prot_S-ischiensis_contig8.19435.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19435.1
Unique Nameprot_S-ischiensis_contig8.19435.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length76
Homology
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BLAST of mRNA_S-ischiensis_contig8.19435.1 vs. uniprot
Match: A0A6H5KRH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRH5_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 4.380e-16
Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 0 
Query:    5 GKRLDKGLRTFLMERVIKCPSIKSKYGFRSLVASGRSERMYTEELSRHTLRKVLDLVILLDRAK 68
            G R+D+ LRTF+ ER++KCP +K++YGFR  VASG SE  Y +EL RH L   LDLV+ LDRAK
Sbjct:  310 GGRVDRALRTFVAERLVKCPEMKARYGFRGRVASGASEVEYNDELGRHALTHFLDLVLFLDRAK 373
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BLAST of mRNA_S-ischiensis_contig8.19435.1 vs. uniprot
Match: D8LLN9_ECTSI (Similar to asp (Abnormal spindle)-like, microcephaly associated n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLN9_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 4.380e-16
Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 0 
Query:    5 GKRLDKGLRTFLMERVIKCPSIKSKYGFRSLVASGRSERMYTEELSRHTLRKVLDLVILLDRAK 68
            G R+D+ LRTF+ ER++KCP +K++YGFR  VASG SE  Y +EL RH L   LDLV+ LDRAK
Sbjct:  423 GGRVDRALRTFVAERLVKCPEMKARYGFRGRVASGASEVEYNDELGRHALTHFLDLVLFLDRAK 486
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19435.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRH5_9PHAE4.380e-1659.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLN9_ECTSI4.380e-1659.38Similar to asp (Abnormal spindle)-like, microcepha... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:1422878..1424270 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19435.1mRNA_S-ischiensis_contig8.19435.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 1422878..1424270 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19435.1 ID=prot_S-ischiensis_contig8.19435.1|Name=mRNA_S-ischiensis_contig8.19435.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=76bp
LPVEGKRLDKGLRTFLMERVIKCPSIKSKYGFRSLVASGRSERMYTEELS
RHTLRKVLDLVILLDRAKVRCCTLM*
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