mRNA_S-ischiensis_contig105.1842.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig105.1842.1
Unique NamemRNA_S-ischiensis_contig105.1842.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig105.1842.1 vs. uniprot
Match: A0A835Z7S8_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7S8_9STRA)

HSP 1 Score: 221 bits (563), Expect = 3.210e-67
Identity = 119/204 (58.33%), Postives = 149/204 (73.04%), Query Frame = 2
Query:   20 AMPAP-LPRSHVGHKF-HGYAAPKVVIELFLDLACPFSEKMYNTALAQVAPERERANPGQVEWVVHQVVQPWHPSSALMHEAALAVKEVNPEAFWDFFKAAYDQREDKFIDDVTYDKSRADMYEILSDIAASVGVDRAAVRQKLDLKATGNMGTWMTQELKFTIKFHRKRGVHVTPTVFVNGMEAGQVSSGWTVQEWNEFLDAL 625
            +M AP LP + +G+   H  A+PKV ++ F DLACPF+ +MY T L +V P  E      V W ++ V QPWHP S LMHEAALAV  V PEAF+DF  A + QRE+KFIDDVT DK+R  +Y++L++IAA VGV++ AVRQKL+LKA GNMGT MTQ +KF  ++HRKRGVHVTPTVF+NG+E G +SS  TV EW E LDAL
Sbjct:   46 SMMAPNLPPAPLGYTMPHSSASPKVQVDFFFDLACPFAGRMYLT-LQKVLPLYEGKG---VLWKMYHVPQPWHPQSTLMHEAALAVNTVKPEAFFDFCHAVWTQREEKFIDDVTVDKTRNQIYDVLAEIAAEVGVEKEAVRQKLELKALGNMGTHMTQGIKFATQYHRKRGVHVTPTVFMNGIENGAISSSATVDEWKETLDAL 245          
BLAST of mRNA_S-ischiensis_contig105.1842.1 vs. uniprot
Match: A0A7S4VHI0_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4VHI0_9DINO)

HSP 1 Score: 190 bits (483), Expect = 8.900e-56
Identity = 103/203 (50.74%), Postives = 131/203 (64.53%), Query Frame = 2
Query:   23 MPAPLPRSHVGHKFHGYAAP-KVVIELFLDLACPFSEKMYNTALAQVAPERERANPGQVEWVVHQVVQPWHPSSALMHEAALAVKEVNPEAFWDFFKAAYDQREDKFIDDVTYDKSRADMYEILSDIAA-SVGVDRAAVRQKLDLKATGNMGTWMTQELKFTIKFHRKRGVHVTPTVFVNGMEAGQVSSGWTVQEWNEFLDAL 625
            M  PLP   +GH +     P ++V+ELFLDL CPF +KM  TAL  VAP  E ++PGQV+W+   V+QPWHP S +MHEA LAV    PEA W +  A  D++E  F DD   DKSR  +YE L+ +A  SVG+ +A V   L L+  GN G+  TQ +K+  K HR RGVHVTPTVFVNG EA QV SGW+ +EW  FL+ +
Sbjct:    1 MGPPLPPGPLGHPYKAAEKPPRIVVELFLDLCCPFCKKMM-TALKDVAPAVEASHPGQVQWLFCNVIQPWHPQSCMMHEAFLAVSTKKPEAAWPYAWAVLDKQE-SFFDDQVMDKSRKQLYEELASVAEESVGLPKAEVLDVLALQGAGNAGSQATQLVKWYTKMHRVRGVHVTPTVFVNGTEAPQVGSGWSAEEWKAFLEPM 201          
BLAST of mRNA_S-ischiensis_contig105.1842.1 vs. uniprot
Match: A0A7S1WTV5_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WTV5_ALECA)

HSP 1 Score: 185 bits (469), Expect = 1.110e-53
Identity = 102/203 (50.25%), Postives = 129/203 (63.55%), Query Frame = 2
Query:   23 MPAPLPRSHVGHKFHGYAAP-KVVIELFLDLACPFSEKMYNTALAQVAPERERANPGQVEWVVHQVVQPWHPSSALMHEAALAVKEVNPEAFWDFFKAAYDQREDKFIDDVTYDKSRADMYEILSDIAAS-VGVDRAAVRQKLDLKATGNMGTWMTQELKFTIKFHRKRGVHVTPTVFVNGMEAGQVSSGWTVQEWNEFLDAL 625
            M  PLP   +GH F     P K+V+ELFLDL CPFS+KM  T L +V    E + PGQV+W+   V+QPWHP S +MHE  LAV     EA W F  A +D++E  F DD   DKSR  +YE ++ IA S VGV +A V   L L+  GN G+ +TQ +K+  K HR RGVHVTPTVFVNG EA QV SGW+ +EW  F++ +
Sbjct:    1 MGPPLPPGPLGHPFKAAERPPKIVVELFLDLCCPFSKKMMMT-LKEVTAAVEASCPGQVQWLFCNVIQPWHPQSCMMHEVCLAVSAKKAEATWPFIWALFDKQE-SFFDDQVMDKSRKQLYEEMAAIAESAVGVPKADVLGALALQGAGNSGSQVTQLVKWYTKMHRVRGVHVTPTVFVNGTEAPQVGSGWSAEEWKAFVEPM 201          
BLAST of mRNA_S-ischiensis_contig105.1842.1 vs. uniprot
Match: A0A813KXB5_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KXB5_POLGL)

HSP 1 Score: 172 bits (436), Expect = 7.590e-49
Identity = 94/196 (47.96%), Postives = 123/196 (62.76%), Query Frame = 2
Query:   35 LPRSHVGHKFHGYAAPKVVIELFLDLACPFSEKMYNTALAQVAPERERANPGQVEWVVHQVVQPWHPSSALMHEAALAVKE-VNPEAFWDFFKAAYDQREDKFIDDVTYDKSRADMYEILSDIAASVGVDRAAVRQKLDLKATGNMGTWMTQELKFTIKFHRKRGVHVTPTVFVNGMEAGQVSSGWTVQEWNEFLD 619
            +P   VG    G     V +ELFLDL CP+S KM+ T    VAP+ E    G+V++V H V QPWH  S  MHEA+LAV +   P+ FWDF  A + ++E+ F DD+  DK+R ++Y  L+ +A  VGV  A V  +L LK  GN G+ +TQ  K+  K HR RGVHVTPTV +NG+EAG V SGW+ +EW  FLD
Sbjct:    1 MPSVPVGVARPGGQKASVTVELFLDLCCPYSNKMFKTISEHVAPKYE----GEVKFVFHSVAQPWHAQSCYMHEASLAVLDSAGPQKFWDFAGALFCKQEE-FFDDMVMDKTRNELYSELAKVAEEVGVAPAEVLNRLQLKP-GNAGSAVTQRFKWATKLHRSRGVHVTPTVHLNGLEAGVVGSGWSPEEWQSFLD 190          
BLAST of mRNA_S-ischiensis_contig105.1842.1 vs. uniprot
Match: A0A7S4FB01_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FB01_CHRCT)

HSP 1 Score: 173 bits (438), Expect = 1.130e-48
Identity = 99/217 (45.62%), Postives = 134/217 (61.75%), Query Frame = 2
Query:    2 LQLGTRAMPAPLPRSHVGHKFHGYAAPKVVIELFLDLACPFSEKMYNT------ALAQVAPERERANPGQVEWVVHQVVQPWHPSSALMHEAALAVKEVNPEAFWDFFKAAYDQREDKFIDDVTYDKSRADMYEILSDIAASVGVDRAAVRQKLD-LKATGNMGTWMTQELKFTIKFHRKRGVHVTPTVFVNGMEAGQVSSGWTVQEWNEFLDALPK 631
            L +   A P PLP++ VG +     AP + + L+ DL CPFS +M+        A+AQ+    E+ + G+V+W  H V QPWH  SA MHEA+LAV+   PE  W F  A   Q++D F D+   D SR D+Y+ L+ IA++VG +  A+ Q L  L+ TGN G  +TQ LK+ ++ HR  GVHVTPTVFVNG+EA QVSSGW+  EW +F D L K
Sbjct:   25 LAIAASAAP-PLPKAPVGFRLFPGRAPALDVHLYHDLCCPFSRQMFEALCGDSGAIAQL----EKQSEGRVQWTYHCVPQPWHAQSACMHEASLAVEAAAPEKTWSFLAALNAQQQD-FFDEHAMDYSRRDLYKRLASIASTVGCEEEAILQLLSPLEPTGNSGIGVTQALKWHVRHHRAAGVHVTPTVFVNGIEAPQVSSGWSSTEWVDFCDGLLK 235          
BLAST of mRNA_S-ischiensis_contig105.1842.1 vs. uniprot
Match: A0A813G1E7_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813G1E7_POLGL)

HSP 1 Score: 167 bits (422), Expect = 6.540e-46
Identity = 95/216 (43.98%), Postives = 125/216 (57.87%), Query Frame = 2
Query:   32 PLPRSHVGHKFHGYAAPKVVIELFLDLACPFSEKMYNTALAQVAPERE-------------------RANPGQVEWVVHQVVQPWHPSSALMHEAALAVKE-VNPEAFWDFFKAAYDQREDKFIDDVTYDKSRADMYEILSDIAASVGVDRAAVRQKLDLKATGNMGTWMTQELKFTIKFHRKRGVHVTPTVFVNGMEAGQVSSGWTVQEWNEFLD 619
            P+P   VG    G     V +ELFLDL CP+S KM+ T    VAP+ E                   + +  QV++V H V QPWH  S  MHEA+LAV +   P+ FWDF  A + ++E+ F DD+  DK+R ++Y  L+ +A  VGV  A V  +L LK  GN G+ +TQ  K+  K HR RGVHVTPTV +NG+EAG V SGW+ +EW  FLD
Sbjct:   44 PMPSVPVGVARPGGQKASVTVELFLDLCCPYSNKMFKTISEHVAPKYEGEAGLMNICSLTQATLDMNKESLSQVKFVFHSVAQPWHAQSCYMHEASLAVLDSAGPQKFWDFAGALFCKQEE-FFDDMVMDKTRNELYSELAKVAEEVGVAPAEVLNRLQLKP-GNAGSAVTQRFKWATKLHRSRGVHVTPTVHLNGLEAGVVGSGWSPEEWQSFLD 257          
BLAST of mRNA_S-ischiensis_contig105.1842.1 vs. uniprot
Match: R1CC22_EMIHU (Thioredoxin-like_fold domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CC22_EMIHU)

HSP 1 Score: 164 bits (414), Expect = 1.310e-44
Identity = 100/211 (47.39%), Postives = 133/211 (63.03%), Query Frame = 2
Query:    8 LGTRAMPAPLPRSHVGHKFHGYAAPKVV-IELFLDLACPFSEKMYNTALAQVAPER--ERANPGQVEWVVHQVVQPWHPSSALMHEAALAVKEVNPEAFWDFFKAAYDQRED-KFIDDVTYDKSRADMYEILSDIAASVGVDRAAVRQKLDLKATG---NMGTWMTQELKFTIKFHRKRGVHVTPTVFVNGMEAGQVSSGWTVQEWNEFLD 619
            L  R M  PL  + +G+  +  AA   V +E+FLDL CPFS KM+ T       ER  +RA      +V+HQV QPWH   + +HEAALAVKEV P+ + ++  A Y+  +  KF D  T++KSR  +   L D+AASVGVDRAA   KL ++A+    N+G  +TQ +K+  K HR RGVHVTPTV VNG+EAG VSSGWT ++W  FL+
Sbjct:   59 LALRLMGPPLSPTAIGYVLNSAAAASPVRVEMFLDLICPFSRKMFVTLTEGRVIERAGDRAC-----FVLHQVPQPWHAQGSYVHEAALAVKEVAPDLYPNYIGAIYECFDKGKFTDRDTWEKSRTQINAELCDLAASVGVDRAATAAKLAMRASADGNNVGNEVTQAVKWICKHHRTRGVHVTPTVHVNGLEAGIVSSGWTPEQWLAFLE 264          
BLAST of mRNA_S-ischiensis_contig105.1842.1 vs. uniprot
Match: R1FWQ6_EMIHU (SAP domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FWQ6_EMIHU)

HSP 1 Score: 164 bits (414), Expect = 2.070e-44
Identity = 100/211 (47.39%), Postives = 133/211 (63.03%), Query Frame = 2
Query:    8 LGTRAMPAPLPRSHVGHKFHGYAAPKVV-IELFLDLACPFSEKMYNTALAQVAPER--ERANPGQVEWVVHQVVQPWHPSSALMHEAALAVKEVNPEAFWDFFKAAYDQRED-KFIDDVTYDKSRADMYEILSDIAASVGVDRAAVRQKLDLKATG---NMGTWMTQELKFTIKFHRKRGVHVTPTVFVNGMEAGQVSSGWTVQEWNEFLD 619
            L  R M  PL  + +G+  +  AA   V +E+FLDL CPFS KM+ T       ER  +RA      +V+HQV QPWH   + +HEAALAVKEV P+ + ++  A Y+  +  KF D  T++KSR  +   L D+AASVGVDRAA   KL ++A+    N+G  +TQ +K+  K HR RGVHVTPTV VNG+EAG VSSGWT ++W  FL+
Sbjct:   76 LALRLMGPPLSPTAIGYVLNSAAAASPVRVEMFLDLICPFSRKMFVTLTEGRVIERAGDRAC-----FVLHQVPQPWHAQGSYVHEAALAVKEVAPDLYPNYIGAIYECFDKGKFTDRDTWEKSRTQINAELCDLAASVGVDRAATAAKLAMRASADGNNVGNEVTQAVKWICKHHRTRGVHVTPTVHVNGLEAGIVSSGWTPEQWLAFLE 281          
BLAST of mRNA_S-ischiensis_contig105.1842.1 vs. uniprot
Match: A0A7S1FB44_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FB44_NOCSC)

HSP 1 Score: 160 bits (404), Expect = 4.670e-44
Identity = 92/202 (45.54%), Postives = 125/202 (61.88%), Query Frame = 2
Query:   32 PLPRSHVGHKFHGYAAPKVVIELFLDLACPFSEKMYNTALAQVAP-ERERANPGQVEWVVHQVVQPWHPSSALMHEAALAVKEVNPEAFWDFFKAAYDQREDKFIDDVTYDKSRADMYEILSDIAASVGVDRAAVRQKLDLKA---TGNMGTWMTQELKFTIKFHRKRGVHVTPTVFVNGMEAGQVSSGWTVQEWNEFLDAL 625
            P+P   +GH+  G    ++ IE FLD  CPF  K +N  + +V P  ++R     + +  + V QPWH  S+ MHEAALAV+EV+ + +  F  A +  +E +F DD  +DKSRA +Y+ L  +AASVGVD  AV  KL  K    + N G  +TQ LKF  KFHR RG+HVTPTV VNG+    +SSGWTV++W  +LDAL
Sbjct:    2 PVPSRPLGHRL-GDVTAQIEIEAFLDFCCPFCRKHWNCFVLEVLPLYKDRG----LNYRHYNVAQPWHAQSSYMHEAALAVEEVDADKYTAFATALFAAQE-QFFDDAVWDKSRATIYQELCTLAASVGVDAEAVAAKLARKVVEGSHNTGNDVTQALKFYTKFHRTRGMHVTPTVMVNGVVEDSISSGWTVEQWTGYLDAL 197          
BLAST of mRNA_S-ischiensis_contig105.1842.1 vs. uniprot
Match: A0A7S2V1J5_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1J5_9STRA)

HSP 1 Score: 155 bits (392), Expect = 2.360e-42
Identity = 82/199 (41.21%), Postives = 117/199 (58.79%), Query Frame = 2
Query:   23 MPAPLPRSHVGHKFHGYAAPKVVIELFLDLACPFSEKMYNTALAQVAPERERANPGQVEWVVHQVVQPWHPSSALMHEAALAVKEVNPEAFWDFFKAAYDQREDKFIDDVTYDKSRADMYEILSDIAASVGVDRAAVRQKLDLKATGNMGTWMTQELKFTIKFHRKRGVHVTPTVFVNGMEAGQVSSGWTVQEWNEFLD 619
            MP P P++  G      A+PK VIE FLD  CPFS KMYN   A+V P  + A+PG++++V+HQV QPWHP S LMH A  AV+EV P         A  + +  F D+   DK+R ++++ L+ +A + G  +  V   L++   G       Q +KF  K+HR RGVHVTPTV +NG+ A  + S ++V +W E +D
Sbjct:    1 MPPPFPKTPTGISLSKCASPKTVIEAFLDFQCPFSVKMYNKLTAEVVPHYQSAHPGEIDFVIHQVPQPWHPQSCLMHMALWAVREVGPPEAVAPMMNALCELQPSFSDEYCMDKTRRELFQQLAGLAGAAGSSQEGV---LNMLLEGKSA----QGIKFLCKYHRTRGVHVTPTVMLNGLVANHIESSFSVDQWKEAVD 192          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig105.1842.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z7S8_9STRA3.210e-6758.33Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A7S4VHI0_9DINO8.900e-5650.74Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A7S1WTV5_ALECA1.110e-5350.25Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A813KXB5_POLGL7.590e-4947.96Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A7S4FB01_CHRCT1.130e-4845.62Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A813G1E7_POLGL6.540e-4643.98Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
R1CC22_EMIHU1.310e-4447.39Thioredoxin-like_fold domain-containing protein n=... [more]
R1FWQ6_EMIHU2.070e-4447.39SAP domain-containing protein n=1 Tax=Emiliania hu... [more]
A0A7S1FB44_NOCSC4.670e-4445.54Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A7S2V1J5_9STRA2.360e-4241.21Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig105contigS-ischiensis_contig105:170725..173621 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score165.2
Seed ortholog evalue3.1e-38
Seed eggNOG ortholog2903.EOD19907
EggNOG OGs2B2AB@1,2S0CB@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size1086
Cds size612
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig105.1842.1prot_S-ischiensis_contig105.1842.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig105 171177..173599 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815565.6506138-UTR-S-ischiensis_contig105:170724..1711761622815565.6506138-UTR-S-ischiensis_contig105:170724..171176Schizocladia ischiensis KU_0333UTRS-ischiensis_contig105 170725..171176 -
1695739773.7434716-UTR-S-ischiensis_contig105:170724..1711761695739773.7434716-UTR-S-ischiensis_contig105:170724..171176Schizocladia ischiensis KU_0333UTRS-ischiensis_contig105 170725..171176 -
1622815565.7135298-UTR-S-ischiensis_contig105:173599..1736211622815565.7135298-UTR-S-ischiensis_contig105:173599..173621Schizocladia ischiensis KU_0333UTRS-ischiensis_contig105 173600..173621 -
1695739773.7874217-UTR-S-ischiensis_contig105:173599..1736211695739773.7874217-UTR-S-ischiensis_contig105:173599..173621Schizocladia ischiensis KU_0333UTRS-ischiensis_contig105 173600..173621 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815565.6622124-CDS-S-ischiensis_contig105:171176..1712521622815565.6622124-CDS-S-ischiensis_contig105:171176..171252Schizocladia ischiensis KU_0333CDSS-ischiensis_contig105 171177..171252 -
1695739773.7531617-CDS-S-ischiensis_contig105:171176..1712521695739773.7531617-CDS-S-ischiensis_contig105:171176..171252Schizocladia ischiensis KU_0333CDSS-ischiensis_contig105 171177..171252 -
1622815565.6757927-CDS-S-ischiensis_contig105:171470..1716151622815565.6757927-CDS-S-ischiensis_contig105:171470..171615Schizocladia ischiensis KU_0333CDSS-ischiensis_contig105 171471..171615 -
1695739773.7633202-CDS-S-ischiensis_contig105:171470..1716151695739773.7633202-CDS-S-ischiensis_contig105:171470..171615Schizocladia ischiensis KU_0333CDSS-ischiensis_contig105 171471..171615 -
1622815565.6919193-CDS-S-ischiensis_contig105:172475..1726661622815565.6919193-CDS-S-ischiensis_contig105:172475..172666Schizocladia ischiensis KU_0333CDSS-ischiensis_contig105 172476..172666 -
1695739773.7716584-CDS-S-ischiensis_contig105:172475..1726661695739773.7716584-CDS-S-ischiensis_contig105:172475..172666Schizocladia ischiensis KU_0333CDSS-ischiensis_contig105 172476..172666 -
1622815565.702574-CDS-S-ischiensis_contig105:173399..1735991622815565.702574-CDS-S-ischiensis_contig105:173399..173599Schizocladia ischiensis KU_0333CDSS-ischiensis_contig105 173400..173599 -
1695739773.7795043-CDS-S-ischiensis_contig105:173399..1735991695739773.7795043-CDS-S-ischiensis_contig105:173399..173599Schizocladia ischiensis KU_0333CDSS-ischiensis_contig105 173400..173599 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig105.1842.1

>prot_S-ischiensis_contig105.1842.1 ID=prot_S-ischiensis_contig105.1842.1|Name=mRNA_S-ischiensis_contig105.1842.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=204bp
MPAPLPRSHVGHKFHGYAAPKVVIELFLDLACPFSEKMYNTALAQVAPER
ERANPGQVEWVVHQVVQPWHPSSALMHEAALAVKEVNPEAFWDFFKAAYD
QREDKFIDDVTYDKSRADMYEILSDIAASVGVDRAAVRQKLDLKATGNMG
TWMTQELKFTIKFHRKRGVHVTPTVFVNGMEAGQVSSGWTVQEWNEFLDA
LPK*
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mRNA from alignment at S-ischiensis_contig105:170725..173621-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig105.1842.1 ID=mRNA_S-ischiensis_contig105.1842.1|Name=mRNA_S-ischiensis_contig105.1842.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2897bp|location=Sequence derived from alignment at S-ischiensis_contig105:170725..173621- (Schizocladia ischiensis KU_0333)
CTTGCAGCTAGGCACACGAGCCATGCCTGCCCCGCTGCCCAGGAGCCATG TCGGTCACAAATTCCACGGATATGCCGCCCCGAAGGTGGTGATAGAGCTG TTCCTGGATCTGGCCTGCCCATTCAGCGAGAAAATGTACAACACAGCTTT AGCTCAGGTGGCACCTGAGCGGGAGCGTGCCAACCCAGGGCAGGTCGAAT GGGTTGTCCACCAGGTTGTCCAGTGAGTACATAGGCCGCAGCGCCATTTC CGTGTTGTTGTTTGGTTTGGCCAAGCCCCTTGACCGGGGCTATGTGATGT CTCCATGCCGATTGCACTGTACCCGCCAAGGATGGCGTGTCCCCCACACG ACAGAGTACTAGTAATAACAGGAACACAGGGCGAGGTGCAGGCCACGTCA CTAAAGGCCTCAGCAGTGGCCCTTCCTTATAGCTCGCCAGGGGAAATTTG TGTGGGGCAGGGGAGAAAAGGAGGAGGGGGAGGTGGACGGGGAGGAGGAG GAGGAGGAGGAGGAGTTGCAGAAGTAGGTCGAGTACAATTTGTGTGTGTG AGTACACAAATAACGGAGGGTTAGTTACTGCTTTGCCGGAGTGTGCCACG GTCGTTTCTCTATGAAGTATGCCAGTAAGACGAGGACTGGTCCTGCTTTG CTGGTGCCCCTCAGTTTGAAGGACCAATGACCACGCTCGTCCGAGGGGGG ACCCTTGGAAGCGATCGTGTGTTTGTGTTATTGTTTCCATCTCACGCCCG CTCTGTGCTGGACGTTACACTAGATATGTGCGTCTCCATCCATCCGCCCT CCCAACCCCACGTCAACGCATGCCGTGTGTTGCATGCACTAGCGACCCCG TCTTTCGTATCTGTCGACTTGCACGGGCTCGCATCGGGGCCCAAACCACA AGTGGAATACACATGCACGGGGCGGCTCAGTTGTGCTCATAACTCTTCTG CTCAGGCCGTGGCATCCATCTTCCGCTCTCATGCATGAGGCGGCGTTGGC CGTGAAGGAGGTCAACCCGGAGGCCTTTTGGGACTTCTTCAAGGCTGCCT ACGACCAGCGTGAGGATAAATTTATCGACGACGTCACCTACGACAAGAGC CGTGCCGACATGTACGAGATTCTCTCCGACATTGCTGCGTCGGTCGGTAA GTGCTACATTGCCGCCTCAGTCAGTTCAGTAATGCCCAGGCAACAGATGT CCCTTGCTTGGCCATCTGGGATCGCACCTGTTATAGCATACCGGTACGCT GTGCTGCTGTAGAACGCCAACTGGTACTGTGCTTCAGGCTTATACGAAGT AGTTCGAAGTAGTACTGTAGTTACTCCAGGGAGTATGACAGTGTGGACTC GCACTGTGCTTGCCGTAGTCCCGAGGCCATTGATGGAAGTATGTATACTT CGATGTATACTGAGTGTGTATGCACACGTCGGACAGGTTTGCCCCGTGTC CTGTGCATGCCACTGAAAGCCGGCCCAGTATACTCCGTACTGGACGGTCG GTGGCATGCACTGGACGGGGTGTCTCCCCTGTCCAACGTGAGTACTCATA CACATACACACACACTGGACCACCGATCAGCCCCCGCAGGGTGCAGTGTA GCCTTTCGGCCATTGGCCTCTCAGCCCTACCGTGCCGGACGGAGCATGCT GGGTTTTCACCGGCCAGGCATGGGTTGCACACCAATCCCGGCTTGCCATG GGGCACGAGGGCACCCTGCACGAGCCATTTGGCTGGTAGTGAGTCGGGAA GCGGTGCAACCCTTTCATTGATTCTTGTGCTGTGTTCGTGAGGGGCCCTC TATCAGCGGAAAATACAGCCCCCGATGGAAGTACTTCAAAGTATGTAGAC ATGTACTTTGAAAAACGTGAAGTGCTTGTTGGCTTGTCTTGACAGAACCT TGCGTGCTTTGCCGACAGCCCTAAGTAAAAAAACTTTTGATTTTGCCCTG GCAAGGAGTACCGTGGTAATTTTACCTACCAAGATATCATGCGTGCCGTA TTCCAGGTGTGGACAGAGCCGCTGTGCGCCAAAAGCTGGACCTGAAGGCC ACGGGGAACATGGGTACCTGGATGACGCAGGAGCTCAAGTTCACCATCAA GTTCCACAGGAAGCGAGGCGTGCATGTCACACCCACGGTTTTCGTCAACG GGTGAGGGAGGCCTGTCCTATGTACTCGATCTGCCTCTCATAGACAATTA CCGCTCACTCGCAGCACGAGACATGCCAAACAGTGAGGGAAGCCTTTGTC CTCACCCATGAGTCTGTTCTCTCGCTCTCTCTTGTACTACGAAGTACGAA GTATGCTGACAGCATACAGAACTTATCTTTTTGTGTGCATGCTCCGTTTT CCGTGCTTTTGTGCGGCAGGATGGAGGCTGGGCAGGTCTCCAGCGGATGG ACTGTGCAGGAGTGGAACGAATTCCTCGACGCCCTGCCTAAGTGAGCAAT GGCCACGGCACTGCAGCTTATTGTACAGCACTCAATGTTGTGCATGTACT TTAGTACAGTGTACAACCCACGCTTGACCGGTGAAAACCCGGCAAGCTGC GTCCCAGCACAGCAAGAATGCGAGGCCAATGACCGAAAGGCTGTCCTGCG GGGGCTGGCCGGCGGTCCCAGCAAGTACTGTACTTCGTACAAGCACTACT TGTAGTAGGGTCCATGTTGAACAATTTTGCAATGGGGTGTACCCGCATTT TCTCTGGAACCATGATGAATACAAAAAAAGCGATTGCACCATGCGAGTCG GCGCCCTTGAATTTAGTCGAAATTTGTCTTTTCCAGCAACATCGGTGCAA ACGCATCCCCGCCTGTACTAAATCGTAGTACTTTGGCATCAGGCCCTCTA GGTGCCCCCCATTACCGGCAATAACCGATTGCCACCTACAGCGCCAT
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Coding sequence (CDS) from alignment at S-ischiensis_contig105:170725..173621-

>mRNA_S-ischiensis_contig105.1842.1 ID=mRNA_S-ischiensis_contig105.1842.1|Name=mRNA_S-ischiensis_contig105.1842.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1224bp|location=Sequence derived from alignment at S-ischiensis_contig105:170725..173621- (Schizocladia ischiensis KU_0333)
ATGCCTGCCCCGCTGCCCAGGAGCCATGTCGGTCACAAATTCCACGGATA
TGCCGCCCCGAAGGTGGTGATAGAGCTGTTCCTGGATCTGGCCTGCCCAT
TCAGCGAGAAAATGTACAACACAGCTTTAGCTCAGGTGGCACCTGAGCGG
GAGCGTGCCAACCCAGGGCAGGTCGAATGGGTTGTCCACCAGGTTGTCCA
ATGCCTGCCCCGCTGCCCAGGAGCCATGTCGGTCACAAATTCCACGGATA
TGCCGCCCCGAAGGTGGTGATAGAGCTGTTCCTGGATCTGGCCTGCCCAT
TCAGCGAGAAAATGTACAACACAGCTTTAGCTCAGGTGGCACCTGAGCGG
GAGCGTGCCAACCCAGGGCAGGTCGAATGGGTTGTCCACCAGGTTGTCCA
GCCGTGGCATCCATCTTCCGCTCTCATGCATGAGGCGGCGTTGGCCGTGA
AGGAGGTCAACCCGGAGGCCTTTTGGGACTTCTTCAAGGCTGCCTACGAC
CAGCGTGAGGATAAATTTATCGACGACGTCACCTACGACAAGAGCCGTGC
CGACATGTACGAGATTCTCTCCGACATTGCTGCGTCGGTCGGCCGTGGCA
TCCATCTTCCGCTCTCATGCATGAGGCGGCGTTGGCCGTGAAGGAGGTCA
ACCCGGAGGCCTTTTGGGACTTCTTCAAGGCTGCCTACGACCAGCGTGAG
GATAAATTTATCGACGACGTCACCTACGACAAGAGCCGTGCCGACATGTA
CGAGATTCTCTCCGACATTGCTGCGTCGGTCGGTGTGGACAGAGCCGCTG
TGCGCCAAAAGCTGGACCTGAAGGCCACGGGGAACATGGGTACCTGGATG
ACGCAGGAGCTCAAGTTCACCATCAAGTTCCACAGGAAGCGAGGCGTGCA
TGTCACACCCACGGTTTTCGTCAACGGGTGTGGACAGAGCCGCTGTGCGC
CAAAAGCTGGACCTGAAGGCCACGGGGAACATGGGTACCTGGATGACGCA
GGAGCTCAAGTTCACCATCAAGTTCCACAGGAAGCGAGGCGTGCATGTCA
CACCCACGGTTTTCGTCAACGGGATGGAGGCTGGGCAGGTCTCCAGCGGA
TGGACTGTGCAGGAGTGGAACGAATTCCTCGACGCCCTGCCTAAGTGAGA
TGGAGGCTGGGCAGGTCTCCAGCGGATGGACTGTGCAGGAGTGGAACGAA
TTCCTCGACGCCCTGCCTAAGTGA
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