8.19563.1 vs. uniprot
Match: A0A7S2WJ84_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJ84_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 1.530e-10 Identity = 47/106 (44.34%), Postives = 58/106 (54.72%), Query Frame = 2
Query: 203 DGEVSYPEFVVFVRDPNHGDVASRLARGLAAGAELDGDPAVPAQELKRELSAQDTHGQGVVGARDLEQALQRLGAGLTSGEVGRLLHLFDIHEDGTVDIDTAAHYV 520
DG VSYP+ VVFVRDPNH VA R AEL+ VPA +++ L DT+ +VG D E+ L RLG L EV RL FD +EDG + I +V
Sbjct: 1 DGLVSYPDLVVFVRDPNHHHVAHRFR------AELNKLGVVPAT-VRQLLEESDTNDSKLVGMVDFERVLGRLGIALGHDEVRRLAMRFDDNEDGNLSIKRIISFV 99
BLAST of mRNA_S-ischiensis_contig8.19563.1 vs. uniprot
Match: A0A8B7NQ42_HYAAZ (neo-calmodulin-like n=1 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7NQ42_HYAAZ) HSP 1 Score: 63.5 bits (153), Expect = 9.280e-9 Identity = 48/160 (30.00%), Postives = 73/160 (45.62%), Query Frame = 2
Query: 26 RRRFEFTVPGRLTKAFRHFDARRRGRIGKAELSAGLQRLGFRLSTRQENSLLESMDLDGDGEVSYPEFVVFVRDPN-HGDVASRLARGLAAGAELDGDPAVPAQELKRELSAQDTHGQGVVGARDLEQALQRLGAGLTSGEVGRLLHLFDIHEDGTVDID 502
RR+ T + FR FD G I K EL ++ LG +T + NS+L+ +D+DGDG S+ EFV V + HG+ + +EL+ D HG+G + A DL L+ LG L ++ ++ DI DG +D +
Sbjct: 14 RRKISRTQEREFRELFRLFDKDGDGTITKQELGRVMRSLGQFATTEELNSMLDEIDIDGDGTFSFNEFVEIVCNMGGHGERSREDEE----------------KELRDAFKIFDKHGRGYICASDLRAVLRCLGEDLDEDDIEDMIREVDIDGDGRIDFE 157
BLAST of mRNA_S-ischiensis_contig8.19563.1 vs. uniprot
Match: UPI00063FA77E (calmodulin-like protein 5 n=1 Tax=Propithecus coquereli TaxID=379532 RepID=UPI00063FA77E) HSP 1 Score: 61.6 bits (148), Expect = 2.290e-8 Identity = 42/147 (28.57%), Postives = 70/147 (47.62%), Query Frame = 2
Query: 71 FRHFDARRRGRIGKAELSAGLQRLGFRLSTRQENSLLESMDLDGDGEVSYPEFVVFVRDPNHGDVASRLARGLAAGAELDGDPAVPAQELKRELSAQDTHGQGVVGARDLEQALQRLGAGLTSGEVGRLLHLFDIHEDGTVDIDTAA 511
F+ D R G+I EL +Q +G +LS + ++E +D + DG +S+PEF+ + G +G+E Q+L+ A D G G + +L QA+ +LG L+ E+ L+ D ++DG VD + A
Sbjct: 17 FKRVDKDRDGKIDAKELGEAIQAMGKKLSEEEVKKIIEKLDSNHDGTISFPEFLAELGKKVQG-----------SGSE---------QDLRATFRAFDLDGDGHISVDELRQAIAQLGVQLSQEELDALVREADTNQDGQVDFEEFA 143
BLAST of mRNA_S-ischiensis_contig8.19563.1 vs. uniprot
Match: UPI001E27910E (neo-calmodulin-like isoform X1 n=1 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E27910E) HSP 1 Score: 62.8 bits (151), Expect = 3.690e-8 Identity = 46/143 (32.17%), Postives = 67/143 (46.85%), Query Frame = 2
Query: 68 AFRHFDARRRGRIGKAELSAGLQRLGFRLSTRQENSLLESMDLDGDGEVSYPEFVVFVRDPNHGDVASRLARGLAAGAELDGDPAVPAQELKRELSAQDTHGQGVVGARDLEQALQRLGAGLTSGEVGRLLHLFDIHEDGTVD 496
AFR FD G I K EL ++ LG T + +L+ +D+DGDG VS+ EFV D+A A + E + +EL+ D H +G + A DL LQ LG L+ E+ ++ D+ DG +D
Sbjct: 90 AFRLFDKDGDGCITKEELGRVMRSLGQFARTEELQQMLQEVDVDGDGNVSFEEFV---------DIAWTAAGSIPEEEEEE-------KELRDAFRVFDKHNRGYITASDLRAVLQCLGEDLSEEEIEDMIKEVDVDGDGRID 216 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19563.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19563.1 >prot_S-ischiensis_contig8.19563.1 ID=prot_S-ischiensis_contig8.19563.1|Name=mRNA_S-ischiensis_contig8.19563.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=235bp MIRRRFEFTVPGRLTKAFRHFDARRRGRIGKAELSAGLQRLGFRLSTRQEback to top mRNA from alignment at S-ischiensis_contig8:2212540..2215558+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig8.19563.1 ID=mRNA_S-ischiensis_contig8.19563.1|Name=mRNA_S-ischiensis_contig8.19563.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3019bp|location=Sequence derived from alignment at S-ischiensis_contig8:2212540..2215558+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig8:2212540..2215558+ >mRNA_S-ischiensis_contig8.19563.1 ID=mRNA_S-ischiensis_contig8.19563.1|Name=mRNA_S-ischiensis_contig8.19563.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1410bp|location=Sequence derived from alignment at S-ischiensis_contig8:2212540..2215558+ (Schizocladia ischiensis KU_0333)back to top |