prot_S-ischiensis_contig8.19561.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19561.1
Unique Nameprot_S-ischiensis_contig8.19561.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length106
Homology
BLAST of mRNA_S-ischiensis_contig8.19561.1 vs. uniprot
Match: A0A6H5KU01_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU01_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 3.390e-25
Identity = 58/96 (60.42%), Postives = 68/96 (70.83%), Query Frame = 0
Query:    4 VRRLRRRAQATVLEAAQRLEEGLEGFDQPYKRYDWRRTGRVPPAEFRRATASAGFPFSRGEAACLAFAFGDGRTVGYSKFLAWATPEGPGKDALYA 99
            V +L RRAQAT++EAAQR++   E FD+PY RYDWRRTGRV  A F R+TA  GFPF+R +AA LA  FGDG  V Y  FL+WATP   G D L A
Sbjct:  144 VGKLLRRAQATIVEAAQRMDSDFEAFDRPYLRYDWRRTGRVGTAAFVRSTARCGFPFTRAQAAFLAGVFGDGSDVSYPTFLSWATP---GPDGLAA 236          
BLAST of mRNA_S-ischiensis_contig8.19561.1 vs. uniprot
Match: D8LSF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSF6_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 2.360e-24
Identity = 57/96 (59.38%), Postives = 67/96 (69.79%), Query Frame = 0
Query:    4 VRRLRRRAQATVLEAAQRLEEGLEGFDQPYKRYDWRRTGRVPPAEFRRATASAGFPFSRGEAACLAFAFGDGRTVGYSKFLAWATPEGPGKDALYA 99
            V +L RRAQAT++EAAQR++   E FD+PY  YDWRRTGRV  AEF R+T   GFPF+R +AA LA  FGDG  V Y  FL+WATP   G D L A
Sbjct:  137 VGKLLRRAQATIVEAAQRMDSDFEAFDRPYLCYDWRRTGRVGTAEFVRSTVRCGFPFTRAQAAFLAGVFGDGSDVSYPTFLSWATP---GPDGLAA 229          
BLAST of mRNA_S-ischiensis_contig8.19561.1 vs. uniprot
Match: A0A836CCF4_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCF4_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 6.540e-17
Identity = 48/91 (52.75%), Postives = 55/91 (60.44%), Query Frame = 0
Query:    1 EVDVRRLRRRAQATVLEAAQRLEEGLEGFDQPYKRYDWRRTGRVPPAEFRRATASAGFPFSRGEAACLAFAFGDGRTVGYSKFLAWATPEG 91
            E+D   LRRRA+A V EAAQR    L      +  YDWR TGR        A  +AGFPF+R E A LA  FGDG TV Y +FLAWATP+G
Sbjct: 1922 EIDAAALRRRAKAAVAEAAQRCGGDLSELTAAFSHYDWRETGR--------ALQTAGFPFTRAEGAALAGRFGDGATVAYPQFLAWATPQG 2004          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19561.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KU01_9PHAE3.390e-2560.42EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D8LSF6_ECTSI2.360e-2459.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CCF4_9STRA6.540e-1752.75EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 27..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:2207737..2208664 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19561.1mRNA_S-ischiensis_contig8.19561.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 2207737..2208665 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19561.1 ID=prot_S-ischiensis_contig8.19561.1|Name=mRNA_S-ischiensis_contig8.19561.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=106bp
EVDVRRLRRRAQATVLEAAQRLEEGLEGFDQPYKRYDWRRTGRVPPAEFR
RATASAGFPFSRGEAACLAFAFGDGRTVGYSKFLAWATPEGPGKDALYAG
VEDHDG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair