prot_S-ischiensis_contig74.18795.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-ischiensis_contig74.18795.1
Unique Name	prot_S-ischiensis_contig74.18795.1
Type	polypeptide
Organism	Schizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length	115

Homology

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BLAST of mRNA_S-ischiensis_contig74.18795.1 vs. uniprot
Match: UPI001E1DD71D (mitochondrial Rho GTPase 1-like isoform X1 n=2 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DD71D)

HSP 1 Score: 62.8 bits (151), Expect = 4.220e-9
Identity = 35/84 (41.67%), Postives = 47/84 (55.95%), Query Frame = 0

Query:    7 QVETPWKVLRKHCYDDNLDLQLPPEVLQPPQGLGADQACELSPEALSFLRATFRQFDRDRDGLLLLDEARQAFAANPDPACAPW 90
            ++ETPW VLRK  YDDNL L+   ++L P   +G     ELS E + FL   F+++D DRDG+L   E    F+  P     PW
Sbjct:  269 RIETPWTVLRKFGYDDNLLLRN--DILAPKLNVGVGSTTELSYEGVQFLTRLFQKYDEDRDGILSPTELTNLFSTCP---MLPW 347

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BLAST of mRNA_S-ischiensis_contig74.18795.1 vs. uniprot
Match: A0A5D6Y0D8_9STRA (Mitochondrial Rho GTPase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0D8_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 7.870e-9
Identity = 33/83 (39.76%), Postives = 51/83 (61.45%), Query Frame = 0

Query:    9 ETPWKVLRKHCYDDNLDLQLPPEVLQPPQGLGADQACELSPEALSFLRATFRQFDRDRDGLLLLDEARQAFAANPDPACAPWE 91
            E+ W+VLR   Y++ LDL++PPE +  P     DQ+ +L+P+A+ F+   FRQFD ++DG L ++E    F+   D    PWE
Sbjct:  305 ESCWQVLRSLGYNNELDLEIPPERIGLPP-FEEDQSAQLTPQAIGFVTNLFRQFDANKDGSLRVEEIEDIFSICEDEQ-PPWE 385

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BLAST of mRNA_S-ischiensis_contig74.18795.1 vs. uniprot
Match: A0A0D9V7P6_9ORYZ (Mitochondrial Rho GTPase n=2 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9V7P6_9ORYZ)

HSP 1 Score: 61.2 bits (147), Expect = 1.460e-8
Identity = 36/84 (42.86%), Postives = 45/84 (53.57%), Query Frame = 0

Query:    7 QVETPWKVLRKHCYDDNLDLQLPPEVLQPPQGLGADQACELSPEALSFLRATFRQFDRDRDGLLLLDEARQAFAANPDPACAPW 90
            Q+ETPW VLRK  YD+ L L+   + L P      DQ  EL+ +A+ FLR  F  FD D DG LL  E    F+  P+    PW
Sbjct:  273 QLETPWTVLRKFGYDNELKLR---DDLLPAIKRAPDQTLELTSKAIDFLRGIFNMFDTDNDGALLPAEIEDLFSTAPEN---PW 350

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BLAST of mRNA_S-ischiensis_contig74.18795.1 vs. uniprot
Match: A0A1Z5JY32_FISSO (Mitochondrial Rho GTPase 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JY32_FISSO)

HSP 1 Score: 60.8 bits (146), Expect = 2.010e-8
Identity = 33/88 (37.50%), Postives = 47/88 (53.41%), Query Frame = 0

Query:    7 QVETPWKVLRKHCYDDNLDLQLPPEVLQPPQGLGADQACELSPEALSFLRATFRQFDRDRDGLLLLDEARQAFAANPDPACAPWELPR 94
            +++  WK LR   YDDNL L +PP++              LSP A  FL A F+QFD ++DG+L  D+    F+  P+P+  PW   R
Sbjct:  271 RLDVVWKALRHFGYDDNLQLDIPPDL---------PITKRLSPHAKRFLTALFQQFDTNQDGVLSGDDLWLIFSILPNPSLPPWHRQR 349

The following BLAST results are available for this feature:

BLAST of mRNA_S-ischiensis_contig74.18795.1 vs. uniprot

BLAST of mRNA_S-ischiensis_contig74.18795.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
UPI001E1DD71D	4.220e-9	41.67	mitochondrial Rho GTPase 1-like isoform X1 n=2 Tax...	[more]
A0A5D6Y0D8_9STRA	7.870e-9	39.76	Mitochondrial Rho GTPase n=1 Tax=Pythium brassicum...	[more]
A0A0D9V7P6_9ORYZ	1.460e-8	42.86	Mitochondrial Rho GTPase n=2 Tax=Leersia perrieri ...	[more]
A0A1Z5JY32_FISSO	2.010e-8	37.50	Mitochondrial Rho GTPase 1 n=2 Tax=Fistulifera sol...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013567	EF hand associated, type-2	PFAM	PF08356	EF_assoc_2	coord: 8..51 e-value: 2.9E-6 score: 27.2
None	No IPR available	GENE3D	1.10.238.10		coord: 29..104 e-value: 3.0E-10 score: 41.8
None	No IPR available	PANTHER	PTHR24072	RHO FAMILY GTPASE	coord: 8..91
None	No IPR available	PANTHER	PTHR24072:SF73	MITOCHONDRIAL RHO GTPASE	coord: 8..91
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 50..85 score: 10.692
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 40..82

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-ischiensis_contig74	contig	S-ischiensis_contig74:563055..564582 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Schizocladia ischiensis KU_0333	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-ischiensis_contig74.18795.1	mRNA_S-ischiensis_contig74.18795.1	Schizocladia ischiensis KU_0333	mRNA	S-ischiensis_contig74 563055..564582 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-ischiensis_contig74.18795.1 ID=prot_S-ischiensis_contig74.18795.1|Name=mRNA_S-ischiensis_contig74.18795.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=115bp
HACVSLQVETPWKVLRKHCYDDNLDLQLPPEVLQPPQGLGADQACELSPE
ALSFLRATFRQFDRDRDGLLLLDEARQAFAANPDPACAPWELPRATSDFR
GLFSAPFPFTIGDIA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013567	EF_hand_assoc_2
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair