mRNA_S-ischiensis_contig76.18976.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig76.18976.1
Unique NamemRNA_S-ischiensis_contig76.18976.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig76.18976.1 vs. uniprot
Match: D8LNM0_ECTSI (Protein atp11, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNM0_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 1.980e-66
Identity = 103/178 (57.87%), Postives = 136/178 (76.40%), Query Frame = 1 
Query:  148 RSLSFSFPGPRRLADITNLPLLEKESPERVREIWQAYHDERKDTVGMALPGEDLLALRGRASRCPLFILPVFRENGYFMVVSQCQDSAFFLTFLEDYKQDPSAAAPYLTVGTFDDLVESKGLGLIRGDVTPNLTKKESERLMRLLLRYYSEAWYPTVEDFNLRPDNFNLEDFLARVPQ 681
            R LSFSFPGPR+L DITNLPLL KE  E + +IW AYHDER+D++G  +PG+ L  L+ +A +CP+F+LPV+R+ G+FM++SQ QD  F LT+LEDYK +P  A PY T+  ++DLV+SKGLGLIR D+TPNLTKKE +RL+RLL+R+YS   +  VE FNLRP  F+L+  L   P+
Sbjct:   49 RELSFSFPGPRKLEDITNLPLLAKEEKESIADIWTAYHDEREDSLGTVIPGDSLDGLQAKAKKCPMFVLPVWRDGGHFMMLSQYQDKCFLLTYLEDYKVNPGGAQPYATISMYNDLVDSKGLGLIRADITPNLTKKEVDRLVRLLIRFYSPHAHHHVEAFNLRPQEFDLDKLLQETPR 226
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BLAST of mRNA_S-ischiensis_contig76.18976.1 vs. uniprot
Match: A0A836CMH7_9STRA (ATP11 protein-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMH7_9STRA)

HSP 1 Score: 188 bits (477), Expect = 1.500e-51
Identity = 94/181 (51.93%), Postives = 122/181 (67.40%), Query Frame = 1 
Query:  148 RSLSFSFPGPRRLADITNLPLLEKESPERVREIWQAYHDERKDTVGMALPGEDLLALRGRASRCPLFILPVFR--ENGYFMVVSQCQDSAFFLTFLEDYKQDPSAAAPYLTVGTFDDLVESKGLGLIRGDVTPNLTKKESERLMRLLLRYY--SEAWYPTVEDFNLRPDNFNLEDFLARVP 678
            R LSFS+PGPR+L++ITNLPLLEKE P  V +IW+ +HD RKD +G  L G +L  L  RA   P+FI PV R  + GYFM++ Q Q S F LTFL+DY+ +PS A PY++V  F DL ESKG+GL+R DVT  L++ E  R++ L+ RYY  SE  Y  V  FN  P  FN E +++ VP
Sbjct:   49 RHLSFSYPGPRKLSEITNLPLLEKEEPAIVSDIWRQFHDARKDAIGATLSGAELQELLKRAKESPMFIFPVHRGADGGYFMLLCQFQGSHFLLTFLDDYRTNPSGAQPYMSVSLFSDLAESKGVGLVRADVTAQLSRAEGVRVLDLMQRYYIGSEELYGMVRAFNHAPAEFNFEVYMSTVP 229
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BLAST of mRNA_S-ischiensis_contig76.18976.1 vs. uniprot
Match: A0A7S2DR12_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DR12_9STRA)

HSP 1 Score: 163 bits (413), Expect = 4.670e-43
Identity = 88/203 (43.35%), Postives = 116/203 (57.14%), Query Frame = 1 
Query:   70 GAVGLRTSLSRLRQGIEPRSVNTGSTRSLSFSFPGPRRLADITNLPLLEKESPERVREIWQAYHDERKDTVGMALPGEDLLALRGRASRCPLFILPVFRENGYFMVVSQCQDSAFFLTFLEDYKQDPSAAAPYLTVGTFDDLVESKGLGLIRGDVTPNLTKKESERLMRLLLRYYSEAWYPTVEDFNLRPDNFNLEDFLARVP 678
            G   LRT  S  R+ +         +R LSFSFPGPRRLAD+  LPLL+ ES ERV EIW+ YH ++   +       +  + R  A +CPLFI PV R+ G+F+++SQ Q+    LT+LEDYK+DP AA PYLT+  FDD    KG+ L RGD+   L+  ES+RL+ L+  YY       V  FN     F+ E  L   P
Sbjct:    2 GMFALRTFPSLTRRSV---------SRPLSFSFPGPRRLADVVKLPLLQDESRERVEEIWRTYHSKQDTCIADVWEAGEYKSFRALAKKCPLFIFPVRRDKGHFVMLSQVQEQHVLLTYLEDYKKDPVAAVPYLTISLFDDFAADKGIVLARGDICNTLSLDESQRLLGLMKTYYGGPRQEDVRAFN--KGEFDFEAHLRDCP 193
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BLAST of mRNA_S-ischiensis_contig76.18976.1 vs. uniprot
Match: A0A485KLM8_9STRA (Aste57867_8902 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KLM8_9STRA)

HSP 1 Score: 162 bits (411), Expect = 9.780e-43
Identity = 85/192 (44.27%), Postives = 112/192 (58.33%), Query Frame = 1 
Query:  127 SVNTGSTRSLSFSFPGPRRLADITNLPLLEKESPERVREIWQAYHDERKDTVGMALPGEDLLALRGRASRCPLFILPVFR------ENGYFMVVSQCQDSAFFLTFLEDYKQDPSAAAPYLTVGTFDDLVESKGLGLIRGDVTPNLTKKESERLMRLLL-RYYSEAWYPTVEDFNLRPDNFNLEDFLARVPQ 681
            S +TG      F FP PR L  +  L  L+KESP+ +R IW  YH+E+ D +   L  +DL  L  RA +C  F+ PV+R      E G+F ++SQ QD  F LT L+ Y+++P+ A P LTV  FDDLVE+K L L+RGDV   L K E+  L+  LL RY     Y T+E FNLRP  FN + +LA   Q
Sbjct:    2 STSTGG----GFHFPSPRSLQSLVKLADLQKESPDAIRRIWSEYHEEKSDAMARVLTADDLKTLMERAKKCAFFVFPVYRVNKDTNETGFFTMLSQFQDKCFLLTTLDAYRENPAQAPPCLTVSLFDDLVETKELALVRGDVANLLDKPEASALLDALLQRYVDNTLYDTIEAFNLRPHEFNFDAYLAECKQ 189
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BLAST of mRNA_S-ischiensis_contig76.18976.1 vs. uniprot
Match: A0A6G0WAK2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAK2_9STRA)

HSP 1 Score: 160 bits (406), Expect = 5.560e-42
Identity = 84/188 (44.68%), Postives = 114/188 (60.64%), Query Frame = 1 
Query:  124 RSVNTGSTRSLSFSFPGPRRLADITNLPLLEKESPERVREIWQAYHDERKDTVGMALPGEDLLALRGRASRCPLFILPVFR------ENGYFMVVSQCQDSAFFLTFLEDYKQDPSAAAPYLTVGTFDDLVESKGLGLIRGDVTPNLTKKESERLM-RLLLRYYSEAWYPTVEDFNLRPDNFNLEDFL 666
            R+++TG      F FP PR L  +  L  LEKE+P+ +R IW  YHD++ D +G  L   +   L  RA +C  F+ PV+R      E GYF V+SQ QD  F LT L+ Y+++P+ A P LTV  FDDLV SK L LIRGDV   L K E+ +L+  L+ RY ++A Y TVE FNL+P  F+ + +L
Sbjct:    9 RAMSTGG-----FHFPSPRSLQSLVKLDELEKEAPDAIRRIWNDYHDDKTDAMGRVLTQNEFRTLVDRAKKCAFFVFPVYRVNKDTNEEGYFTVLSQFQDKCFLLTTLDAYRENPAQAPPCLTVSIFDDLVSSKELALIRGDVANLLDKDEASKLLDSLIQRYVNDAHYSTVESFNLKPQEFSFDAYL 191
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BLAST of mRNA_S-ischiensis_contig76.18976.1 vs. uniprot
Match: A0A024TLC0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TLC0_9STRA)

HSP 1 Score: 157 bits (396), Expect = 1.820e-40
Identity = 86/196 (43.88%), Postives = 115/196 (58.67%), Query Frame = 1 
Query:  103 LRQGIEPRSVNTGSTRSLSFSFPGPRRLADITNLPLLEKESPERVREIWQAYHDERKDTVGMALPGEDLLALRGRASRCPLFILPVFREN------GYFMVVSQCQDSAFFLTFLEDYKQDPSAAAPYLTVGTFDDLVESKGLGLIRGDVTPNLTKKE-SERLMRLLLRYYSEAWYPTVEDFNLRPDNFNLEDFLA 669
            ++ G   RS++T S     F FP PR L  +  L  LEKE+P+ +R IW  YHD + D +G +L    L  L  R  +C  F+ PV+R N      G+F ++SQ QD  F LT L+ Y+++PS A P LTV  +DDLV SK L L+RGDV   L K E SE L  LL RY  +  + TVE FNL+P +FN + +LA
Sbjct:    7 IQVGWTRRSLSTSSGGG--FHFPSPRSLQSLVKLDDLEKETPDAIRRIWGEYHDAKTDALGTSLTATQLDTLTARGKKCAFFVFPVYRTNAETKEEGFFTMLSQFQDKCFLLTTLDAYRENPSQAPPCLTVSIYDDLVSSKELALVRGDVANVLDKPEASELLTALLARYVDDDLFKTVEAFNLKPHDFNFDAYLA 200
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BLAST of mRNA_S-ischiensis_contig76.18976.1 vs. uniprot
Match: J9I9B8_9SPIT (Uncharacterized protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9I9B8_9SPIT)

HSP 1 Score: 154 bits (390), Expect = 1.630e-39
Identity = 74/175 (42.29%), Postives = 107/175 (61.14%), Query Frame = 1 
Query:  142 STRSLSFSFPGPRRLADITNLPLLEKESPERVREIWQAYHDERKDTVGMALPGEDLLALRGRASRCPLFILPVFRENGYFMVVSQCQDSAFFLTFLEDYKQDPSAAAPYLTVGTFDDLVESKGLGLIRGDVTPNLTKKESERLMRLLLR-YYSEAWYPTVEDFNLRPDNFNLEDF 663
            S R+ +F++P PR+L +I  + L EKE P ++ E+W  YH+ +   V   +  +  + L       P+FI PV +E GYFM++SQ Q  +F  T+LED+K++P AA PYL +  FD+LV SKG+ LIRGDV   LTK E E +M  LL  Y  ++ Y  V+ FN  P  FN E++
Sbjct:    8 SRRNFAFTYPCPRKLREIVRISLFEKEQPSKIEEVWNDYHNAKPHVVSKVITTQHYMQLLSNGQHSPMFIYPVPKEAGYFMLLSQNQQKSFIFTYLEDFKKNPLAANPYLVLTCFDELVRSKGIALIRGDVIGQLTKDEGETIMNKLLNSYLIDSQYERVKQFNHTPQQFNYEEY 182
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BLAST of mRNA_S-ischiensis_contig76.18976.1 vs. uniprot
Match: A0A7S4MVI2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MVI2_9STRA)

HSP 1 Score: 150 bits (379), Expect = 6.730e-38
Identity = 84/204 (41.18%), Postives = 119/204 (58.33%), Query Frame = 1 
Query:   91 SLSRLRQGIEPRSVNTG--------STRSLSFSFPGPRRLADITNLPLLEKESPERVREIWQAYHDERKDTVGMALPGEDLLALRGRASRCPLFILPVFRENGYFMVVSQCQD-SAFFLTFLEDYKQDPSAAAPYLTVGTFDDLVESKGLGLIRGDV-TPNLTKKESERLMRLLL-RYYSEAWYPTVEDFNLRPDNFNLEDFLA 669
            SLS   + I  R++           S RSLSFSF GPR+L +I    LLE +S   V +IW  YH+ +  T G+ + G+D L +  RA +CP F+ PVFR+ GYFM+VSQ Q  S F + +LEDYK DP+ A P LT   FDDL +   LGLIR D+    +   E  +++  +L  Y  +  Y  V+ FN  PD+F+L+D+++
Sbjct:    5 SLSHTARAISGRAIRQNVHCQVFDNSRRSLSFSFAGPRKLEEIMKTELLEGKSASEVSDIWMTYHEGKDKTHGLIMLGKDSLDVLERAKQCPYFVQPVFRDEGYFMLVSQFQGPSHFLMAYLEDYKMDPARAQPLLTFSVFDDLAKKLDLGLIRCDILNKGVEDDEGRKIVNSMLDAYKKDEEYFKVKAFNETPDSFDLDDYIS 208
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BLAST of mRNA_S-ischiensis_contig76.18976.1 vs. uniprot
Match: A0A078B7S6_STYLE (Atp11 protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078B7S6_STYLE)

HSP 1 Score: 149 bits (375), Expect = 1.920e-37
Identity = 71/179 (39.66%), Postives = 108/179 (60.34%), Query Frame = 1 
Query:  148 RSLSFSFPGPRRLADITNLPLLEKESPERVREIWQAYHDERKDTVGMALPGEDLLALRGRASRCPLFILPVFRENGYFMVVSQCQDSAFFLTFLEDYKQDPSAAAPYLTVGTFDDLVESKGLGLIRGDVTPNLTKKESERLMRLLLR-YYSEAWYPTVEDFNLRPDNFNLEDFLARVPQ 681
            R  SF++P PR+L +I  + L EKE+PE + EIW  YH+ +   +   +P    L L       P+FI PV ++ GYFM++SQ Q  +F  T+LED+K++P  A PYL +  FD+LV +KG+ LIRGDV   L K E++ ++  LL  Y  ++ + T++ FN +P  FN E++     Q
Sbjct:   10 RGFSFTYPCPRKLREIVKISLFEKETPEVISEIWDDYHNTKAHAISKVIPQSLYLRLLSNGQTSPMFIFPVPKDAGYFMLLSQNQQKSFIFTYLEDFKKNPLTANPYLVLTCFDELVRTKGVALIRGDVIGQLNKNEAKTVLEKLLNSYLIDSQFETIKQFNHQPQQFNYENYTQESLQ 188
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BLAST of mRNA_S-ischiensis_contig76.18976.1 vs. uniprot
Match: A0A7S2WHZ0_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WHZ0_9STRA)

HSP 1 Score: 148 bits (373), Expect = 1.970e-37
Identity = 78/174 (44.83%), Postives = 106/174 (60.92%), Query Frame = 1 
Query:  160 FSFPGPRRLADITNLPLLEKESPERVREIWQAYHDERKDTVGMALPGEDLLALRGRASRCPLFILPVFRENGYFMVVSQCQDSAFFLTFLEDYKQDPSAAAPYLTVGTFDDLVESKGLGLIRGDVTP-NLTKKESERLMRLLLRYYSEAWYPTVEDFNLRPDNFNLEDFLARVP 678
            FS+P PR+L ++  L L E+ES ERV EIW  YHD ++  +  A   +D  A+  R    PLFI PV R+ GYF+V+SQ Q      T+L+DY++DP+ A PYL V  +D+LV SKGL L+RGDVTP  L   E+ RL+ LL  +Y +  +  V+ FN    NF+ E  L   P
Sbjct:   26 FSYPAPRKLDEVVKLALFERESSERVEEIWTEYHDSKEFNIAEAWTEKDFRAVEERGRSAPLFIFPVRRDGGYFVVLSQVQGRHILFTYLDDYRRDPAGANPYLVVTLYDELVSSKGLVLVRGDVTPLALDAPEASRLLHLLREFYLDR-FDQVQAFNA--GNFDFEAHLRDCP 196
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig76.18976.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNM0_ECTSI1.980e-6657.87Protein atp11, mitochondrial n=2 Tax=Ectocarpus Ta... [more]
A0A836CMH7_9STRA1.500e-5151.93ATP11 protein-domain-containing protein (Fragment)... [more]
A0A7S2DR12_9STRA4.670e-4343.35Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A485KLM8_9STRA9.780e-4344.27Aste57867_8902 protein n=1 Tax=Aphanomyces stellat... [more]
A0A6G0WAK2_9STRA5.560e-4244.68Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A024TLC0_9STRA1.820e-4043.88Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
J9I9B8_9SPIT1.630e-3942.29Uncharacterized protein n=1 Tax=Oxytricha trifalla... [more]
A0A7S4MVI2_9STRA6.730e-3841.18Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A078B7S6_STYLE1.920e-3739.66Atp11 protein n=1 Tax=Stylonychia lemnae TaxID=594... [more]
A0A7S2WHZ0_9STRA1.970e-3744.83Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig76contigS-ischiensis_contig76:766295..772861 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score157.5
Seed ortholog evalue7.1e-36
Seed eggNOG ortholog157072.XP_008876516.1
Preferred nameATPAF1
KEGG rclassRC00003,RC00011,RC00055,RC00060,RC00092,RC00181,RC00496,RC00523,RC00948
KEGG koko:K01874,ko:K07555,ko:K11423,ko:K21888
KEGG TC1.A.12.2.1
KEGG ReactionR01108,R03522,R03659,R03875,R03938,R04773,R04866,R04867
KEGG Pathwayko00053,ko00310,ko00450,ko00480,ko00970,ko01100,map00053,map00310,map00450,map00480,map00970,map01100
KEGG ModuleM00359,M00360
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006996,GO:0007005,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0031974,GO:0033615,GO:0034622,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043461,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0051082,GO:0065003,GO:0070013,GO:0070071,GO:0071840
EggNOG free text desc.mitochondrial proton-transporting ATP synthase complex assembly
EggNOG OGsKOG3281@1,KOG3281@2759
EC1.8.5.1,2.1.1.43,2.5.1.18,6.1.1.10
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko02000,ko03016,ko03029,ko03036
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionProtein atp11, mitochondrial precursor
Ec32 orthologEc-08_006630.1
Exons7
Model size2052
Cds size666
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817229.3324618-UTR-S-ischiensis_contig76:766294..7663151622817229.3324618-UTR-S-ischiensis_contig76:766294..766315Schizocladia ischiensis KU_0333UTRS-ischiensis_contig76 766295..766315 +
1695740952.942868-UTR-S-ischiensis_contig76:766294..7663151695740952.942868-UTR-S-ischiensis_contig76:766294..766315Schizocladia ischiensis KU_0333UTRS-ischiensis_contig76 766295..766315 +
1622817229.4341125-UTR-S-ischiensis_contig76:771496..7728611622817229.4341125-UTR-S-ischiensis_contig76:771496..772861Schizocladia ischiensis KU_0333UTRS-ischiensis_contig76 771497..772861 +
1695740953.0277524-UTR-S-ischiensis_contig76:771496..7728611695740953.0277524-UTR-S-ischiensis_contig76:771496..772861Schizocladia ischiensis KU_0333UTRS-ischiensis_contig76 771497..772861 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817229.344883-CDS-S-ischiensis_contig76:766315..7663581622817229.344883-CDS-S-ischiensis_contig76:766315..766358Schizocladia ischiensis KU_0333CDSS-ischiensis_contig76 766316..766358 +
1695740952.9541612-CDS-S-ischiensis_contig76:766315..7663581695740952.9541612-CDS-S-ischiensis_contig76:766315..766358Schizocladia ischiensis KU_0333CDSS-ischiensis_contig76 766316..766358 +
1622817229.3562045-CDS-S-ischiensis_contig76:766484..7666391622817229.3562045-CDS-S-ischiensis_contig76:766484..766639Schizocladia ischiensis KU_0333CDSS-ischiensis_contig76 766485..766639 +
1695740952.9624655-CDS-S-ischiensis_contig76:766484..7666391695740952.9624655-CDS-S-ischiensis_contig76:766484..766639Schizocladia ischiensis KU_0333CDSS-ischiensis_contig76 766485..766639 +
1622817229.3667734-CDS-S-ischiensis_contig76:767457..7675761622817229.3667734-CDS-S-ischiensis_contig76:767457..767576Schizocladia ischiensis KU_0333CDSS-ischiensis_contig76 767458..767576 +
1695740952.9740818-CDS-S-ischiensis_contig76:767457..7675761695740952.9740818-CDS-S-ischiensis_contig76:767457..767576Schizocladia ischiensis KU_0333CDSS-ischiensis_contig76 767458..767576 +
1622817229.377259-CDS-S-ischiensis_contig76:768589..7686831622817229.377259-CDS-S-ischiensis_contig76:768589..768683Schizocladia ischiensis KU_0333CDSS-ischiensis_contig76 768590..768683 +
1695740952.9846232-CDS-S-ischiensis_contig76:768589..7686831695740952.9846232-CDS-S-ischiensis_contig76:768589..768683Schizocladia ischiensis KU_0333CDSS-ischiensis_contig76 768590..768683 +
1622817229.3949459-CDS-S-ischiensis_contig76:769205..7693281622817229.3949459-CDS-S-ischiensis_contig76:769205..769328Schizocladia ischiensis KU_0333CDSS-ischiensis_contig76 769206..769328 +
1695740952.9964414-CDS-S-ischiensis_contig76:769205..7693281695740952.9964414-CDS-S-ischiensis_contig76:769205..769328Schizocladia ischiensis KU_0333CDSS-ischiensis_contig76 769206..769328 +
1622817229.4066057-CDS-S-ischiensis_contig76:770167..7702841622817229.4066057-CDS-S-ischiensis_contig76:770167..770284Schizocladia ischiensis KU_0333CDSS-ischiensis_contig76 770168..770284 +
1695740953.0076816-CDS-S-ischiensis_contig76:770167..7702841695740953.0076816-CDS-S-ischiensis_contig76:770167..770284Schizocladia ischiensis KU_0333CDSS-ischiensis_contig76 770168..770284 +
1622817229.418405-CDS-S-ischiensis_contig76:771481..7714961622817229.418405-CDS-S-ischiensis_contig76:771481..771496Schizocladia ischiensis KU_0333CDSS-ischiensis_contig76 771482..771496 +
1695740953.0182574-CDS-S-ischiensis_contig76:771481..7714961695740953.0182574-CDS-S-ischiensis_contig76:771481..771496Schizocladia ischiensis KU_0333CDSS-ischiensis_contig76 771482..771496 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig76.18976.1prot_S-ischiensis_contig76.18976.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig76 766316..771496 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig76.18976.1

>prot_S-ischiensis_contig76.18976.1 ID=prot_S-ischiensis_contig76.18976.1|Name=mRNA_S-ischiensis_contig76.18976.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=222bp
MLSCTRSLARWGTLGRGAVGLRTSLSRLRQGIEPRSVNTGSTRSLSFSFP
GPRRLADITNLPLLEKESPERVREIWQAYHDERKDTVGMALPGEDLLALR
GRASRCPLFILPVFRENGYFMVVSQCQDSAFFLTFLEDYKQDPSAAAPYL
TVGTFDDLVESKGLGLIRGDVTPNLTKKESERLMRLLLRYYSEAWYPTVE
DFNLRPDNFNLEDFLARVPQT*
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mRNA from alignment at S-ischiensis_contig76:766295..772861+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig76.18976.1 ID=mRNA_S-ischiensis_contig76.18976.1|Name=mRNA_S-ischiensis_contig76.18976.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=6567bp|location=Sequence derived from alignment at S-ischiensis_contig76:766295..772861+ (Schizocladia ischiensis KU_0333)
TGGCACACGGAGCTTGGCGCGATGCTGTCTTGCACACGGAGCTTGGCACG
ATGGGGCACGTTGGGTAAGTGTCCCTGCTGCACCTGGAGGATTGCTTGTT
CGCCCAGACGATCACATCCCAACTGATTTGCACCTGTGCGTGGATGGTTG
TGGACGCTTGTGCTCATATCATTTGTCCCTTTCTCCACAGGACGCGGCGC
TGTCGGGTTGCGCACGTCGCTGTCGCGCCTGAGGCAAGGGATCGAGCCAC
GTTCGGTGAACACGGGCTCCACAAGAAGCCTGAGCTTCTCCTTCCCCGGG
CCGCGCCGCCTAGCAGACATCACGAACCTCCCGTTGCTCGAGAAGGTTAG
TGTGCCTCTGCTGAACGGCTGGGGTCGCCCGGGCACTTCTCCCCTGGCTT
GCGTATGCGTTGCGCGTGGTGGAGTGCGGCGGAGCTCGCGTTGATCGTTG
GACGAGGCTTGCGTGTGCGTTGCGTGTGGTGGAGTGCGGTGGAGCTCGCG
TCGATCGTTGGACCAGGCCCCCCAGAGACTCGCAGGGAGAGCCCCCATTG
CTTGTGCTTTGAAGTACCCCAACACGAGCATGTTGGCACTCGTACTTCGA
AGTACTAAACTTCAGTACGGCGCGCAACTCATGAGCACCCCACCCAGATG
AAACGGTTTAACTACGTGATGTGATGTGATGTGACATTTGCTGTGACTAC
TATACTTTGACATCGCATCACATCCCATGAGTACCCCCTCCCACTCTGGC
TCTGCCACCTGGGGGAGGCAGGGGTGCTCCGTCTCAACCGAAGCGCGTGG
TCAATTGTCTCGGGACGACGGCAAGCACCACGTGAGTACGTATATATGAG
TACCCCCCCTCCCCAATGCGGACCGCACTCCCCTACATCCAGTGATGGAA
TATCTAAGCAGATCAACCTATTTATCGACAGTACTGATCCATACATCTAT
CGATAGTCGATATTCCATAGTTTGACCCACACTAAATCCAAGTATTAACA
GGAACAACACGGGGCGAGGTGCGGGCCATGTCACTAGAGACCTCAGCAGT
GGCCCTTCCTTAGCTCCAATCCAAGTAGTTAGTAGCGCCACCCACAAAAT
CAGTCGAGCCCGATAGCTATATACTGATCGATATTCCATCACTGCCCTCC
CCACGCCTCCCAGGAGTCACCCGAGCGGGTACGGGAGATTTGGCAGGCGT
ACCATGATGAGCGTAAGGACACAGTGGGGATGGCTCTGCCAGGGGAAGAC
CTGCTCGCGCTTAGGGGGCGGGCCAGCCGATGGTGCGCGTGCGCGCGTGT
GTGTGTGTGTGTGTGTTTGATGTGATGTGATGTGATGTGTACACAAAAGC
ACTGTAGTTTGACATCACATCACATCACAAAAGTCATTGGTGTGTGTGTG
TGTGCGTGTGTGGGATGTGGTGTAGGGGGCGAGCCAGCTGATGGTGTGTG
TGTGTGTGTGTGATGTGATGTGGTGTGGTGCAGTGATGGAATATCGATCG
GTAGATAGCTATCGGGCTCGACTGATTTGGGTGGCGTTACTATTAACTTG
CTAACTACTTGGATTGAGGTCTGTAGTGAAGTGGCCTGCACCTCGCCCCG
TGTTGTACTTGGATTGAGTGTGGGTCAAACTATCGAATATCGAATATCGA
TAGATATATCGATCAGTGCTGTCTATAAATAGGTTGAGTTGCTTAGATAT
TCCATTCACTGGTGTGGTGCGGTGTGGTGTGTGCTCGAGTACACACGAGG
AGTGTGCTGCGGTAGCGGTTTGACATCGCATCACGTCACACGAGATCATC
GCGCTGTGTGTGTGTATATGTGTATGTGACGTGATGTTCTGTTTACACCC
GAAGACTGCACTACTGGTGCCATGTAGTACAGTAGTATTGTACTCATAGA
TTGAGGAGGAGGAGGAGGAGGAAGGGGAGGGGGGGGGGGAGGAAGTAGTG
CTATGCACAGGTGTGATTCACATTGATGGCGCGCGTGATTCTTTCGCTGC
AGTACAAGCTAACGTACGACATTACACACAGAGAGATAGAGACGGAGACA
GACACACACCCCGCGTCACCCCCCCCTTTTTGGTTTTAATTCTTGATGTA
ATAATGACTAGAGCTCTACAATAATACGAGAACACTCAATTCTTAACTGG
GACAACCGCTAGTACGAGAACACTCAATCTCACACACGTGCGATTGTACC
TCCTTACAGTTTTTATGATCACCCCCAAACCCCCTCCCTGCCCTCCCCGC
CCCGCCGCTTCCACCCTTGCCCGCTGCCACCCCGTGCGATAGCAGCCCGT
TGTTTATTCTCCCCGTGTTCAGGGAGAACGGGTATTTCATGGTGGTGTCG
CAGTGCCAGGACTCGGCCTTCTTCCTCACTTTCTTGGAGGTGAGTTGTGA
TATGATGTGATGTGATGTGGTGTGGTGTGGTGTGGTGTGATTTGGTGTGG
TGTGGCGTGGTGTGAGTTGGTGTGATGTGAGTTGTGATATGATTTGATGC
GATGCGATGTGATGTGATGTGACGTGATGTGATGTGATGCGATGTGAGGT
GAGTTGTGATATGAAGTGATGCGATGGTGGTGTGGTGTGGTGTGGTGTGG
TGTGGTGTGGTGTGATGTGATGTGGTGTGGTGTGGTGTGGTGTGATTTGA
TGTGATGTGATGTGGTGTGGTGTGATGTGATTTGATGTGAGGTGATGTGA
TCTGATGCGATGTGATGTGATGTGACATGATGTGATGTGATGTGATGCGA
TGCGATGCGATGTGATGTGATGTGACGTGTGTGATGTGATGTGATGCGCT
GTGACGTGATGTGATGTGATGCAGTGTGATGGGATGTGATACGATGTGAT
GTGACGTGATGTGCAGTGATGTGACGTGACGTGATGTGATGCGATGTGAT
GCGATGCGCAGGACTATAAGCAGGACCCTTCAGCAGCGGCGCCCTACCTG
ACGGTGGGCACCTTTGACGACCTTGTGGAGAGCAAGGGTCTGGGCCTGAT
CCGGGGGGACGTGACGCCCAACCTCACCAAAAAGGTGCGATGATTCTTTC
TTCCAAGCACGCCGGAAAGGTGCCAAATACCACTACTGTACTGTAGTACG
AGAACACTCAGCTCTGAAATGTGATAGCCACTAATACGAGAACACTCAAT
CTCACACACGTGCAATTGTACGAGTACCTCGTTACAATTTACATATATAT
CACATGCCAATAAAGGTGCCATGCTTGAAAGCACGTCCGTACTTGGCCGT
GCTCGCGCTTTGCACGATGTCACCGAGAAGATGCCACGCTGGGAACCGTG
TCGAGTAGGTACTCATGCATGTACCTCTCGCAACTAGCAGTGCCTGCAAG
TACTCACGCCTAACAGTGCTTGCGTGTCCTCACAACTAGCAGTGCCTGCA
AGTACTCACGCCTAACAGTGTGTGCGTGTCCTCGCACCTAACAGTGCTTG
CATGTCCTCACACCTAACATTGCTTGCATGTCCTCACACCTAACAGTGCT
TGCAAGTCCTCACACCCAACAGTGCTTGCATGCCCTCACACCAAACAGTG
CTTGCATGTCCTCACACCTAACAGTGCCTGCATGTCCTCACACCAAACAG
TGCTTGCATGTCCTCACACCTAACAGTGCTTGCATGTCCTCACACCTAAC
AGTGCTTGCATGTGCTCACACGCAACAGTGCTTGCATATCCTCACACCTA
ACAGTGCCCGCACGTACTCACACCTAACTCCTTGCAGGAGTCGGAGCGCC
TGATGAGGCTCCTGCTGCGCTACTCCTCCGAGGCGTGGTACCCTTTCCCA
GTGTCTCCCTCCTTCCCTCCCTCCCTCCCTCCACCCTCTCTCCCCGCCAC
CCTCCCTTCCTCCCTCCACGCAGGAGTCGGAGCGCCTGATGAGGCTGCTG
CTGCGGTACTACTCGGAGGCGTGGTACCCCACCGTGGAGGACTTCAACCT
GCGCCCGGACAACTTCAACCTCGAGGACTTCCTGGCCAGGGTGAGACTTT
TTTGTGTCTTTGATGTGAAAGCCGCCAATACGAGAACACCCAAATCTCAC
ACACTTGCGATTGTACCTCGTTTCAATCTATATTATGAATCACTACCCTA
TGGTACACGCGTGATTGTGAGACGACTGAAATTCCAGCTAGGGGACTTGC
TCGCCAGTGTGAGACTACTTACGGCACAGTCCGTGATAAGTACTATATGT
GATTGTGAGACAACTGACCCCGGCTTCTTGCACCCCCGAGCTCTAAGGAG
AAATTCGACCGGGAGAAATTCCTGGCCAGCGTGAGCAGGGTTGGCACTTA
CTTCGAAGTAACCTCTAAGTGGTGCCTTTCTTAGGCCGTAAATTAGAGGA
AATTTGGGGTAACTAGACCTGAAATGAGGGGTAGTTAGGAGGATTTCAAC
CTGCGGCCGAAGAAATTCAACCTGGAGGACTTCCTCGCCCGTGTGAGGCT
ACGGCAGTGATGGAATATATGTACTCATTGGTTTGTCTTGCGACATAACC
ATGCGTGCAATGCCGGCAGCCCAAAGTCAAAACTTCGGGCTTGCCCTCCA
ATAAAATAAAATGAATATCTAAGCAAATCGACCTGTTTATCGACAGTACT
GATCTATACATCTATCGATATTGTCGTCGATATTCGATAGTTTGACCCGC
ACTAAATCCAAGTAGCTGGTACCCCACCGTGGAGGACTTCAACCTGCGGC
CGGAGAAATTCAACCTCGAGGACTTCCGGGCCAGTGTGAGACTACGGTAT
ACTTGGAAGTAGTCGGTGATATGTAGTAGTATGTGATTATATATGAGTGT
ATGCTCACATTGTGCTTGCCATAGTCCCGAGACCGTTGTGATTGTGGGAG
AAATTCCAGCTGGAGGACGTCCTGGCCAGGGTGAGACTACAAGACGGTAC
AGTCGGTGATTCGTATGTAGGTTGCACCTCGTAAGGAGGTACAATCGCAC
GTGTGTGAGGTTGAGTGTTCTCGTATTACAGTATTAACAGGAACAACACG
GGGCGAGGTGCGGGCCACGTCACTAGAGACTTCAGCAGTGGCCCTGTCTT
AGCTCGCCAGGGGAAATTTGTGCAGGGAGGGCGAGAAGAGGAGGAGGGGT
AGTCAAACTACATTACATTAGAGTACACACATCACATCACATCACATCAG
TGTCCCCCCCCCCGACCCTTTCCCGCGCCTACTGTAGGTGCCCCAGACTT
GACATGGCAGCCTGTGGAAAGCCTTACAATAGCCCTGGCGGACAAGGGCA
GGCACCGTACACTCAGTGTGCAGTACCGTGGACTTTGGTGAGGAAAGGCT
GTACTGACCGGGAGCACGGTTGGCACTTGACCCCTAAGTGGTGCCCTCGT
AGGCCCTTGATTGGAGTTAGTTAGGGGCAATTAGACAGAAACTGGAGGAT
AAATAGGCCATAATTAACCTCTAAGTGCCAACCGTGGACTGTAGCGTAAG
TAGTGCGCCATTGTCCGCTCAGGCCTCACCTGGGGCTAGTGGGGCGCCTC
TGTTTGCTGCGAGGACCTCCAGTAGCTGTGGCGCGCTGCCTGACCCGTGG
CGGACAACGGTATGCACGAGTATACCGCAGCTGCTGCAGACCACGGGCAT
TTGGTGAAGTGCTTCTGTACTGTCGTGTACTTTGAAGTGCTTCAAAGTAG
TAGACTGTACCCTACAGCGGACCATGGACCACGGGCTTTACAGGTGAAGT
TTTGGGTGTACTGTCGTGTACTTGGAAGGACTAATTGCAGACTGCCATCC
TCTCAGGGCTGATGGGGGACCTCTGTTTGCTGTGGGGACCCCTGTTTGCT
GTGGGGACCCCTGTTTGCTGTGGGAACCTTTGTTTGCTGTGGGGACCTCT
GTTTGCCGCCGGGACCTCTGATTGCTTGGGAGACCTATGTTTGCTGTGGG
GACCCCTGTTTGGTGTGGGGACCCATGTTCGCTGTGGGGACATCTGTTTG
CCGTCGGGACCCCTGTTAAGGTACCTTCAGCACCCCGCCTGACCCTTGGC
GGACGACCGTGGCACTGTAGTAGAGTAGAACGCTGGCAGTTCACGCGCCG
GGGATATACGGCCCTTTAAAAACGGGCCAGCTCCGTCCCGCCCCCCCCGT
CCCATAGCTGGGCCCAGAAGCCAGGCCCGGGCCTCGTGAACCTGAAGGGG
CGCAGATTTTTGACACCAGTGATGGAATATATAAGCAAATCAATCTATTT
GTCGACAACACTGATCTATTTTGAGTCTATCGATATTCGATATTCGATAG
TTTGACCCGCGCCAAACCCGAGTACTTAGTCAGTAACGCATCCCAAAAGA
TCAGTCGTCGAGGGCTCCCGATAACTATCTACTGATAGATATTCCATCGC
TGTTTTGACACGCGCTGGGCCGGGCCGACTCAGAAGAGCCTGAGCAAAGC
CGTGTACCGGAGTACGTGCAATTCATTTTGTTCGCGTGCAAAAAGACGAC
CAAGCGGGCGGGAAAGAAGAGGTGTCCCTGGCATGTACGTTTTGTCGGAG
CACTCGAGTGCATCACATTGGATTGACGTCCTTGTTACAATAAATATCAA
TTGTCGTCTCGCCTCCT
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Coding sequence (CDS) from alignment at S-ischiensis_contig76:766295..772861+

>mRNA_S-ischiensis_contig76.18976.1 ID=mRNA_S-ischiensis_contig76.18976.1|Name=mRNA_S-ischiensis_contig76.18976.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1332bp|location=Sequence derived from alignment at S-ischiensis_contig76:766295..772861+ (Schizocladia ischiensis KU_0333)
ATGCTGTCTTGCACACGGAGCTTGGCACGATGGGGCACGTTGGATGCTGT
CTTGCACACGGAGCTTGGCACGATGGGGCACGTTGGGACGCGGCGCTGTC
GGGTTGCGCACGTCGCTGTCGCGCCTGAGGCAAGGGATCGAGCCACGTTC
GGTGAACACGGGCTCCACAAGAAGCCTGAGCTTCTCCTTCCCCGGGCCGC
GCCGCCTAGCAGACATCACGAACCTCCCGTTGCTCGAGAAGGACGCGGCG
CTGTCGGGTTGCGCACGTCGCTGTCGCGCCTGAGGCAAGGGATCGAGCCA
CGTTCGGTGAACACGGGCTCCACAAGAAGCCTGAGCTTCTCCTTCCCCGG
GCCGCGCCGCCTAGCAGACATCACGAACCTCCCGTTGCTCGAGAAGGAGT
CACCCGAGCGGGTACGGGAGATTTGGCAGGCGTACCATGATGAGCGTAAG
GACACAGTGGGGATGGCTCTGCCAGGGGAAGACCTGCTCGCGCTTAGGGG
GCGGGCCAGCCGATGGAGTCACCCGAGCGGGTACGGGAGATTTGGCAGGC
GTACCATGATGAGCGTAAGGACACAGTGGGGATGGCTCTGCCAGGGGAAG
ACCTGCTCGCGCTTAGGGGGCGGGCCAGCCGATGCCCGTTGTTTATTCTC
CCCGTGTTCAGGGAGAACGGGTATTTCATGGTGGTGTCGCAGTGCCAGGA
CTCGGCCTTCTTCCTCACTTTCTTGGAGCCCGTTGTTTATTCTCCCCGTG
TTCAGGGAGAACGGGTATTTCATGGTGGTGTCGCAGTGCCAGGACTCGGC
CTTCTTCCTCACTTTCTTGGAGGACTATAAGCAGGACCCTTCAGCAGCGG
CGCCCTACCTGACGGTGGGCACCTTTGACGACCTTGTGGAGAGCAAGGGT
CTGGGCCTGATCCGGGGGGACGTGACGCCCAACCTCACCAAAAAGGACTA
TAAGCAGGACCCTTCAGCAGCGGCGCCCTACCTGACGGTGGGCACCTTTG
ACGACCTTGTGGAGAGCAAGGGTCTGGGCCTGATCCGGGGGGACGTGACG
CCCAACCTCACCAAAAAGGAGTCGGAGCGCCTGATGAGGCTGCTGCTGCG
GTACTACTCGGAGGCGTGGTACCCCACCGTGGAGGACTTCAACCTGCGCC
CGGACAACTTCAACCTCGAGGACTTCCTGGCCAGGGAGTCGGAGCGCCTG
ATGAGGCTGCTGCTGCGGTACTACTCGGAGGCGTGGTACCCCACCGTGGA
GGACTTCAACCTGCGCCCGGACAACTTCAACCTCGAGGACTTCCTGGCCA
GGGTGCCCCAGACTTGAGTGCCCCAGACTTGA
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