mRNA_S-ischiensis_contig100.1668.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig100.1668.1
Unique NamemRNA_S-ischiensis_contig100.1668.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig100.1668.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig100contigS-ischiensis_contig100:52450..57235 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score64.7
Seed ortholog evalue7e-08
Seed eggNOG ortholog2880.D7FKP5
GOsGO:0001101,GO:0002831,GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005783,GO:0005789,GO:0005886,GO:0008150,GO:0008289,GO:0009719,GO:0009723,GO:0009725,GO:0009751,GO:0010008,GO:0010033,GO:0012505,GO:0014070,GO:0016020,GO:0031090,GO:0031347,GO:0031410,GO:0031982,GO:0031984,GO:0032101,GO:0035091,GO:0042175,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043900,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0046677,GO:0048519,GO:0048583,GO:0048831,GO:0050789,GO:0050793,GO:0050896,GO:0051093,GO:0051239,GO:0051241,GO:0065007,GO:0070273,GO:0071944,GO:0080134,GO:0097708,GO:0098588,GO:0098805,GO:0098827,GO:1900055,GO:1900056,GO:1900150,GO:1901700,GO:1901981,GO:1905622,GO:2000024,GO:2000026
EggNOG free text desc.Protein ENHANCED DISEASE RESISTANCE
EggNOG OGs2CMUG@1,2QS0N@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons5
Model size745
Cds size744
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig100.1668.1prot_S-ischiensis_contig100.1668.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig100 52451..57235 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815546.071612-CDS-S-ischiensis_contig100:52450..525761622815546.071612-CDS-S-ischiensis_contig100:52450..52576Schizocladia ischiensis KU_0333CDSS-ischiensis_contig100 52451..52576 -
1695739761.1374009-CDS-S-ischiensis_contig100:52450..525761695739761.1374009-CDS-S-ischiensis_contig100:52450..52576Schizocladia ischiensis KU_0333CDSS-ischiensis_contig100 52451..52576 -
1622815546.0827787-CDS-S-ischiensis_contig100:53679..537721622815546.0827787-CDS-S-ischiensis_contig100:53679..53772Schizocladia ischiensis KU_0333CDSS-ischiensis_contig100 53680..53772 -
1695739761.1471126-CDS-S-ischiensis_contig100:53679..537721695739761.1471126-CDS-S-ischiensis_contig100:53679..53772Schizocladia ischiensis KU_0333CDSS-ischiensis_contig100 53680..53772 -
1622815546.0928335-CDS-S-ischiensis_contig100:55544..556951622815546.0928335-CDS-S-ischiensis_contig100:55544..55695Schizocladia ischiensis KU_0333CDSS-ischiensis_contig100 55545..55695 -
1695739761.1555128-CDS-S-ischiensis_contig100:55544..556951695739761.1555128-CDS-S-ischiensis_contig100:55544..55695Schizocladia ischiensis KU_0333CDSS-ischiensis_contig100 55545..55695 -
1622815546.1049485-CDS-S-ischiensis_contig100:56668..569821622815546.1049485-CDS-S-ischiensis_contig100:56668..56982Schizocladia ischiensis KU_0333CDSS-ischiensis_contig100 56669..56982 -
1695739761.163813-CDS-S-ischiensis_contig100:56668..569821695739761.163813-CDS-S-ischiensis_contig100:56668..56982Schizocladia ischiensis KU_0333CDSS-ischiensis_contig100 56669..56982 -
1622815546.117211-CDS-S-ischiensis_contig100:57175..572351622815546.117211-CDS-S-ischiensis_contig100:57175..57235Schizocladia ischiensis KU_0333CDSS-ischiensis_contig100 57176..57235 -
1695739761.1737373-CDS-S-ischiensis_contig100:57175..572351695739761.1737373-CDS-S-ischiensis_contig100:57175..57235Schizocladia ischiensis KU_0333CDSS-ischiensis_contig100 57176..57235 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig100.1668.1

>prot_S-ischiensis_contig100.1668.1 ID=prot_S-ischiensis_contig100.1668.1|Name=mRNA_S-ischiensis_contig100.1668.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=248bp
DRHFVLRTNTLEYFSKPSDAAPKGSFELHPACTVSAVKEMKTTSGKVLFT
IRLAWPLPNHPEDGDIKEEDKKNSSGGADPDIYVPPPTSPAVAAYSHHNA
NAGPASIDRSWSNASAMSTASAPPRLGPHDAEGLHKRGSGGARHGRSMLR
RQSAANEAGGTCVMLQKRPDNPTAKEETHNETIQGLVNAQNESRTRFVTI
KEQMEQLKERELSEKKKEEEKEKKKYHKQAATAAVAGSALLTLGVVTG
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mRNA from alignment at S-ischiensis_contig100:52450..57235-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig100.1668.1 ID=mRNA_S-ischiensis_contig100.1668.1|Name=mRNA_S-ischiensis_contig100.1668.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4786bp|location=Sequence derived from alignment at S-ischiensis_contig100:52450..57235- (Schizocladia ischiensis KU_0333)
GATAGGCACTTCGTACTGAGGACCAACACGCTGGAGTACTTCTCAAAGCC
AAGCGACGCCGTGAGTCACACTCCTGCTTTTGGACTGGAGACCCGCTTGG
TATCCTGCATATGGGCCCGGAGCACAATTTTCCGCAGTGCCACGTGGGCC
GCTGTGCTTGTAGTGCTTGGGGAAGGAGAGGCGTAACTTATGGTTTCGTG
GACAACGGCGTCCCCGACTAACACACGTCTCCCCTCTCTCCCTCCCTGTC
CAGGCCCCCAAGGGCTCCTTCGAGTTGCACCCCGCGTGCACGGTGTCGGC
GGTGAAGGAGATGAAGACCACGAGCGGCAAAGTCCTCTTCACAATACGCC
TCGCCTGGCCGCTCCCCAATCACCCGGAAGATGGAGACATCAAGGAGGAG
GACAAGAAAAACTCTTCAGGGGGGGCTGACCCGGATATATACGTGCCCCC
TCCCACCTCACCCGCAGTAGCTGCGTACAGTCACCACAACGCCAATGCTG
GACCGGCCTCCATTGACCGCTCGTGGAGCAACGCGTCAGCCATGAGCACC
GCCAGCGCTCCTCCCAGGTGAGGCACACTATGTACGAGTACCTAACTTAT
TCACAAGTCCTTCCAAGCAATGAGGTACTTGGGTCATAGAGAAGTACGGA
TGGGCATGCCAGCCAACGCAACAGTCGCAGTACTGACATTGGAATCACTT
GGACGTCGGTTTTGCGGTTTTGGAGTCAATCCCGGAGTAGTACAGTAGCG
CAAGCACAAGATAGTGCAGGGAGCGTATGGTGTTGCTTCGTTGGTAGTGG
TTGACAGTCCGCCAAAGCCATTGGCCCATTGGCCAGGGCTTGAAAGCCAG
CAGACCAAAACTTGCGTTTTAAATAAGTATGCACTTGAGTACTACGGGTT
CAAGTTCTGTTAAGTATCGGCGACCTAGTGGTCTGGATCAATCATCGCTG
TTGTTCCTCCCATGACCGTTAGAGTGCTGATGCGCCCACGAGCAAACTCT
GCGAAGAGACTCACAAGTATGCGCTGACGGCTAAGTATGCTTGGCCGTAA
TCCAGCGAGCAACCCCTCATCCGGTTTGCCGACGCCAAGGCAGAATGACC
TTCCGGGCTTGGCCAGCGCGCGGCATGGCCGGTGCAAACCCGGCATGCTC
CGTCCTGGCGTAGTTGGGATGCGAGCGTCAATGGCGAAATAGCCACAGTA
CTCTGTCAGAGCGCAAACCCGAAGTTCAAGTTTGGGTTGTTGCACGCAAG
GGTGCATATGTCGCAAGACAAGCGAATGAGTACATGTACTTATATGTTGA
CCAAGTTGGCCAGAACGCTGCCAAGTTTCTACAGAGAGAGACTGAAGGGA
GAGAGGTGGGGAGAGACAGAGGGGGACGGGGAGGGGGAGGCGAGTGGGGG
AAGAGAGGTAGAGGAGACGAGAGGCAGAACTCTATTGTGTCACACTCGTT
TTTGAGCCACAAACCAGCTACCGCTGCCATTCGAGAGAGAGGAGAGAGAG
AGCCCTTGTCTCCGCCTGGCCGCGTGTGCTGCGTGTACAGGCTGGGCCCT
CATGATGCAGAGGGTTTGCACAAGCGCGGCAGCGGCGGAGCTCGGCATGG
GCGATCCATGCTCCGGAGGCAAAGTGCGGCCAACGAGGCCGGCGGCACTT
GCGTAATGCTGCAGAAGAGGCCCGACAACCCAACTGCCAAGGTATGCGCA
TTTGTGTATGTGACTCGTAGCTGCTTCGCCTAGGTCGGGGTGCGTGGTCA
ATGGTCTCGGGACTACGGCAAGCACCACGTGAGTACATATATATACTCGT
TCAATTATTCTCGTTGCGCTTGCCATAGCCCAGCGAATGTTTTACCGAAC
AACCTCCGCTGACAGCAGAGCAGTCCCGCTCCCGCAATGCCCGCACGGGG
AGGGTCCCCTCCCCTGCCTCTTCCTCCGTTTCCAGTTTGTGTGATACCAG
CATTGAAGTACTCTACTTCGAAGGAGCCCCCGAGTACTACAGGTTGCACT
CTGTGCACCTTACTGTACAGTGATGGAATATCGATCAGTGGATAGCTATC
GGGTTCAAGGTATTTTGTGGGTGGCGTTACCAGCTACTTGGACTTAGTGT
GGGTCAAAACTATCGAATATCGACTATCGATAGATATATAGATCAGTAGT
GTCGATAAATAGGTTGATTTTCTTACAGTAGATATATTCCATAACGGCCT
CGGCATGGCGGAGGTTTGGACCATCCAATGCAGACGCCGAGGTCATTCGC
CTCTGGGCTGGAGCGGTTGTACAGCGCACTGTTGGATGTGACAATTTACT
AGTATGTGGGCACGGCTTCTTCCACTCATTGGTGCACCGTTATATATGTG
CTCACGTGGTGCTTGCCGTAGTCCTGAGACCATTGACCACGCGCCTCTGT
CGAGACGCAGCAGGACCCCTCCGTCCCCTGGCACAGCTGCATTTTGTATT
GCCCAAGTGGGGTTTGCGCTGTTCGGTAGACATAGTCAGTGCGTAGAGCA
CAGCAGTATCTCGAGTACTCTACCCAGACGCACGTGCACTTCTCTGTACT
CTACTGCCAGTATTATTGCAGTAGAGAGCTTTTTGAAAGGTGTACTCGTA
CAGATGGATTACTGGACATGCGTGTACTGGGAAAGGCAAGTAGATGATAC
TCGACAGGCCGCGTTTGTATTGAGAGAACGAGTCCCCTACTTGTACAGGG
CTGGCAACCAGTGGGGCCGCCTTAGAACCACGCCGGTCCCGTGGGCTGGC
CACAGTGAGTGCTCACATCTCTTTGCCCCTGTGCAAGTACCGTACTCGGT
ATATACACAACGAAGTACTACGAATATATATATATGTACTCACGTGGTGC
TTGCCGTAGTCCCGAGACCATTGACCACGCTTACCGGTCAAGACGGAGCA
GGACCCCACCGTATGACGGAAAATAGCGACCCGGCTTTAGATAGCAACCC
CCCCTTAGAAAACAACCCCGGGCGGTCGCTCCAATTTCCAGCTGGAAAAG
ATATCCCCCGGGCTTATGTAGAAGACAAACAACCCCCCCTGCGTCGCCCG
GCCGGGGCCATGAAACTTGCTCGGGAAGCCTGAGATGAGGAGGGCCCAGC
ATGAGTCGCCAGGCGACTTTGAACACGCCAGCACTGTGGGGGCACGCAAA
TTATGATGGCAGCAAGACTAAAAGCAACCTAGCGGGTTTTGCCCTTTTTT
GTGGGCGTCGCAGCCCCGTCCACTGTGTCGCCACTCGCGTCCACCCAAGC
CTCGGAGCGTGCGGCACGGGCATCCGTGAAGCCCTCGCCGCCGCTGCAGC
CCTCCATCCCGTGCCCTCGTCGCCAGCCGCTGCAACCCTCCATCGCTCCA
TAGGTAGGCTTTAATGGCTCATGTGCTCTGCTCGGTGCTGTAAGAGTGCC
GTAACACATGCAAGGACAACAAGCCATGACAACACCAAACCACCACAATA
ACGATACATGCAGGAGGAGACACACAACGAGACCATCCAGGGGCTGGTCA
ATGCCCAGAACGAGAGCCGCACCCGCTTCGTCACGATCAAGGAGCAAATG
GAGCAGGTGCGCAGCTACAGGGGTTGAGGGTTTGTGGTGGTGGTGGTGGT
GGTGGTGGTGATGGTACTTGTACAGGGGCATCACTTGACATCCACTTGTC
CTAGTACGGGTGATCAACGCCTGTAGCAAGATGACCACGAGGATTTCCTC
GGGGCATGTACTCGCACGATGTACAGTATACTTCGAAGTATATACTGTAC
AGTAGTACACTCTGTGAGCCTGCGACAGTCTACTGTACTGTTCTGTAGTA
CCCGAGAAATTTTATTCCTCCATCGGTACACTGAGGCCTGGCGTGATGAG
TACACGCACGCGCACGATGCATGCATCCATGCACGCACAGAAACTACCTC
AAGGTACTCTTACTGTTTGACAACTTTTCCCATCTTTCTCTGGGAGCGGG
GGGGTGGCGTAGAAGCGCTTGTATCTCAAGGGCAACATGCAAAGAGGCAG
GAGAGGGGGCGCAAGGAGCACTATGTAGAAAACGGCCTCCTTACTGCTGT
GAATAGCCTTGCCTTTTGGGTTGATGATATGCCGAGCACTTCAATCTCAC
CCCCCAGACTGCGTACCTGGGCTTCGCTGTGCGCGTGCTTGTCATCAGTG
ATGGAATATTCATCAGTAGACAGCTATCGGGCTCGACTGATTTTGTGGGT
GGCGTTGCTAACTACTTCTACTTGGATTTAGTGCGGGTCAAACTATCGAA
TATCGACTATCGATAGATACATATATCAACGTGTGTAGTCACGTCTCTGT
GCATGCCCTGGACCCGAACAATCCTCGTCTTTGCTCCTTCTCGTGGATCG
CAGGCCGGCTGTAGCCAAAGCCATTGGCCACGCGTCCTATTGGACGGAGC
ACGCCGGGATATATAGATCCCGCAACGCAGCACGAGAGAGACCCCTTGTA
TTGCCCTTGCCTTCCCCTCTTTGTAGTTTGTTTTCTTGATTTTTGTGCCC
TGCGGGTGAAAAGAAGGGCTTCTGGTGAGGTCCCCACCTTAGGTTGTTGG
GACGGGCCCCGGAACTCGCATTCATCAAACTAGTTCAAAATCAGTGCTGT
CGATAAATAGGTTGACTTGCTTAGATATTCCATCACTGCTTGTCGCCGTA
CTTATTCAGCTGAAGGAGCGGGAGCTCAGCGAGAAGAAGAAGGAGGAGGA
GAAGGAGAAAAAAAAGTACCACAAGCAGGCGGCCACGGCGGCTGTCGCAG
GCTCCGCGCTACTGACCCTGGGCGTGGTGACCGGGG
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Coding sequence (CDS) from alignment at S-ischiensis_contig100:52450..57235-

>mRNA_S-ischiensis_contig100.1668.1 ID=mRNA_S-ischiensis_contig100.1668.1|Name=mRNA_S-ischiensis_contig100.1668.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1488bp|location=Sequence derived from alignment at S-ischiensis_contig100:52450..57235- (Schizocladia ischiensis KU_0333)
GATAGGCACTTCGTACTGAGGACCAACACGCTGGAGTACTTCTCAAAGCC
AAGCGACGCCGATAGGCACTTCGTACTGAGGACCAACACGCTGGAGTACT
TCTCAAAGCCAAGCGACGCCGCCCCCAAGGGCTCCTTCGAGTTGCACCCC
GCGTGCACGGTGTCGGCGGTGAAGGAGATGAAGACCACGAGCGGCAAAGT
CCTCTTCACAATACGCCTCGCCTGGCCGCTCCCCAATCACCCGGAAGATG
GAGACATCAAGGAGGAGGACAAGAAAAACTCTTCAGGGGGGGCTGACCCG
GATATATACGTGCCCCCTCCCACCTCACCCGCAGTAGCTGCGTACAGTCA
CCACAACGCCAATGCTGGACCGGCCTCCATTGACCGCTCGTGGAGCAACG
CGTCAGCCATGAGCACCGCCAGCGCTCCTCCCAGGCCCCCAAGGGCTCCT
TCGAGTTGCACCCCGCGTGCACGGTGTCGGCGGTGAAGGAGATGAAGACC
ACGAGCGGCAAAGTCCTCTTCACAATACGCCTCGCCTGGCCGCTCCCCAA
TCACCCGGAAGATGGAGACATCAAGGAGGAGGACAAGAAAAACTCTTCAG
GGGGGGCTGACCCGGATATATACGTGCCCCCTCCCACCTCACCCGCAGTA
GCTGCGTACAGTCACCACAACGCCAATGCTGGACCGGCCTCCATTGACCG
CTCGTGGAGCAACGCGTCAGCCATGAGCACCGCCAGCGCTCCTCCCAGGC
TGGGCCCTCATGATGCAGAGGGTTTGCACAAGCGCGGCAGCGGCGGAGCT
CGGCATGGGCGATCCATGCTCCGGAGGCAAAGTGCGGCCAACGAGGCCGG
CGGCACTTGCGTAATGCTGCAGAAGAGGCCCGACAACCCAACTGCCAAGG
CTGGGCCCTCATGATGCAGAGGGTTTGCACAAGCGCGGCAGCGGCGGAGC
TCGGCATGGGCGATCCATGCTCCGGAGGCAAAGTGCGGCCAACGAGGCCG
GCGGCACTTGCGTAATGCTGCAGAAGAGGCCCGACAACCCAACTGCCAAG
GAGGAGACACACAACGAGACCATCCAGGGGCTGGTCAATGCCCAGAACGA
GAGCCGCACCCGCTTCGTCACGATCAAGGAGCAAATGGAGCAGGAGGAGA
CACACAACGAGACCATCCAGGGGCTGGTCAATGCCCAGAACGAGAGCCGC
ACCCGCTTCGTCACGATCAAGGAGCAAATGGAGCAGCTGAAGGAGCGGGA
GCTCAGCGAGAAGAAGAAGGAGGAGGAGAAGGAGAAAAAAAAGTACCACA
AGCAGGCGGCCACGGCGGCTGTCGCAGGCTCCGCGCTACTGACCCTGGGC
GTGGTGACCGGGCTGAAGGAGCGGGAGCTCAGCGAGAAGAAGAAGGAGGA
GGAGAAGGAGAAAAAAAAGTACCACAAGCAGGCGGCCACGGCGGCTGTCG
CAGGCTCCGCGCTACTGACCCTGGGCGTGGTGACCGGG
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