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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 861 |
| Cds size | 762 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817261.9485784-UTR-S-ischiensis_contig8:2928858..2928957 | 1622817261.9485784-UTR-S-ischiensis_contig8:2928858..2928957 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 2928859..2928957 + |
| 1695740978.149632-UTR-S-ischiensis_contig8:2928858..2928957 | 1695740978.149632-UTR-S-ischiensis_contig8:2928858..2928957 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig8 2928859..2928957 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817261.9610224-CDS-S-ischiensis_contig8:2928957..2929509 | 1622817261.9610224-CDS-S-ischiensis_contig8:2928957..2929509 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2928958..2929509 + |
| 1695740978.160885-CDS-S-ischiensis_contig8:2928957..2929509 | 1695740978.160885-CDS-S-ischiensis_contig8:2928957..2929509 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2928958..2929509 + |
| 1622817261.9721048-CDS-S-ischiensis_contig8:2930031..2930123 | 1622817261.9721048-CDS-S-ischiensis_contig8:2930031..2930123 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2930032..2930123 + |
| 1695740978.1788867-CDS-S-ischiensis_contig8:2930031..2930123 | 1695740978.1788867-CDS-S-ischiensis_contig8:2930031..2930123 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2930032..2930123 + |
| 1622817261.983502-CDS-S-ischiensis_contig8:2930982..2931100 | 1622817261.983502-CDS-S-ischiensis_contig8:2930982..2931100 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2930983..2931100 + |
| 1695740978.1934962-CDS-S-ischiensis_contig8:2930982..2931100 | 1695740978.1934962-CDS-S-ischiensis_contig8:2930982..2931100 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig8 2930983..2931100 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19656.1 >prot_S-ischiensis_contig8.19656.1 ID=prot_S-ischiensis_contig8.19656.1|Name=mRNA_S-ischiensis_contig8.19656.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=254bp
MAPEPKSANAPPSRHADAGGQNKGVKYNTHVSDSGQRDNSDEEWTSVDDS
RESSLTEVSGGSVFYEEEESKEDAGSQTIEDHSEEEEEEEEDQEDDVDYS
LALGSPASEALRALRLVAAQPPETVMPPQTAAQGLEGILAALAQDGPNVR
EALGHAGACGLVVQVAQANRLDGAVQVAALEAMSRMCQGSYKNRLRFGEA
GGCLLPADAMMAMPRDATVARLACVAIAQLFRDEVAYALDPTAGARCQAN
LARL back to topmRNA from alignment at S-ischiensis_contig8:2928859..2931100+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig8.19656.1 ID=mRNA_S-ischiensis_contig8.19656.1|Name=mRNA_S-ischiensis_contig8.19656.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2242bp|location=Sequence derived from alignment at S-ischiensis_contig8:2928859..2931100+ (Schizocladia ischiensis KU_0333)
GGGGCGGTGTGCGGGGGGATAGCCCTAAGCCCGGCAATGCCAGCGGCAGC
GCTGTATGACTGGCAAAAGGGACAGCAACTTTCCTGACGGCGTCCATGGA
TGGCACCTGAACCGAAGAGCGCTAACGCACCCCCCTCACGCCACGCGGAC
GCGGGGGGGCAAAACAAGGGCGTAAAATACAACACGCATGTTTCCGACAG
CGGCCAGAGGGACAACTCGGACGAGGAGTGGACATCTGTGGACGATTCTC
GAGAATCGAGCCTCACGGAGGTATCAGGAGGAAGTGTTTTCTATGAGGAA
GAGGAGAGCAAGGAAGATGCAGGGAGCCAGACAATAGAGGACCACAGTGA
GGAGGAAGAAGAGGAGGAGGAGGACCAAGAGGACGATGTAGACTACAGTC
TTGCTCTCGGGTCTCCGGCCTCGGAAGCTCTACGGGCACTCCGACTTGTG
GCGGCCCAACCCCCCGAAACAGTTATGCCGCCGCAGACGGCAGCCCAGGG
CTTGGAGGGTATTCTGGCAGCCTTGGCTCAAGATGGCCCAAATGTCCGAG
AGGCGCTGGGTCACGCGGGGGCCTGTGGGCTTGTGGTGCAAGTCGCGCAA
GCAAACAGATTGGACGGGGCCGTACAGGTGGCTGCGCTCGAGGCAATGTC
GGTGAGGCAACGGTGTTTGTGTAGTACAACTACTCTATGTGTGGCTCAAG
TACTTAGCTCTGCATCCGCACACACTTTCACACATGCTTGGAAGTACAGA
GCACACCAAAACGACGCACCCCGACGTGTTCGAAGAACGCGCACCCCATG
CCGCTGGACGCCTGTGTGCGCCCCGCATTCATGTCTATGCCCACTGGGTG
TTGCCCGTCTTGGTGCACGTCCCTGAAGTACTCATATTTTTGCTTTGTTT
TTTTCTACACCTCACCTGCCGCCCAGCCCCCTTCTGCCCGCGGTGGCTGT
GGCTTGACAGCACATGCACAAGGGGCGCCAGCCCCACCATGTGCAAGTGC
GAGTGAAAGCAGAGGCTCTGGCGAGGTCCCAATTCTGGGACAGGACCCTG
AACTCGCCTGCTAATTTTTTCACGATGAGCCAATTTTCCCCAGCTGCGAC
GATTTGCCTTAGCATGTATGCTCATGGTCCCTCCCACCACCATTGTCCCG
GCCGTGGCTGCGGTACTTGACAGCGCATGTGTCAGGGTAGCTACAAAAAC
CGCCTCCGGTTCGGGGAGGCCGGGGGCTGCTTGCTGCCCGCGGACGCAAT
GATGGCTATGCCCAGGTACGGCGGACAAATACAAGTACTTGGCAGTGCTT
GCTCGAGTACAGTCCTCAGTACTCAGAGTTCACTTGAATATTGGCACCCC
GTACACGGAATGCACGGTTTATAAGTTGCTTCGTTCGCCCGATTGTCCGC
CCGAATACGTAATGCCCGTGTACTCCATGCGTGTGCATTAAGGCCTATTG
TTCATGTGCCGACCCTCCAACGAGGTCGAATGTGCGGAATATTATGGGTC
AGGGTTCCCGGATGCCGCTAAGCGCCACCCCAGACCATCGTAACCGTGCA
CTGAGTACACGGGTAGTTGCGCCGATGCCGGCTAACTCCGTGCACGGTTA
ACCCAGTGGTGGTATAGCACGGCGTGGAGTGCTTCGAAATTGAGCCCTCC
ACAGTACAGTATCAAGAGACGTCTTCTAAATCTTCCCGGCAAATCCGACT
ACAGTACTGGATGCCACCGCCGCCGCCACAACTCCCACCACCATCACCAC
CCCCACCGCCATCACTATCACCACCACCACCACCACCAAAACCACCACCA
CCAACATCACCACCACCACACCACCATCATCACCACCCCCTCCGCCACTA
GTAGACTCCACGACCACCACAACTGCCATCAACACCACCACCAACAGCAA
CACTACCGCCACCATCGCCTCCACCACCCCACCACCCCGCCCCCCAAACC
ACCACCACCACCACCACCATCACCAGCACCACCGCCACCAGCACCACCAC
CACCACCACCACCACCACCACCACCACCACCACCACCAACACCACCAACA
CCACCACCACCTACACCTACACCAACACCACTGCCACCGCCACCAACAAT
CCCTCCCCCCGCCGCCCCTCCCAGGGACGCGACCGTGGCACGGCTCGCCT
GTGTGGCCATCGCGCAGCTCTTTCGCGATGAGGTGGCCTACGCGTTGGAC
CCGACGGCAGGCGCCCGCTGCCAGGCCAACCTCGCGCGCCTC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig8:2928859..2931100+ >mRNA_S-ischiensis_contig8.19656.1 ID=mRNA_S-ischiensis_contig8.19656.1|Name=mRNA_S-ischiensis_contig8.19656.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1524bp|location=Sequence derived from alignment at S-ischiensis_contig8:2928859..2931100+ (Schizocladia ischiensis KU_0333)
ATGGCACCTGAACCGAAGAGCGCTAACGCACCCCCCTCACGCCACGCGGA
CGCGGGGGGGCAAAACAAGGGCGTAAAATACAACACGCATGTTTCCGACA
GCGGCCAGAGGGACAACTCGGACGAGGAGTGGACATCTGTGGACGATTCT
CGAGAATCGAGCCTCACGGAGGTATCAGGAGGAAGTGTTTTCTATGAGGA
AGAGGAGAGCAAGGAAGATGCAGGGAGCCAGACAATAGAGGACCACAGTG
AGGAGGAAGAAGAGGAGGAGGAGGACCAAGAGGACGATGTAGACTACAGT
CTTGCTCTCGGGTCTCCGGCCTCGGAAGCTCTACGGGCACTCCGACTTGT
GGCGGCCCAACCCCCCGAAACAGTTATGCCGCCGCAGACGGCAGCCCAGG
GCTTGGAGGGTATTCTGGCAGCCTTGGCTCAAGATGGCCCAAATGTCCGA
GAGGCGCTGGGTCACGCGGGGGCCTGTGGGCTTGTGGTGCAAGTCGCGCA
AGCAAACAGATTGGACGGGGCCGTACAGGTGGCTGCGCTCGAGGCAATGT
CGATGGCACCTGAACCGAAGAGCGCTAACGCACCCCCCTCACGCCACGCG
GACGCGGGGGGGCAAAACAAGGGCGTAAAATACAACACGCATGTTTCCGA
CAGCGGCCAGAGGGACAACTCGGACGAGGAGTGGACATCTGTGGACGATT
CTCGAGAATCGAGCCTCACGGAGGTATCAGGAGGAAGTGTTTTCTATGAG
GAAGAGGAGAGCAAGGAAGATGCAGGGAGCCAGACAATAGAGGACCACAG
TGAGGAGGAAGAAGAGGAGGAGGAGGACCAAGAGGACGATGTAGACTACA
GTCTTGCTCTCGGGTCTCCGGCCTCGGAAGCTCTACGGGCACTCCGACTT
GTGGCGGCCCAACCCCCCGAAACAGTTATGCCGCCGCAGACGGCAGCCCA
GGGCTTGGAGGGTATTCTGGCAGCCTTGGCTCAAGATGGCCCAAATGTCC
GAGAGGCGCTGGGTCACGCGGGGGCCTGTGGGCTTGTGGTGCAAGTCGCG
CAAGCAAACAGATTGGACGGGGCCGTACAGGTGGCTGCGCTCGAGGCAAT
GTCGCGCATGTGTCAGGGTAGCTACAAAAACCGCCTCCGGTTCGGGGAGG
CCGGGGGCTGCTTGCTGCCCGCGGACGCAATGATGGCTATGCCCAGCGCA
TGTGTCAGGGTAGCTACAAAAACCGCCTCCGGTTCGGGGAGGCCGGGGGC
TGCTTGCTGCCCGCGGACGCAATGATGGCTATGCCCAGGGACGCGACCGT
GGCACGGCTCGCCTGTGTGGCCATCGCGCAGCTCTTTCGCGATGAGGTGG
CCTACGCGTTGGACCCGACGGCAGGCGCCCGCTGCCAGGCCAACCTCGCG
CGCCTCGGACGCGACCGTGGCACGGCTCGCCTGTGTGGCCATCGCGCAGC
TCTTTCGCGATGAGGTGGCCTACGCGTTGGACCCGACGGCAGGCGCCCGC
TGCCAGGCCAACCTCGCGCGCCTC back to top
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