prot_S-ischiensis_contig76.18975.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig76.18975.1
Unique Nameprot_S-ischiensis_contig76.18975.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length207
Homology
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BLAST of mRNA_S-ischiensis_contig76.18975.1 vs. uniprot
Match: D7G263_ECTSI (Chaperone protein dnaJ-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G263_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 1.600e-22
Identity = 57/109 (52.29%), Postives = 74/109 (67.89%), Query Frame = 0 
Query:   98 VSEGLGKGAPSRKQRLKMQAEMLDIRWNMAKMANEPRGTPSVACRACVGTGAXXXXXXXXXXQLKLRGRAVRVD---GQAQSCPVCRGEGREACARCHGVGRIAPWLMK 203
            +SEGLGKG PS ++RL++Q E LD+RWNM++ AN+     +V CR C G G   XXXXXXX   K+ G  + VD   G+   CPVC G+G E C+RC+G+GRIA WL K
Sbjct:  183 ISEGLGKGVPSPRERLRLQQENLDMRWNMSRKANQ-----TVCCRQCAGEGVVEXXXXXXXGMFKI-GSELMVDPASGRPPPCPVCSGKGEEVCSRCNGIGRIASWLFK 285
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig76.18975.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G263_ECTSI1.600e-2252.29Chaperone protein dnaJ-related n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15852FAMILY NOT NAMEDcoord: 134..200
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..206
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
IPR036410Heat shock protein DnaJ, cysteine-rich domain superfamilySUPERFAMILY57938DnaJ/Hsp40 cysteine-rich domaincoord: 137..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig76contigS-ischiensis_contig76:762244..766011 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig76.18975.1mRNA_S-ischiensis_contig76.18975.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig76 761880..766077 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig76.18975.1 ID=prot_S-ischiensis_contig76.18975.1|Name=mRNA_S-ischiensis_contig76.18975.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=207bp
MIGPLTAYALVVVPCYAFVGFPAHRGSSSWAPAGSPLRNQLSGPAVGRPL
SPRRGLLLQANLGGLEDEDDDELDQGARASAGWIRPQDMKVGSKGAVVSE
GLGKGAPSRKQRLKMQAEMLDIRWNMAKMANEPRGTPSVACRACVGTGAC
DCRFCTGTGQLKLRGRAVRVDGQAQSCPVCRGEGREACARCHGVGRIAPW
LMKQRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036410HSP_DnaJ_Cys-rich_dom_sf