mRNA_S-ischiensis_contig103.1778.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig103.1778.1 vs. uniprot
Match: D8LSJ8_ECTSI (Myb-like DNA-binding protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSJ8_ECTSI) HSP 1 Score: 239 bits (610), Expect = 2.540e-68 Identity = 116/155 (74.84%), Postives = 129/155 (83.23%), Query Frame = 3
Query: 381 KRRKPMRWSKEEDERLRAAVAEYGEARWKEIARTVESRNHVQCLQRWKKVLKPGLVKGQWSHMEDSRLQELVGQGFRNWGQVAMRMEGRTSKQCRERWCHHLDPAIVKGEWAEEEDCLIVQLQGKLGNRWADITKQLPGRTENAVKIRWKALTRR 845
KR KP++WS EED RLR AV + EARWK+IA VE+RNHVQCLQRWKKVLKPGLVKGQWS ED RL LV +GFRNWGQVA M+GRTSKQCRERWCHHLDPA+ KG + EED LI+ LQG++GNRWADI K+L GRTENAVKIRWKAL RR
Sbjct: 96 KRNKPVKWSAEEDRRLRDAVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKPGLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRWKALNRR 250
BLAST of mRNA_S-ischiensis_contig103.1778.1 vs. uniprot
Match: A0A7S2UU49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU49_9STRA) HSP 1 Score: 226 bits (577), Expect = 1.680e-67 Identity = 104/150 (69.33%), Postives = 127/150 (84.67%), Query Frame = 3
Query: 393 PMRWSKEEDERLRAAVAEYGEARWKEIARTVESRNHVQCLQRWKKVLKPGLVKGQWSHMEDSRLQELVGQGFRNWGQVAMRMEGRTSKQCRERWCHHLDPAIVKGEWAEEEDCLIVQLQGKLGNRWADITKQLPGRTENAVKIRWKALTR 842
P +W+ EDE LR AV +YGE+ WK+IAR V +RNHVQCLQRWKKVLKPGLVKGQWS +ED++L +LVG+GF+NWGQ+A +M GRTSKQCRERW HHLDP++ KGE+ EED I++LQ +LGN+W++I K LPGRTENAVKIRWKAL R
Sbjct: 27 PRKWTLVEDEELRHAVRKYGESNWKDIAREVGTRNHVQCLQRWKKVLKPGLVKGQWSALEDAKLVDLVGKGFKNWGQLAAQMPGRTSKQCRERWSHHLDPSVKKGEYTTEEDNTILRLQSELGNKWSEIAKHLPGRTENAVKIRWKALDR 176
BLAST of mRNA_S-ischiensis_contig103.1778.1 vs. uniprot
Match: A0A6H5K458_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K458_9PHAE) HSP 1 Score: 214 bits (545), Expect = 3.290e-61 Identity = 101/150 (67.33%), Postives = 115/150 (76.67%), Query Frame = 3
Query: 393 PMRWSKEEDERLRAAVAEYGEARWKEIARTVESRNHVQCLQRWKKVLKPGLVKGQWSHMEDSRLQELVGQGFRNWGQVAMRMEGRTSKQCRERWCHHLDPAIVKGEWAEEEDCLIVQLQGKLGNRWADITKQLPGRTENAVKIRWKALTR 842
P RWS EEDERLRAAV Y WKEIA V++RNHVQCLQRWKKVL PGLVKGQW+ ED L +V +G +NWG ++ R+ GRTSKQCRERWCHHLDP IVKG W EEED +IV LQ ++GN+WA I + L GRTENA KIRWK L R
Sbjct: 68 PRRWSPEEDERLRAAVERYHGTSWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWTPEEDKLLVSIVNEGHKNWGSLSARVPGRTSKQCRERWCHHLDPRIVKGGWTEEEDQIIVSLQQQMGNKWAKIAQHLDGRTENATKIRWKILER 217
BLAST of mRNA_S-ischiensis_contig103.1778.1 vs. uniprot
Match: H3G911_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G911_PHYRM) HSP 1 Score: 202 bits (514), Expect = 1.400e-60 Identity = 96/150 (64.00%), Postives = 114/150 (76.00%), Query Frame = 3
Query: 393 PMRWSKEEDERLRAAVAEYGEARWKEIARTVESRNHVQCLQRWKKVLKPGLVKGQWSHMEDSRLQELVGQGFRNWGQVAMRMEGRTSKQCRERWCHHLDPAIVKGEWAEEEDCLIVQLQGKLGNRWADITKQLPGRTENAVKIRWKALTR 842
P RW+ EEDE+LR AV +GE WK IA V RNH QCLQRW KVL PGLVKG W ED L+ELV +G +NWGQVA R+ GRTSKQCRERW +HLDP+IV+GE++ EED +I+ Q +LGNRW+ I LPGRTE+AVKIRWK+L R
Sbjct: 9 PKRWTPEEDEKLREAVNRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYSAEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSLCR 158
BLAST of mRNA_S-ischiensis_contig103.1778.1 vs. uniprot
Match: D0NJN5_PHYIT (Myb-like DNA-binding protein, putative n=2 Tax=Phytophthora TaxID=4783 RepID=D0NJN5_PHYIT) HSP 1 Score: 202 bits (513), Expect = 2.080e-59 Identity = 94/150 (62.67%), Postives = 114/150 (76.00%), Query Frame = 3
Query: 393 PMRWSKEEDERLRAAVAEYGEARWKEIARTVESRNHVQCLQRWKKVLKPGLVKGQWSHMEDSRLQELVGQGFRNWGQVAMRMEGRTSKQCRERWCHHLDPAIVKGEWAEEEDCLIVQLQGKLGNRWADITKQLPGRTENAVKIRWKALTR 842
P RW+ EED++LR AV +GE WK IA V RNH QCLQRW KVL PGLVKG W ED L+ELV +G +NWGQVA R+ GRTSKQCRERW +HLDP+I++GE++ EED +I+ Q +LGNRW+ I LPGRTE+AVKIRWK+L R
Sbjct: 82 PKRWTPEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPEEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYSPEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSLCR 231
BLAST of mRNA_S-ischiensis_contig103.1778.1 vs. uniprot
Match: A0A2P4Y3D9_9STRA (Myb-like DNA-binding protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y3D9_9STRA) HSP 1 Score: 203 bits (517), Expect = 6.000e-59 Identity = 95/150 (63.33%), Postives = 115/150 (76.67%), Query Frame = 3
Query: 393 PMRWSKEEDERLRAAVAEYGEARWKEIARTVESRNHVQCLQRWKKVLKPGLVKGQWSHMEDSRLQELVGQGFRNWGQVAMRMEGRTSKQCRERWCHHLDPAIVKGEWAEEEDCLIVQLQGKLGNRWADITKQLPGRTENAVKIRWKALTR 842
P RW++EED++LR AV +GE WK IA V RNH QCLQRW KVL PGLVKG W ED L+ELV +G +NWGQVA R+ GRTSKQCRERW +HLDP+IV+GE+ +EED +I+ Q +LGNRW+ I LPGRTE+AVKIRWK+L R
Sbjct: 91 PKRWTQEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDELLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYTQEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSLCR 240
BLAST of mRNA_S-ischiensis_contig103.1778.1 vs. uniprot
Match: D8LM16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM16_ECTSI) HSP 1 Score: 201 bits (512), Expect = 1.820e-58 Identity = 95/153 (62.09%), Postives = 115/153 (75.16%), Query Frame = 3
Query: 390 KPMRWSKEEDERLRAAVAEYGEARWKEIARTVESRNHVQCLQRWKKVLKPGLVKGQWSHMEDSRLQELVGQGFRNWGQVAMRMEGRTSKQCRERWCHHLDPAIVKGEWAEEEDCLIVQLQGKLGNRWADITKQLPGRTENAVKIRWKALTRRG 848
+P RW ED++L AV E GE WK IA V SRNHVQCLQRWKKVL+PGLVKGQW ED+ L +L F+NWG ++ M GRTSKQCRERWCHHLDP+I KG + EEED +I++ Q +LGNRW+ I +LPGRTEN++KIR KAL R+G
Sbjct: 105 RPRRWQPAEDKKLTLAVKESGEKDWKSIALKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDNIIIETQAELGNRWSQIAARLPGRTENSIKIRCKALQRKG 257
BLAST of mRNA_S-ischiensis_contig103.1778.1 vs. uniprot
Match: A0A6H5KJU6_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJU6_9PHAE) HSP 1 Score: 210 bits (534), Expect = 3.110e-58 Identity = 107/194 (55.15%), Postives = 132/194 (68.04%), Query Frame = 3
Query: 390 KPMRWSKEEDERLRAAVAEYGEARWKEIARTVESRNHVQCLQRWKKVLKPGLVKGQWSHMEDSRLQELVGQGFRNWGQVAMRMEGRTSKQCRERWCHHLDPAIVKGEWAEEEDCLIVQLQGKLGNRWADITKQLPGRTENAVKIRWKALTRR---GSTSAGTTPASLNDPGNGLPSSSAGSKSGSYYAIEYLES 962
+P RW EED++L AV E GE WK IA V SRNHVQCLQRWKKVL+PGLVKGQW ED+ L +L F+NWG ++ M GRTSKQCRERWCHHLDP+I KG + EEED +I++ Q KLGNRW+ I +LPGRTEN++KIR KAL R+ GS S+G S + P P S G+ + + + E S
Sbjct: 112 RPRRWQPEEDKKLTLAVKESGEKDWKSIALKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDKIIIETQAKLGNRWSQIAARLPGRTENSIKIRCKALQRKVLSGSPSSGGRSGSTSSPAGRAPKKSTGTSTTARQSRELSSS 305
BLAST of mRNA_S-ischiensis_contig103.1778.1 vs. uniprot
Match: A0A3M6VKU0_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKU0_9STRA) HSP 1 Score: 199 bits (505), Expect = 4.430e-58 Identity = 93/150 (62.00%), Postives = 113/150 (75.33%), Query Frame = 3
Query: 393 PMRWSKEEDERLRAAVAEYGEARWKEIARTVESRNHVQCLQRWKKVLKPGLVKGQWSHMEDSRLQELVGQGFRNWGQVAMRMEGRTSKQCRERWCHHLDPAIVKGEWAEEEDCLIVQLQGKLGNRWADITKQLPGRTENAVKIRWKALTR 842
P RW+ EDE+LR AV +GE WK IA V RNH QCLQRW KVL PGLVKG W ED L+ELV +G +NWGQVA R+ GRTSKQCRERW +HLDP+I++GE+++ ED +I+ Q +LGNRW+ I LPGRTE+AVKIRWK+L R
Sbjct: 99 PKRWTPTEDEKLRDAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDELLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYSQAEDRMILDAQSRLGNRWSAIAAMLPGRTEDAVKIRWKSLCR 248
BLAST of mRNA_S-ischiensis_contig103.1778.1 vs. uniprot
Match: D7FQG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG8_ECTSI) HSP 1 Score: 211 bits (537), Expect = 1.100e-57 Identity = 99/150 (66.00%), Postives = 114/150 (76.00%), Query Frame = 3
Query: 393 PMRWSKEEDERLRAAVAEYGEARWKEIARTVESRNHVQCLQRWKKVLKPGLVKGQWSHMEDSRLQELVGQGFRNWGQVAMRMEGRTSKQCRERWCHHLDPAIVKGEWAEEEDCLIVQLQGKLGNRWADITKQLPGRTENAVKIRWKALTR 842
P RWS EEDERLRAAV Y WKEIA V++RNHVQCLQRWKKVL PGLVKGQW+ ED L +V +G +NWG ++ R+ GRTSKQCRERWCHHLDP IVKG W E ED +I+ LQ ++GN+WA I + L GRTENA KIRWK L R
Sbjct: 17 PRRWSLEEDERLRAAVERYHGTNWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWTPEEDQLLVSIVNEGHKNWGSLSARIPGRTSKQCRERWCHHLDPRIVKGGWTEAEDQMIILLQQQMGNKWAQIAQHLDGRTENATKIRWKILER 166 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig103.1778.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig103.1778.1 >prot_S-ischiensis_contig103.1778.1 ID=prot_S-ischiensis_contig103.1778.1|Name=mRNA_S-ischiensis_contig103.1778.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=282bp MSGTVKPSGDVAEKVGVAAAGPSVGNGEPPTVDGQQTSADRGEDDDEEDQback to top mRNA from alignment at S-ischiensis_contig103:100081..107584- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig103.1778.1 ID=mRNA_S-ischiensis_contig103.1778.1|Name=mRNA_S-ischiensis_contig103.1778.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7504bp|location=Sequence derived from alignment at S-ischiensis_contig103:100081..107584- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig103:100081..107584- >mRNA_S-ischiensis_contig103.1778.1 ID=mRNA_S-ischiensis_contig103.1778.1|Name=mRNA_S-ischiensis_contig103.1778.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1692bp|location=Sequence derived from alignment at S-ischiensis_contig103:100081..107584- (Schizocladia ischiensis KU_0333)back to top |