mRNA_S-ischiensis_contig8.19442.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig8.19442.1 vs. uniprot
Match: A0A6H5KPF6_9PHAE (EngB-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPF6_9PHAE) HSP 1 Score: 414 bits (1064), Expect = 1.650e-132 Identity = 209/286 (73.08%), Postives = 241/286 (84.27%), Query Frame = 1
Query: 7 VTAAAAVYPNVIAAYARSGDRDEALRLLEGAVRARLPLETSAANRLLRGFHKRRDLEGVFKVLDAMAAGGAEPNDETYEWIGNAAVRSAEFVTGAVSVATLPKAGY-PEAAFIGRSNVGKSSLINMVCNRKALAYTSKRPGKTQQFNYFLMNNGTENAFYLVDMPGLGYAKVPEKDRKRWAAFLRGYISERPTLRVLFHLVDGRHGPLDQDRAIMEMMRGLIASARYVVVLTKADKRDNSVSRAVLQQTVDALREAGCPRTPVLLTSANNRLGRDGMWRYLRLAAL 861
V+AA +VYPN+I A++R+G R +A+RLLE ARLP++T AANRLL+GFHKRRDLE VFKVLD MAA G + +DETYEW+ NAAVR +FV GAVS+ATLPK PEAAFIGRSNVGKSSLINMVCNRKALA+TSKRPGKTQQFNYFLMNN TEN+FYLVD+PG+GYAKVPEK RK W+ R YI+ R +LRVLFHL+DGRHGP+ QD AIM++M L +ARYVVVLTKADK DNSVSR VL+ V ALREAG RTPV+LTSA ++LGRDGMWRYLRLAAL
Sbjct: 328 VSAATSVYPNLITAFSRNGKRGDAMRLLEAMANARLPVKTPAANRLLQGFHKRRDLEAVFKVLDVMAAAGVDGDDETYEWLANAAVRGVDFVKGAVSMATLPKEPVLPEAAFIGRSNVGKSSLINMVCNRKALAFTSKRPGKTQQFNYFLMNNNTENSFYLVDLPGMGYAKVPEKQRKEWSTLFRSYITRRSSLRVLFHLIDGRHGPVGQDHAIMKLMAELPDTARYVVVLTKADKSDNSVSRQVLEGVVAALREAGVSRTPVVLTSAASKLGRDGMWRYLRLAAL 613
BLAST of mRNA_S-ischiensis_contig8.19442.1 vs. uniprot
Match: A0A836C8M6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8M6_9STRA) HSP 1 Score: 340 bits (871), Expect = 1.770e-108 Identity = 182/301 (60.47%), Postives = 218/301 (72.43%), Query Frame = 1
Query: 13 AAAAVYPNVIAAYARSGDRDEALRLLEGAVRARLPLETSAANRLLRGFHKRRDLEGVFKVLDAMAAGGAEPNDETYEWIGNAAVRSAEFVTGAVSVATLPKAGYPEAAFIGRSNVGKSSLINMVCNRKALAYTSKRPGKTQQFNYFLMNNGTE---------NAFYLVDMPGLGYAKVPEKDRKRWAAFLRGYISERPTLRVLFHLVDGRHGPLDQDRAIMEMMRGLIASARYVVVLTKADKRDNSVSRAVLQQTVDALREAGCPRTPVLLTSANNRLGRDGMWRYLRLAAL----GGDAA 876
A AA+YP++ +A R+G R AL LE R R+ + AANRL+R +RRDL VF VLDAM A PND+TYE + NAAVRS EFVTGAVS+ TLP+ PEAAFIGRSNVGKSSL+NMVCNRKALAYTSKRPGKTQQ N+F +N G +AFYLVDMPG GYAKV E+ R W L+ Y+++R +LRVLFHL+DGRHGP+ D+AIM+ M L + ARYV+VLTKADK+DN+VS V+ T+ ALREAG PV++TSA +LGRD MWRYLRLAAL GG AA
Sbjct: 10 AQAALYPSLASALFRAGARRRALAALEDMARGRVAISIDAANRLIRAAQRRRDLRAVFAVLDAMTAARVAPNDDTYEAVANAAVRSVEFVTGAVSMETLPRKWLPEAAFIGRSNVGKSSLVNMVCNRKALAYTSKRPGKTQQLNFFEVNGGAAAAGAGDGEAHAFYLVDMPGHGYAKVSEQLRTSWQDLLKQYVAQRRSLRVLFHLLDGRHGPVGHDKAIMKEMARLPSYARYVIVLTKADKQDNTVSAGVMAATITALREAGVENAPVVITSAETKLGRDAMWRYLRLAALDRSGGGRAA 310
BLAST of mRNA_S-ischiensis_contig8.19442.1 vs. uniprot
Match: A0A4D9D8J4_9STRA (EngB-type G domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8J4_9STRA) HSP 1 Score: 288 bits (736), Expect = 3.000e-84 Identity = 153/285 (53.68%), Postives = 194/285 (68.07%), Query Frame = 1
Query: 13 AAAAVYPNVIAAYARSGDRDEALRLLEGAVRARLPLETSAANRLLRGFHKRRDLEGVFKVLDAMAAGGAEPNDETYEWIGNAAVRSAEFVTGAVSVATLPKAGYPEAAFIGRSNVGKSSLINMVCNRKALAYTSKRPGKTQQFNYFLMNNGTENAFYLVDMPGLGYAKVPEKDRKRWAAFLRGYISERPTLRVLFHLVDGRHGPLDQDRAIMEMMRG-LIASARYVVVLTKADKRDNSVSRAVLQQTVDALREAGCPRT-PVLLTSANNRLGRDGMWRYLRLAAL 861
AA + V A + D A RLL VR LP N LLR K+R ++ +F LD M GGA P+ ++Y+ + N VRS +FV GAVS+ TLP PE FIGRSNVGKSSL+NMVCNRK LAY SKRPGKTQQFNYFL+N+ T++AFY+VD+PG+GYAKVP ++ +WA+F Y+++R +L+V+FHL+D RHGPL QD ME MR L +YV++LTKADK+D VS ++ QQ DAL T PVL+TSA NRLGRD +WRYLRLA +
Sbjct: 374 AALGMLTTVTKAMLKKEDISGASRLLRTVVRWHLPPPMEICNELLRLQGKQRRVDAMFVTLDLMREGGAHPDTDSYQHLANTLVRSVDFVAGAVSMETLPTRMLPEVCFIGRSNVGKSSLLNMVCNRKDLAYVSKRPGKTQQFNYFLVNDKTKSAFYMVDVPGVGYAKVPLAEKSKWASFFESYLAQRSSLKVVFHLIDSRHGPLAQDLMTMEAMRASLRPGVQYVIILTKADKKDGKVSPSLKQQVADALDAHQLKETTPVLVTSAVNRLGRDEVWRYLRLAVI 658
BLAST of mRNA_S-ischiensis_contig8.19442.1 vs. uniprot
Match: A0A6V1PQB5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PQB5_HETAK) HSP 1 Score: 262 bits (669), Expect = 7.720e-80 Identity = 131/215 (60.93%), Postives = 163/215 (75.81%), Query Frame = 1
Query: 223 PNDETYEWIGNAAVRSAEFVTGAVSVATLPKAGYPEAAFIGRSNVGKSSLINMVCNRKALAYTSKRPGKTQQFNYFLMNNGTENAFYLVDMPGLGYAKVPEKDRKRWAAFLRGYISERPTLRVLFHLVDGRHGPLDQDRAIMEMMRGLIA-SARYVVVLTKADKRDNSVSRAVLQQTVDALREAGCPRTPVLLTSANNRLGRDGMWRYLRLAALG 864
P+DET+E++ NAA ++ EFVTG+VS+ TLPK PEAA IG+SNVGKSSL+NM+CNRK LA+TSK+PGKTQQFNYF +N+G+E+ FYLVD+PGLGYAKVP+ R +W FL YISER L+VLFHL+D RHGP++ D IM M R +A A+YVVVLTKADK+D V RAV AL PV++TSA +RLGRD MW +L+ A LG
Sbjct: 12 PDDETFEFLANAAAKNIEFVTGSVSMETLPKTRLPEAAIIGKSNVGKSSLVNMICNRKNLAFTSKKPGKTQQFNYFKINSGSEHEFYLVDVPGLGYAKVPKHLRDQWVQFLTQYISERKGLKVLFHLIDSRHGPVETDLEIMGMARDHLAPGAQYVVVLTKADKKDGKVPRAVRAAVAAALEAEYGSGAPVVITSAESRLGRDAMWHHLKRATLG 226
BLAST of mRNA_S-ischiensis_contig8.19442.1 vs. uniprot
Match: A0A7S1EK19_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EK19_HEMAN) HSP 1 Score: 258 bits (660), Expect = 1.890e-75 Identity = 145/282 (51.42%), Postives = 183/282 (64.89%), Query Frame = 1
Query: 25 VYPNVIAAYARSGDRDEALRLLEGAVRARLPLETSAANRLLRGFHKRRDLEGVFKVLDAMAAGGAEPNDETYEWIGNAAVRSAEFVTGAVSVATLPKAGYPEAAFIGRSNVGKSSLINMVCNRKALAYTSKRPGKTQQFNYFLMNNGTE--NAFYLVDMPGLGYAKVPEKDRKRWAAFLRGYISERPTLRVLFHLVDGRHGPLDQDRAIMEMMRGLIASARYVVVLTKADKRDNSVSRAVLQQTVDALREAGCPR-TPVLLTSANNRLGRDGMWRYLRLAAL 861
VYP A R+G A L+ +R + N L++ F K L+GVF VLDAM G E + ET E++ NAAVR EFV GAVSV TLP PEA F GRSNVGKSSL+NM+ NRK LA++SK PGKTQQFNYF++N + N F+LVD+PG+GYAKVP R+ W FL Y+++R +L+VLFHLVD RHGP D +M++ SA +VVVLTK DK D V ++++ DAL E GC R TP+L TSA + GRD +W YL+LAAL
Sbjct: 88 VYPVAAQAALRTGRVSLARDLVIRLKGSRDSAPVTTYNYLIKQFGKAGSLQGVFLVLDAMKEAGVEADAETLEFLSNAAVRQIEFVKGAVSVDTLPDP-LPEACFAGRSNVGKSSLVNMLSNRKKLAFSSKTPGKTQQFNYFVVNGQDDVGNKFHLVDLPGVGYAKVPVAVRREWVGFLTSYLTQRESLKVLFHLVDSRHGPQKDDLELMKLYAETKCSAAFVVVLTKIDKIDGKVRQSIVDGVRDALVECGCSRDTPILQTSAETKRGRDEVWNYLKLAAL 368
BLAST of mRNA_S-ischiensis_contig8.19442.1 vs. uniprot
Match: A0A2V3IQZ2_9FLOR (Putative GTP-binding protein EngB n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQZ2_9FLOR) HSP 1 Score: 252 bits (644), Expect = 1.640e-72 Identity = 129/247 (52.23%), Postives = 172/247 (69.64%), Query Frame = 1
Query: 118 LETSAANRLLRGFHKRRDLEGVFKVLDAMAAGGAEPNDETYEWIGNAAVRSAEFVTGAVSVATLPKAGYPEAAFIGRSNVGKSSLINMVCNRKALAYTSKRPGKTQQFNYFLMNNGT-ENAFYLVDMPGLGYAKVPEKDRKRWAAFLRGYISERPTLRVLFHLVDGRHGPLDQDRAIMEMMRGLIASARYVVVLTKADKRDNS-VSRAVLQQTVDALREAGC-PRTPVLLTSANNRLGRDGMWRYLR 849
+E N +R K + LE VF+VLD + +P++ET+E++ NAAVR FV GAVS+ TLP+ E AF+GRSNVGKSSL+NM+CNRKALAY S RPGKTQQFNYFL+N + E FYLVD+PG+GYAKVP ++ W F+R Y+ R +LR++FHL+DGRHG L D +M+ + G +YV+VLTK DK D R+V+ +T AL GC P P++LTSA++RLGRD MWR+++
Sbjct: 254 VEIGLYNTAIRMLGKNKMLESVFEVLDMVRLAQVKPDNETFEFLANAAVRQVRFVKGAVSMDTLPEPLGAEVAFVGRSNVGKSSLVNMICNRKALAYVSGRPGKTQQFNYFLVNERSPETQFYLVDLPGVGYAKVPIPVKEEWLRFMRQYLKHRTSLRIVFHLIDGRHGALADDEQLMQEIAGYGKGLQYVLVLTKMDKADKQRAKRSVMDKTRAALVRNGCSPDIPIVLTSASSRLGRDDMWRHMQ 500
BLAST of mRNA_S-ischiensis_contig8.19442.1 vs. uniprot
Match: A0A7S2XQU2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XQU2_9STRA) HSP 1 Score: 239 bits (610), Expect = 2.890e-70 Identity = 130/252 (51.59%), Postives = 167/252 (66.27%), Query Frame = 1
Query: 181 VFKVLDAMAAGGAEPNDETYEWIGNAAVRSAEFVTGAVSVATLPKAGYPEAAFIGRSNVGKSSLINMVCNRKALAYTSKRPGKTQQFNYFLMNNGTE-----------------NAFYLVDMPGLGYAKVPEKDRKRWAAFLRGYISERPTLRVLFHLVDGRHGPLDQDRAIMEMM-RGLIASARYVVVLTKADKRDNSVSRA----VLQQTVDALREA----GCPRTPVLLTSANNRLGRDGMWRYLRLAA 858
V+ VL+AM ++ +D TYE + NA VR FVTGAV + P+A EA FIGRSNVGKSSL+NMV NRK+LAYTSKRPGKTQQFN+F +N+ + ++FY+VD+PG+G+AKVP+K ++ WA F+ YIS+R T+RV+FHLVD RHGP+D+D IM+ + + I + +YVVVLTKADK S V +D LREA PVLLTSA +LGRD MWRY+RLAA
Sbjct: 36 VYSVLNAMTTFPSDNSDRTYEALSNALVRRTLFVTGAVDMTGCPEADRGEAVFIGRSNVGKSSLVNMVTNRKSLAYTSKRPGKTQQFNFFTVNDKPDREKEFKYGDFVPGEKDPDSFYIVDLPGVGFAKVPQKIKQEWADFMSEYISKRKTIRVIFHLVDARHGPIDEDMRIMQTIGQNSIKNTKYVVVLTKADKNTKGASSTSGGRVSSDVMDKLREAMKANKVANAPVLLTSAQTKLGRDEMWRYMRLAA 287
BLAST of mRNA_S-ischiensis_contig8.19442.1 vs. uniprot
Match: R7Q9B2_CHOCR (EngB-type G domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9B2_CHOCR) HSP 1 Score: 244 bits (622), Expect = 9.380e-70 Identity = 131/260 (50.38%), Postives = 174/260 (66.92%), Query Frame = 1
Query: 112 LPLETSAA-------NRLLRGFHKRRDLEGVFKVLDAMAAGGAEPNDETYEWIGNAAVRSAEFVTGAVSVATLPKAGYPEAAFIGRSNVGKSSLINMVCNRKALAYTSKRPGKTQQFNYFLMN-NGTENAFYLVDMPGLGYAKVPEKDRKRWAAFLRGYISERPTLRVLFHLVDGRHGPLDQDRAIMEMMRGLIASAR----YVVVLTKADKRDNS-VSRAVLQQTVDALREAGCPR-TPVLLTSANNRLGRDGMWRYLR 849
LP++ AA N +R K R + GVF +LD M A E N+ETYE++ NAAVR +FVTGAVS+ TLP E AF+GRSNVGKSSL+NM+CNRKALAY S PGKTQQFNYF +N E+ FY+VD+PG+GYA+VP ++ W F+ Y+ R +LR++FHL+DGRHG + D ++MR + AS R YVVV TK DK D + +AV+ +T AL GC TP++++S++ RLGRD MWR+L+
Sbjct: 199 LPIQDDAAALPIKEYNNCIRVLGKSRSMPGVFAILDLMKASKVEANNETYEFLANAAVRQVDFVTGAVSMDTLPPPITTEVAFVGRSNVGKSSLVNMLCNRKALAYVSGTPGKTQQFNYFHVNAKDQESQFYMVDLPGVGYARVPRPVQEAWIRFMEQYLQYRTSLRLIFHLIDGRHGAMTDDE---QLMRLIAASGRQKGEYVVVFTKMDKMDKQKLKQAVINETRSALSRNGCRSDTPIVISSSSTRLGRDEMWRHLQ 455
BLAST of mRNA_S-ischiensis_contig8.19442.1 vs. uniprot
Match: A0A7S2FR04_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FR04_9STRA) HSP 1 Score: 243 bits (619), Expect = 8.980e-69 Identity = 131/258 (50.78%), Postives = 173/258 (67.05%), Query Frame = 1
Query: 115 PLETSAANRLLRGFHKRRDLEGVFKVLDAMAAGGAEPNDETYEWIGNAAVRSAEFVTGAVSVATLPKAGYPEAAFIGRSNVGKSSLINMVCNRKALAYTSKRPGKTQQFNYFLMNNGT----ENAFYLVDMPGLGYAKVPEKDRKRWAAFLRGYISERPTLRVLFHLVDGRHGPLDQDRAIMEMMRGLIASAR--YVVVLTKADKRDNS-----VSRAVLQQTVD-ALREAGCPRTPVLLTSANNRLGRDGMWRYLRL 852
P+ N+LL+ F R L +F ++D M+ A ND T+E + NAAVRS +FVT AVS+ TLP PE AFIGRSNVGKSSL+NM+CNRKALAYTSK PGKTQQFNYF++N + + F++VD+PGLGYAKVP+ RK W F+ Y+ ER LRV+FHL+D R GP+ QD I+ +M + R YV+VLTK DK+D + V+ A +Q+ +D + + P++ TS+ +RLGRD MWRYLRL
Sbjct: 263 PVSIELFNKLLKEFASARHLPALFHLMDVMSDTKAVANDITFEIVANAAVRSVDFVTSAVSMDTLPAPLIPEVAFIGRSNVGKSSLVNMLCNRKALAYTSKTPGKTQQFNYFVINEASNWNPKCDFHMVDLPGLGYAKVPQAVRKNWVEFMTQYLEEREPLRVVFHLMDARLGPVAQDEEIIRLMEQISTRERFQYVIVLTKVDKKDVNEKGTLVAMASVQRALDDSFGVEAASQIPIVATSSISRLGRDQMWRYLRL 520
BLAST of mRNA_S-ischiensis_contig8.19442.1 vs. uniprot
Match: A0A7S1EQV8_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQV8_9RHOD) HSP 1 Score: 236 bits (602), Expect = 3.070e-66 Identity = 131/291 (45.02%), Postives = 175/291 (60.14%), Query Frame = 1
Query: 136 NRLLRGFHKRRDLEGVFKVLDAMAAGGAEPNDETYEWIGNAAVRSAEFVTGAVSVATLPKAGYPEAAFIGRSNVGKSSLINMVCNRKALAYTSKRPGKTQQFNYFLMNNGTE----------------------------------------------NAFYLVDMPGLGYAKVPEKDRKRWAAFLRGYISERPTLRVLFHLVDGRHGPLDQDRAIMEMM-----RGLIASARYVVVLTKADKRDNS-VSRAVLQQTVDALREAGC-PRTPVLLTSANNRLGRDGMWRYLR 849
N ++R K L VF VLD M + ++ET+E++ NAAVR EFV G VS+ T+P PEA FIGRSNVGKSSL+NM RKALA+TSKRPGKTQQFNYF++N + AFYLVD PG+GYAKVP++ ++ W F+R ++S+ LRV+FHL+DGRHGP+D DR ++EM+ + L++S ++V+VLTK DK D S V V+QQTV AL+ G TP++ TS+ +++GRD MWRYLR
Sbjct: 231 NEVIRHLGKIGALNVVFDVLDVMNLANIQKDNETWEFLANAAVRRVEFVKGVVSMDTMPDQELPEAMFIGRSNVGKSSLVNMTVGRKALAHTSKRPGKTQQFNYFVVNGKKDAIEYKDKSVVKEQKKMSKRAMEKLRKNPNARGNLGRSERKEIKEDLKAFYLVDCPGVGYAKVPKEMQESWTRFIRDFLSKSSRLRVVFHLIDGRHGPMDDDRLLLEMVSDLKSKELMSSVQFVIVLTKVDKLDKSKVKSGVMQQTVQALKTVGLLESTPIISTSSQSKIGRDEMWRYLR 521 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19442.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19442.1 >prot_S-ischiensis_contig8.19442.1 ID=prot_S-ischiensis_contig8.19442.1|Name=mRNA_S-ischiensis_contig8.19442.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=256bp MAAGGAEPNDETYEWIGNAAVRSAEFVTGAVSVATLPKAGYPEAAFIGRSback to top mRNA from alignment at S-ischiensis_contig8:1481477..1488496- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig8.19442.1 ID=mRNA_S-ischiensis_contig8.19442.1|Name=mRNA_S-ischiensis_contig8.19442.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7020bp|location=Sequence derived from alignment at S-ischiensis_contig8:1481477..1488496- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig8:1481477..1488496- >mRNA_S-ischiensis_contig8.19442.1 ID=mRNA_S-ischiensis_contig8.19442.1|Name=mRNA_S-ischiensis_contig8.19442.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1536bp|location=Sequence derived from alignment at S-ischiensis_contig8:1481477..1488496- (Schizocladia ischiensis KU_0333)back to top |