mRNA_S-ischiensis_contig10.1633.1 (mRNA) Schizocladia ischiensis KU_0333
|
Overview
Homology
BLAST of mRNA_S-ischiensis_contig10.1633.1 vs. uniprot
Match: D8LM18_ECTSI (Eukaryotic translation initiation factor 3 subunit C n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM18_ECTSI) HSP 1 Score: 1061 bits (2744), Expect = 0.000e+0 Identity = 679/1005 (67.56%), Postives = 773/1005 (76.92%), Query Frame = 1
Query: 241 EVRVVRSAKDRSFEAIRGAVHKVKNGMKINDWNGIQTDFDECTKHIEKSKVMIAKEGVPKFYVKLLTSLEDFLTNTLKDKAAVKKMSATNTRSLNRMKLHLRKHNKAYEKEIADCRAHPEAYGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKK---------PKKPQRNLEDMDSDEWPSXXXXXXXXXXXXXXXXEDMPKGRARWLKKTP-VDGKKKKKDEKKAAKVDKGKKEK---VIEVKGGKGALPKLDLNMAPEHLGRKLREVLASRGKKGSDPKARERGGGXXXXXXXXXXXXXXXGRETGRMGAIPILMYLVSAMFDTLRNIDDYMETAMWRSCQAHLSRVVILLEEQPELQLGQLGNEAQADLILRSSAAGADLDXXXXXXXXEEVKKTGILKVVGTLATYAQKLDEEYNKSLQKINPHTQEYIMRLKDEAVLFELAGRVQAYYERIGEPSTAADMALSQAEHMYYQHDSIANKVRKAQAFTNKWGKVEDLHPACAAGAAT----GVVDAALAHPAAALGVPTVEVPERDYSAVLRKLCVYVYRNGDDRTRTRAMLCHITHHALNDRFFEARDLLLMSHLQDNISQTDVATQILYNRMMATLGLCAFRQGLVQEAHDCLRDVCSSRVKELLAQGIQINRFQDKNPEQEKAERRRQMPYHTHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVISKHFRRHMDIYSRQVFTGPPENIRDHVIAASKRLIEGDWRKCADLVLGLDMWNLIPGEGVAERVKDMVRAKIQEEALRTYLFTYSPYYESLSLPTLCEMFALDKRRAHSIISKMMINQELYGSWDQPTETIVLRKDDPSPLQLLALKFADKAANLVESNERLIDARTGGYGYRDDKGWGG--------GGXXXXXXGG--DXXXXXXXXFNSDRYKNP----NARYQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNYIRERRDMGLG 3162
EVRVV+SAKDRSFEAIR +V K++ +KINDWNGIQT+FDEC KH++KSKVMIAKEGVP FY+KLL +LED L TLKDK A+KKMSATNTRSLNRMKL LRKHNK YEKEIAD RA+P+AY + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P K Q+NLED XXXXXXXXXXXXXXX DM KGRA+WLKKT KK+KDEK+AAKV+ GKK+K V+ KGA KLDL+++ E L +KLRE LASRG+K +DPK R R G + IPI+MYLVSAMFDTLRNID++MET+MW+SC+ ++SRV LLE +PEL LGQ+GNE ADLI + G D+D EV+KTG+LKVVG+L+ Y +L +EY KSLQ INPHTQEYI RLKDE+V+ +LA +VQAYYER GE S AD+AL QAEH+YYQH+SIA V KAQ+FTNK+GK EDLHPAC +A+ G +D AHP A LG P+V+ DY+ L+ LCV VY++GDDR RTRAMLCHITHHAL+DRF ARDLLLMSHLQDNISQ D++TQILYNRMM TLGLCAFR+GL+ +AHDCLRDVCSSRVKELLAQG+Q+NRFQDKNPEQEKAERRRQ PYH HINLDLLECCHLTSAMLLEVPNMAQESTELRRRV+SKHFRR++DI++RQVFTGPPENIRDHVIAA+KRL+EGDW++C+DL+LGLD+WNLIPGEG AE VK MV+ KIQ EALRTYLFTYSP+YESLSLPTLCEMF + K +AHSIISKMM++ ELYGSWDQPTET+VLRK+DP+ LQLLALKFADKAANLVESNERLIDARTG YGYRDD G G GG GG XXXXXXX Y P N RYQG XXXXXXXXX NYIRERRDMG+G
Sbjct: 51 EVRVVKSAKDRSFEAIRTSVGKIRTKIKINDWNGIQTNFDECNKHVDKSKVMIAKEGVPSFYIKLLANLEDLLAVTLKDKPAIKKMSATNTRSLNRMKLQLRKHNKGYEKEIADFRANPDAYAEESSSEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVKTQKNLEDXXX--XXXXXXXXXXXXXXXXXXDGDMLKGRAKWLKKTDDTSDIKKRKDEKRAAKVEDGKKKKDKAVVTAGKEKGAALKLDLDISSEELEKKLRECLASRGRKATDPKEVLR----------QLSVLAYIARRLGPVREIPIIMYLVSAMFDTLRNIDEFMETSMWKSCREYISRVADLLESRPELTLGQMGNEVVADLI--QAGTGVDVDESEVADVLAEVEKTGVLKVVGSLSQYMIRLGDEYTKSLQNINPHTQEYIRRLKDESVVVDLAAKVQAYYERQGEMSVVADLALLQAEHLYYQHESIARAVHKAQSFTNKFGKTEDLHPACTVASASAPSDGALDVTKAHPGAFLGQPSVDHEYADYTEQLKNLCVTVYQHGDDRCRTRAMLCHITHHALHDRFHPARDLLLMSHLQDNISQADISTQILYNRMMVTLGLCAFRKGLIHDAHDCLRDVCSSRVKELLAQGVQMNRFQDKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVMSKHFRRYIDIFNRQVFTGPPENIRDHVIAAAKRLMEGDWKRCSDLILGLDVWNLIPGEGCAELVKVMVKEKIQVEALRTYLFTYSPHYESLSLPTLCEMFDMQKSKAHSIISKMMLSHELYGSWDQPTETVVLRKEDPNTLQLLALKFADKAANLVESNERLIDARTGAYGYRDDGGRGXXXXXXXXXGGRGDSSRGGRXXXXXXXXXWXXXXGYNRPGQTANNRYQGGQGGRGRXXXXXXXXX---------------NYIRERRDMGVG 1026
BLAST of mRNA_S-ischiensis_contig10.1633.1 vs. uniprot
Match: A0A835YUE3_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUE3_9STRA) HSP 1 Score: 934 bits (2414), Expect = 0.000e+0 Identity = 584/923 (63.27%), Postives = 688/923 (74.54%), Query Frame = 1
Query: 238 DEVRVVRSAKDRSFEAIRGAVHKVKNGMKINDWNGIQTDFDECTKHIEKSKVMIAKEGVPKFYVKLLTSLEDFLTNTLKDKAAVKKMSATNTRSLNRMKLHLRKHNKAYEKEIADCRAHPEAY-GDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA---------KKPKKPQRNLEDMDSDEWPSXXXXXXXXXXXXXXXXEDMPKGRARWLKKTPVDGKKKKKDEKKAAKVDKGKKEKVIEVK-------GGKGALP------KLDLNMAPEHLGRKLREVLASRGKKGSDPKARERGGGXXXXXXXXXXXXXXXGRETGRMGAIPILMYLVSAMFDTLRNIDDYMETAMWRSCQAHLSRVVILLEEQPELQLGQLGNEAQADLILRSSAAGADLDXXXXXXXXEEVKKTGILKVVGTLATYAQKLDEEYNKSLQKINPHTQEYIMRLKDEAVLFELAGRVQAYYERIGEPSTAADMALSQAEHMYYQHDSIANKVRKAQAFTNKWGKVEDLHPAC-AAGAATGVVDAALAHPAAALGVPTVEVPERDYSAVLRKLCVYVYRNGDDRTRTRAMLCHITHHALNDRFFEARDLLLMSHLQDNISQTDVATQILYNRMMATLGLCAFRQGLVQEAHDCLRDVCSSRVKELLAQGIQINRFQDKNPEQEKAERRRQMPYHTHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVISKHFRRHMDIYSRQVFTGPPENIRDHVIAASKRLIEGDWRKCADLVLGLDMWNLIPGEGVAERVKDMVRAKIQEEALRTYLFTYSPYYESLSLPTLCEMFALDKRRAHSIISKMMINQELYGSWDQPTETIVLRKDDPSPLQLLALKFADKAANLVESNERLIDARTGGYGYRDDKGWGGG 2934
DEVRVV+SAKDRS+EAI+ + K++N +KINDWNG QT FDE + ++K+KV IAKEG PKF++KLL LED LT TLKDKA VKKMSATNTRSLNRMKL L+KHNKAYE EIADCRA P+ Y GD+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KK KKP + L++MDSDEW XXXXXXXXXXX + KGRA W+K D K K++++K AK ++ G+G L +LD M P + RK++EVL SRG+KG+DP+ R G +P+LM+ V+AMFDTLR+IDDYMETAMW++C A L+RVV L+E P+L+LG + + ADL + + TG +K VG LAT+ Q+L+EEY KSLQKINPHT EYI+RLKDE+ + +LAG +Q YY R G+ AA +AL Q EH+YY+HDSIA V ++QAFT +G LHPAC G A D A+ HPAAALG PTVEV DY+A++R LCV++Y++G DR +TRAMLCHITHHAL+ RF ARDLLLMSHLQDNIS DV TQILYNRMM TLGLCAFR GL+ +AHDCLRDVCSSRVKELLAQGIQ NRFQ+KNPEQEKAERRRQMPYH HINLDLLECCHLT+AML EVP MA+E E+RRR ISK FRRHMD + QVFTGPPENIRDHVIA +K L++GDWRKCAD++LGLD+WNLIPGEG E+VK M+R KIQ EALRTYLFTYSP YESLSLP LCEMF L+ R+AHSIISKM+INQEL G+WDQPT TIVL++ +PS LQLLAL+FA+KA++LVESNERL+DARTG YGYR+DK WGGG
Sbjct: 48 DEVRVVKSAKDRSWEAIKTSCSKIRNHLKINDWNGTQTVFDELCRQMDKAKVNIAKEGTPKFFIKLLVDLEDKLTETLKDKAGVKKMSATNTRSLNRMKLQLKKHNKAYEAEIADCRAKPDEYAGDAGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPKKVKKPTKPLDEMDSDEWXXXXXXXXXXXXXDEAPMAGL-KGRAFWVKTVATDDAKAKREQRKLAKQEESXXXXXXXXXXXXXXXXAGRGVLVSARLGFRLDEKMTPAAVDRKVKEVLQSRGRKGTDPR----------DVLRQLAALAYVSRRFGPARELPVLMHTVAAMFDTLRSIDDYMETAMWKNCHATLTRVVGCLDECPDLRLGSMTADDMADLQAALPPKDKATEEEDEASAAAPQQTTGTVKAVGNLATFVQRLEEEYTKSLQKINPHTAEYILRLKDESAIVQLAGAIQGYYVRAGDFDRAATVALLQVEHLYYKHDSIALAVHRSQAFTAVYGSPAMLHPACLGTGPAATSADYAVVHPAAALGAPTVEVVPMDYAALMRDLCVFLYKHGGDRAKTRAMLCHITHHALHGRFHAARDLLLMSHLQDNISMVDVDTQILYNRMMVTLGLCAFRLGLIADAHDCLRDVCSSRVKELLAQGIQQNRFQEKNPEQEKAERRRQMPYHMHINLDLLECCHLTAAMLREVPTMARERGEIRRRHISKLFRRHMDNFDHQVFTGPPENIRDHVIAGAKSLMQGDWRKCADMILGLDVWNLIPGEGQGEKVKVMLREKIQLEALRTYLFTYSPCYESLSLPQLCEMFDLEPRKAHSIISKMLINQELCGAWDQPTNTIVLQRVEPSRLQLLALQFAEKASSLVESNERLLDARTGNYGYREDK-WGGG 958
BLAST of mRNA_S-ischiensis_contig10.1633.1 vs. uniprot
Match: A0A7S4E4E4_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E4E4_9STRA) HSP 1 Score: 762 bits (1968), Expect = 3.800e-258 Identity = 502/959 (52.35%), Postives = 629/959 (65.59%), Query Frame = 1
Query: 106 SKFWAAGSDSGXXXXXXXXXXXSLGGNVGQQRRQWAVDSDSESEDE-VRVVRSAKDRSFEAIRGAVHKVKNGMKINDWNGIQTDFDECTKHIEKSKVMIAKEGVPKFYVKLLTSLEDFLTNTLKDKAAVKKMSATNTRSLNRMKLHLRKHNKAYEKEIADCRAHPEAYGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKPKKPQRNLEDMDSDEWPSXXXXXXXXXXXXXXXXEDMPKGRARWLKKTPVDGKKKKKDEKKAAKVDKGKKEKVIEVKGGKGALPKLDLNMAPEHLGRKLREVLASRGKKGSDPKARERGGGXXXXXXXXXXXXXXXGRETGRMGAIPILMYLVSAMFDTLRNIDDYMETAMWRSCQAHLSRVVILLEEQPELQLGQLGNEAQADLILRSSAA----GADLDXXXXXXXXEEVKKT-------GILKVVGTLATYAQKLDEEYNKSLQKINPHTQEYIMRLKDEAVLFELAGRVQAYYERIGEPSTAADMALSQAEHMYYQHDSIANKVRKAQAFTNKWGKVEDLHPACAAGAATGVVDAALAHPAAALGVPTVEVPER-DYSAVLRKLCVYVYRNGDDRTRTRAMLCHITHHALNDRFFEARDLLLMSHLQDNISQTDVATQILYNRMMATLGLCAFRQGLVQEAHDCLRDVCSSRVKELLAQGIQINRFQDKNPEQEKAERRRQMPYHTHINLDLLECCHLTSAMLLEVPNMAQESTEL--------RRRVISKHFRRHMDIYSRQVFTGPPENIRDHVIAASKRLIEGDWRKCADLVLGLDMWNLIPGEGVAERVKDMVRAKIQEEALRTYLFTYSPYYESLSLPTLCEMFALDKRRAHSIISKMMINQELYGSWDQPTETIVLRKDDPSPLQLLALKFADKAANLVESNERLIDARTGGYGYRDDK 2919
S+FWA G DSG XXXXXX Q R WA SDS+S DE RVVRSAKD++++ ++ V K+ N KINDW+ +QT FD K ++K+K I KEG+P+FY++ L LED L LKDK A KKMS N R+LNRMKL LR+HNK +E +I + RA+P+A +SXXXXXXXXXXXXXXXXXXXXXXXXX +KPKK Q+NLEDMDSD+W XXXXXXXXXXXXXX E KGRARWLK+T K+ KK+ E+V + K G + +LD +KL EV+A+RG+KG+DP+ ++ + G + M+L+++ FD+ R IDDYM+ WR+C L++ +LE P+ LG + ++ ADL L + A XXXXXXX +EV T G +KVVG L TY +L++EY KSLQ INPHTQEY+ RL+DE L ELAG +QAYY+R G TAA +AL + EHMYY+HDSIA VR AQAF WG +D+H A + A GV +HP + LG PT + D + L++LC YVY +GDDR RTRA+LCH+ HHAL+ RF ARDLLLMSHLQ+ D+ TQILYNR M LGLCAFR GLV +AH CL ++CSSRVKELLAQG+Q R+ DK+ EQEKAERRRQ PYH H+NLDLLECCHLTSAMLLEVP M E R RV S+HFR+HMDI+SRQVFTGPPEN RDH++ A+K L GDWR+CA LV+ LD+W+LIPG G AE+VK MVR KI+ EALRTYLF + Y++LSL LC F + +R AH ++SKMMI +EL G+WDQPT+TIVLR+ +PSP+Q LAL +AD+ A LV++NERL+DAR GG GY+DD+
Sbjct: 2 SRFWA-GDDSGSSSAEXXXXXXXXQEKKVQTNR-WAAVSDSDSSDEGERVVRSAKDKAWDGMKAVVSKISNARKINDWHEMQTQFDLLNKQVDKAKTHIQKEGLPRFYIRTLAELEDSLDVALKDKEAQKKMSKANGRALNRMKLQLRRHNKEFEAKITEYRANPDAEEESXXXXXXXXXXXXXXXXXXXXXXXXXSV-----------------------------EEKPKKVQKNLEDMDSDDWXXXXXXXXXXXXXXXXTGEL--KGRARWLKRTVTTTKRVKKERVIEKXXXXXXXEEVKKDKKGLVSSLRLDAIQTGADFDKKLTEVMAARGRKGTDPRDLKQA---------LEVLAKAAQEKFGFHRELQCCMHLIASHFDSNRTIDDYMDVPTWRACHGQLTKACSILEAHPQATLGTVDDDELADLALAAMLAKXXXXXXXXXXXXXXXPKEVIDTEAPPDEAGCVKVVGNLLTYVTRLEDEYVKSLQHINPHTQEYVARLRDERPLEELAGSIQAYYDRSGSTETAATVALLRIEHMYYKHDSIAEAVRDAQAFRAAWGSRDDVH-AASRKATAGVSTVEKSHPGSWLGAPTTPSTDSCDTAKSLKELCGYVYDHGDDRCRTRALLCHVAHHALHGRFHAARDLLLMSHLQEVAHDADIETQILYNRAMVLLGLCAFRSGLVHDAHSCLAEICSSRVKELLAQGVQSARWSDKSDEQEKAERRRQTPYHMHVNLDLLECCHLTSAMLLEVPAMVVEEARNKQLRGAPPRTRVTSRHFRKHMDIFSRQVFTGPPENTRDHILCAAKALALGDWRECARLVVELDVWDLIPGTGEAEKVKAMVREKIKAEALRTYLFARADAYDALSLERLCATFEMPERTAHGLVSKMMITKELRGAWDQPTKTIVLRRLEPSPVQALALAYADRCAALVDANERLLDARAGGKGYKDDR 917
BLAST of mRNA_S-ischiensis_contig10.1633.1 vs. uniprot
Match: A0A7S2HV13_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HV13_9STRA) HSP 1 Score: 748 bits (1932), Expect = 2.130e-252 Identity = 475/912 (52.08%), Postives = 602/912 (66.01%), Query Frame = 1
Query: 196 QRRQWAVDSDSESEDEVRVVRSAKDRSFEAIRGAVHKVKNGMKINDWNGIQTDFDECTKHIEKSKVMIAKEG-VPKFYVKLLTSLEDFLTNTLKDKAAVKKMSATNTRSLNRMKLHLRKHNKAYEKEIADCRAHPEAYGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKPKKPQRNLEDMDSDEWPSXXXXXXXXXXXXXXXXEDMPKGRARWLKKTPVDGKKKKKD-----EKKAAKVDKGKKEKVIEVKGGKGALPKLDLNMAPEHLGRKLREVLASRGKKGSDPKARERGGGXXXXXXXXXXXXXXXGRETGRMGAIPILMYLVSAMFDTLRNIDDYMETAMWRSCQAHLSRVVILLEEQPELQLGQLGNEAQADLILRSSAAGADLDXXXXXXXXEEVKKTGILKVVGTLATYAQKLDEEYNKSLQKINPHTQEYIMRLKDEAVLFELAGRVQAYYERIGEPSTAADMALSQAEHMYYQHDSIANKVRKAQAFTNKWGKVEDLHPACA---AGAATGVVDAALAHPAAALGVPTVEVPERDYSAVLRKLCVYV-YRNGDDRTRTRAMLCHITHHALNDRFFEARDLLLMSHLQDNISQTDVATQILYNRMMATLGLCAFRQGLVQEAHDCLRDVCSSRVKELLAQGIQINRFQDKNPEQEKAERRRQMPYHTHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVISKHFRRHMDIYSRQVFTGPPENIRDHVIAASKRLIEGDWRKCADLVLG-LDMWNLIPGEGVAERVKDMVRAKIQEEALRTYLFTYSPYYESLSLPTLCEMFALDKRRAHSIISKMMINQELYGSWDQPTETIVLRKDDPSPLQLLALKFADKAANLVESNERLIDARTGG 2898
+ +WAVD +E R V SAKD+++ A+ V +KN MK NDW IQ FD+ + +EK + +I KEG VP+FY++LL LED L TLKDK A KKM+ N R+LNRMKL+LRKHN +E EI R +PE + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX K K P+++L++MDSD+W SXXXXXXXXXX + GR +WLK V+ K+ +KD E+++ K DK K K A + +++ L K+ E+++ RG++ +DPK ++ G IP L +LVS+ FD RN+DD+M+ +W++C H+ R+ +L E PEL L +G + AD+IL A +L+ +E ++++G L + +LDEEY K+LQKINPHT EY++RL+ E+ L +L VQ YYERI + AA +AL EH+YY HDSIA V KAQ F KWG DLHPAC AG+ G DAA HPA+ G PT+ D A +++ C V Y++GDDRTRTRAMLCHI HHA +DRF+EARDLLLMSHLQ++I DV TQIL+NR M LGLCAFR GL+ +AH CL D+CSSRVKELLAQG+Q R+ +KNPEQE AERRRQ PYH HINLDLLE CHLT+AMLLEVPNMA E R RVIS+HFR+HMD Y RQVFTGPPEN+RDHV+AA+K L G+W+KC +L+L +D+WNLIPGE E VK M+ KI+ EALRTYLF YS +Y+SLSLP LC MFAL+KR AH IISKMMINQEL+ SWDQPT+T+VL K +P+ LQ LAL++ADKA+ LVESNER ++A GG
Sbjct: 34 KENRWAVDXXXXXXEENRKVVSAKDKAWIAMESDVKNIKNSMKNNDWAQIQETFDDLNRKVEKQQNLIKKEGGVPRFYIRLLAELEDLLLTTLKDKDAQKKMNKANGRALNRMKLNLRKHNLKFETEIKAYRENPEEEKEGGSGSSDNSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDG---------------KKKAPKKSLDEMDSDDWASXXXXXXXXXXEDVV--DKALTGRDKWLKTNTVETKRVRKDKTKKPEQESKKADKSK-------TSNKRAEFSVSSDISEADLKHKIIELVSMRGRRNTDPKE----------LIKNLNMLCQVTKKFGPRCEIPALCHLVSSFFDMQRNMDDFMDLPIWKTCHGHMMRISQILNENPELVLTSIGADDIADMIL---AQQGNLEEVKEEPKVDE--DANKIQIIGNLVNFVNRLDEEYTKALQKINPHTVEYVVRLRMESQLVKLCTTVQQYYERIEDMKNAASVALLCIEHVYYMHDSIAAAVFKAQKFAEKWGAYSDLHPACMSSDAGSEDGKFDAASVHPASIGGKPTITDKLEDVGAFIQEQCHRVIYKHGDDRTRTRAMLCHIAHHAAHDRFYEARDLLLMSHLQEHIGHADVHTQILFNRAMVMLGLCAFRAGLIWDAHQCLSDICSSRVKELLAQGLQSMRYSEKNPEQENAERRRQTPYHMHINLDLLEGCHLTAAMLLEVPNMATEDVSERPRVISRHFRKHMDFYERQVFTGPPENVRDHVLAAAKALTTGEWKKCTELILDDMDIWNLIPGEKSGEAVKKMLLEKIKAEALRTYLFAYSAHYDSLSLPQLCNMFALEKRTAHGIISKMMINQELHASWDQPTDTVVLHKVEPTHLQALALQYADKASMLVESNERFLEASLGG 906
BLAST of mRNA_S-ischiensis_contig10.1633.1 vs. uniprot
Match: A0A7S2UU87_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU87_9STRA) HSP 1 Score: 739 bits (1907), Expect = 2.540e-248 Identity = 508/937 (54.22%), Postives = 637/937 (67.98%), Query Frame = 1
Query: 190 GQQRRQWAVDSDSESEDEVRVVRSAKDRSFEAIRGAVHKVKNGMKINDWNGIQTDFDECTKHIEKSKVMIAKEGVPKFYVKLLTSLEDFLTNTLKDKAAVKKMSATNTRSLNRMKLHLRKHNKAYEKEIADCRAHP-EAYGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKPKKPQRNLEDMDSDEWPSXXXXXXXXXXXXXXXXEDMPKGRARWLKKTPVDGKKKKKDEKKAAKVDKGKKEKVI-------EVKGGKGA----LPKLDLNMAPEHLGRKLREVLASRGKKGSDPKARERGGGXXXXXXXXXXXXXXXGRETGRMGAIPILMYLVSAMFDTL-RNIDDYMETAMWRSCQAHLSRVVILLEEQPELQLGQLGNEAQADLILRSSAA----GADLDXXXXXXXXEEVKKTGI-----LKVVGTLATYAQKLDEEYNKSLQKINPHTQEYIMRLKDEAVLFELAGRVQAYYERIGEPSTAADMALSQAEHMYYQHDSIANKVRKAQAFTNKWGKVEDLHPACAAGAAT-GVVDAALAHPAAALGVPTVEVPER-DYSAVLRKLCVYVYRNGDDRTRTRAMLCHITHHALNDRFFEARDLLLMSHLQDNISQTDVATQILYNRMMATLGLCAFRQGLVQEAHDCLRDVCSSRVKELLAQGIQINRFQDKNPEQEKAERRRQMPYHTHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVISKHFRRHMDIYSRQVFTGPPENIRDHVIAASKRLIEGDWRKCADLVLGLDMWNLIPGEGVAERVKDMVRAKIQEEALRTYLFTYSPYYESLSLPTLCEMFALDKRRAHSIISKMMINQELYGSWDQPTETIVLRKDDPSPLQLLALKFADKAANLVESNERLIDARTGGYGYRDDKGWG 2928
G +WAVDS DE RVVRS KD++++AI+ + KVKN M+INDW GIQT F++ K +EKSK +I +EG+P+FY++LL LED L LKDK A+KKM+++N+RSLNRMKL L+KHNK +E +A R +P E+ G+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXX KGRARWLKKTP + KK K + G K A L ++D N+ E L K+ E +ASRG++G++ + R R+ G +P+L +LVSA FDT R IDDYM+T W+ A L RVV +LE +L+L + + ADL+L +D E + ++VVGTL+ Y ++++EEY KSLQ INPHTQEYI RLKDEA++ LA +VQAYY R+G P+ AA M L EH YY+HDSIA V++AQ+FT WG LHP C A G +DA HPA+ALG PT + D + + + +++YR+GDDR RTRAMLCHITHHA++DRF +ARDLL MSHLQD I TDV+TQIL+NR M LGLCAFR G++ E H C+ +VCS R KELLAQG+Q +R+ ++NPE+EKAE+RRQMPYH HINLDLLECCHLT+AMLLEVPN+A + R++VIS+HFR+ DIYSRQVFTGPPEN RDHV+A+++ L EG WR+ A L+LGLD+WNLIPGEG A +VK M+ K++ EALRTYLFTYS +Y SLSL LC MF + K + HS++SKMM+ +E+ SWDQPTET+VL K +PSPLQ LAL+FA+KA+ LVESNERL+DAR GG YR+D WG
Sbjct: 47 GPAASRWAVDSXXXXXDEGRVVRSQKDKAWDAIQNGIKKVKNSMRINDWGGIQTGFEDLNKLMEKSKTLIEREGMPQFYIRLLAQLEDLLAVALKDKEAIKKMNSSNSRSLNRMKLVLKKHNKNHEAALAKYRENPVESEGEESAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------XXXXXXXXXXXXXXXXXXXQLKGRARWLKKTPAETTKKAKXXXXXXXXXXXXXXXXXXXXXXXAQALGDKAAAQQGLVRVDENITAEELEVKVLEAVASRGRRGTNIRDLLR----------QLQALAYAARKFGPRVELPVLFHLVSAQFDTTSRQIDDYMQTTSWKHVYACLMRVVSVLEGHQDLKLAVVADTDLADLVLAGKGELKVQDKPIDEEGEGQEVEGDAEAATNDPNEIQVVGTLSAYMRRINEEYVKSLQHINPHTQEYIARLKDEALIVALAAKVQAYYVRVGMPTEAASMCLMGLEHTYYKHDSIALAVQRAQSFTALWGDRALLHPGCVACTKMEGKLDAETCHPASALGTPTCDFSSLPDMAQEVSDMALFIYRHGDDRLRTRAMLCHITHHAMHDRFHQARDLLFMSHLQDTIGHTDVSTQILFNRAMVLLGLCAFRAGMILEGHYCMTEVCSGRTKELLAQGVQQSRYHERNPEKEKAEKRRQMPYHMHINLDLLECCHLTAAMLLEVPNIALDPG--RKKVISRHFRKCRDIYSRQVFTGPPENTRDHVMASAQALEEGQWRQAAKLLLGLDVWNLIPGEGSAAKVKVMLEEKLKVEALRTYLFTYSSHYNSLSLNQLCSMFDMPKPKVHSLLSKMMMAEEIQASWDQPTETVVLHKVEPSPLQQLALQFAEKASFLVESNERLLDARCGGGAYRED--WG 952
BLAST of mRNA_S-ischiensis_contig10.1633.1 vs. uniprot
Match: F0Y6I4_AURAN (PCI domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6I4_AURAN) HSP 1 Score: 726 bits (1875), Expect = 1.820e-245 Identity = 484/940 (51.49%), Postives = 582/940 (61.91%), Query Frame = 1
Query: 103 SSKFWAAGSDSGXXXXXXXXXXXSLGGNVGQQRRQWAVDSDSESEDE-VRVVRSAKDRSFEAIRGAVHKVKNGMKINDWNGIQTDFDECTKHIEKSKVMIAKEGVPKFYVKLLTSLEDFLTNTLKDKAAVKKMSATNTRSLNRMKLHLRKHNKAYEKEIADCRAHPEAYGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKPKKPQRNLEDMDSDEWPSXXXXXXXXXXXXXXXXEDMPKGRARWLKKTPVDGKKKKKDEKKAAKVDKGKKEKVIEVKGGKGALPKLDLNMAPEHLGRKLREVLASRGKKGSDPKARERGGGXXXXXXXXXXXXXXXGRETGRMGAIPILMYLVSAMFDTLRNIDDYMETAMWRSCQAHLSRVVILLEEQPELQLGQLGNEAQADLILRSSAAGADLDXXXXXXXXEEVKKTGILKVVGTLATYAQKLDEEYNKSLQKINPHTQEYIMRLKDEAVLFELAGRVQAYYERIGEPSTAADMALSQAEHMYYQHDSIANKVRKAQAFTNKWGKVEDLHPACAAGAATGVVDAALAHPAAALGVPTVEVPERDYSAVLRKLCVYVYRNGDDRTRTRAMLCHITHHALNDRFFEARDLLLMSHLQDNISQTDVATQILYNRMMATLGLCAFRQGLVQEAHDCLRDVCSSRVKELLAQGIQINRFQDKNPEQEKAERRRQMPYHTHINLDLLECCHLTSAMLLEVPNMAQESTEL--RRRVISKHFRRHMDIYSRQVFTGPPENIRDHVIAASKRLIEGDWRKCADLVLGLDMWNLIPGEGVAERVKDMVRAKIQEEALRTYLFTYSPYYESLSLPTLCEMFALDKRRAHSIISKMMINQELYGSWDQPTETIVLRKDDPSPLQLLALKFADKAANLVESNERLIDARTGGYGYRD 2913
SS+FWA D S+ + +WA SDSES DE RVV+SAKDR+++ ++ + K+ N KI DWNGIQT+F+ K ++K+K+ I KEG+P+FYV+ L LEDFL LKDK A KKMSA+N RSLNRMKL LRKHNK YE +IA +A P+A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KGRA+WLK T V K+ M+ E +KL EV+ASRG+KG+D ARE R G + LM+L++A FD R IDDYM+ A WRSC L RVV +L P G+ A D D +KVVG L T+ +L++EY KSLQ+INPHT EY+ RL+DEA L +LA VQAYY R+G+ AA +AL + EHMYY+H+SIA+ VR AQA+ HP GAAT AA P EV D SA +RKLC YVY +GDDR RTRA+LCH+ HHAL+ RF+ ARDLLLMSHLQD +DV TQILYNR M LGLCAFR GL+ +AH CL ++CSSRVKELLAQG+Q RF DKNPEQEKAERRRQ PYH HINLDLLECCHLT+AMLLEVPNM+ E+ +R IS+HFR+H+DI++RQVFTGPPEN RDHV+ A+K L GDW+ CADLVL LD+W L+PG G +RVK M+ KI+ EALRTYLF YS Y++LSLP LC+MF L K AH ++SKMMIN+EL G+WDQPTETIVL + +PSPLQ LAL +ADKAA LVESNERL+DAR GG+GY+D
Sbjct: 3 SSRFWAGSDDDSSEDASDAS---SVEEEKVKTANRWATVSDSESSDEGERVVKSAKDRAWDGMKAVIAKIGNSKKIGDWNGIQTEFENLNKMVDKAKMHIMKEGLPRFYVRTLAELEDFLFEALKDKEAQKKMSASNGRSLNRMKLTLRKHNKTYESQIAAYKADPDAPDAEDDAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETGAL-------------------------------------------KGRAKWLKTTVVTTKR----------------------------------PMSGETFDKKLLEVVASRGRKGTD--ARE-------LLAALEALAGKAKRSFGYARELGALMHLIAAQFDANRTIDDYMDVATWRSCHGQLGRVVAVLSAHPGK--GEDXXXXXXXXXXXXXAPNDDPDA---------------VKVVGNLLTFLARLEDEYVKSLQRINPHTHEYVSRLRDEAPLTDLAAGVQAYYVRVGDDKAAATVALLRVEHMYYKHESIASAVRDAQAYRANERDSSKSHPGAWLGAAT-----------AAATAPDDEVVG-DASASVRKLCEYVYAHGDDRCRTRALLCHVAHHALHGRFYVARDLLLMSHLQDTAYMSDVETQILYNRSMVMLGLCAFRNGLIHDAHACLAEICSSRVKELLAQGMQSARFSDKNPEQEKAERRRQTPYHMHINLDLLECCHLTAAMLLEVPNMSVEAGGAGGHKRPISRHFRKHLDIFNRQVFTGPPENTRDHVLCAAKALGVGDWKTCADLVLRLDVWALVPGAGEGDRVKAMIEDKIKAEALRTYLFAYSSAYDALSLPQLCDMFQLPKNVAHGLVSKMMINRELKGAWDQPTETIVLHRLEPSPLQALALHYADKAAALVESNERLLDARAGGHGYKD 824
BLAST of mRNA_S-ischiensis_contig10.1633.1 vs. uniprot
Match: A0A6U3ZAQ9_9STRA (Eukaryotic translation initiation factor 3 subunit C n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZAQ9_9STRA) HSP 1 Score: 695 bits (1793), Expect = 6.240e-231 Identity = 507/1014 (50.00%), Postives = 647/1014 (63.81%), Query Frame = 1
Query: 106 SKFWAAGSDSGXXXXXXXXXXXS-------LGGNVGQQRRQWAVDSDSESEDEVRVVRSAKDRSFEAIRGAVHKVKNGMKINDWNGIQTDFDECTKHIEKSKVMI-AKEGVPKFYVKLLTSLEDFLTNTLKDKAAVKKMSATNTRSLNRMKLHLRKHNKAYEKEIADCRAHPEAYGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKPKKPQRNLEDMDSDEWPSXXXXXXXXXXXXXXXXEDMPKGRARWLKKTPVDGKKKKKD--EKKAAKVDKGKKEKVIEVKG----------GKGALPKLDLNMAPEHLGRKLREVLASRGKKGSDPKARERGGGXXXXXXXXXXXXXXXGRETGRMGAIPILMYLVSAMFDTLRNIDDYMETAMWRSCQAHLSRVVILL---EEQPELQL--------GQLGN----EAQADLILRSSAAGADL--------------------DXXXXXXXXEEVKKTG-----ILKVVGTLATYAQKLDEEYNKSLQKINPHTQEYIMRLKDEAVLFELAGRVQAYYERIGEPSTAADMALSQAEHMYYQHDSIANKVRKAQAFTNKWGKVEDLHPACAAGAAT-GVVDAALAHPAAALGVPTVEVPER----DYSAVLRKLCVYVYRNGDDRTRTRAMLCHITHHALNDRFFEARDLLLMSHLQDNISQT-DVATQILYNRMMATLGLCAFRQGLVQEAHDCLRDVCSSRVKELLAQGIQINRFQDKNPEQEKAERRRQMPYHTHINLDLLECCHLTSAMLLEVPNMAQES-----TELRRRVISKHFRRHMDIYSRQVFTGPPENIRDHVIAASKRLIEGDWRKCADLVLGLDMWNLIPGEGVAERVKDMVRAKIQEEALRTYLFTYSPYYESLSLPTLCEMFALDKRRAHSIISKMMINQELYGSWDQPTETIVLRKDDPSPLQLLALKFADKAANLVESNERLIDARTGGYGYRDDKGWGGG 2934
S+FWAAG XXXXXXXXXXX GG G + +W + DS+SED VRVV+SAK R+FE+ V +++N MKI D+ +Q F+E TK + KSK +I A GVP+F+V++L LEDF+ +L DKA KK+S TN R+LNRMKL LRKHNK Y+ + + R +P G S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXX KGRARWLKK D K+ KD EKK K +P + ++ P L +K+ EV+A RG+KG+D K R G +P L+++++A FD +R +DDYMET WRSC +L RV +L EE+ +L L G +G E + + A G + D E +K ++V G+LA + +LDEEYNKSLQKI+PHT EY+ RL+DEA L +L + QAYYERIG + AA++A + EH+YY+HDSIA +V +A F ++G+ LHPAC + T G VD + HPAA+ G P+VE + D + ++ LC YVY++G DR+RTRAMLCHI HHAL+DRF +ARDLLLMSHLQD IS DV+T IL+NRMM TLGL AFR G + +AH CL DVCS RV+ELLAQG+ RF DK+ EQEKAE+RRQ+PYH HINLDLLE CHLTSAMLLEVPNMA + + R RVIS+ FR++ DIY RQVFTGPPE RD+V+ A+K L++GDW+KC++L++GLD+W L+PG+ E+++ M+ KI+ E LRTYLF +S Y+SLSL LC MF L K HS++SKMMIN+ELY SWDQPTETIVLRK +PS LQ++AL++++K A+LVE+NERL+DA++G YGY+D + W GG
Sbjct: 2 SRFWAAGXXXXXXXXXXXXXXXXXXXXXXRFGGAAGAGKDKWVMSDDSDSEDSVRVVKSAKTRAFESFEANVKQIRNAMKIRDFAKVQNQFEELTKSMTKSKKLIDAHGGVPRFFVRILVDLEDFVKTSLADKAGFKKLSPTNGRALNRMKLTLRKHNKQYDAIMEEYRKNPVVSGSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGEL------KGRARWLKKVSTDTKRGPKDAEEKKRRAXXXXXXXXXXXXXXXXXXXXXXXTSKSIIP--ESSLTPSLLVKKIGEVVALRGRKGTDNKVVLR----------QLEGLSRLAARFGPRSEVPALIFVITAQFDLVRTLDDYMETKTWRSCAEYLGRVANILDGGEEKYKLDLPLPDEDAGGLMGGVVLPEGAGKMKAAAKAGGGAMAAVAADEKLINPHTGETETADERAERIRIETEEKMSPEELHTIRVPGSLALFLTRLDEEYNKSLQKISPHTIEYVARLRDEARLVDLQMKFQAYYERIGSTAEAAELAQLRVEHLYYRHDSIATQVDRASKFYERFGEASMLHPACVSDNDTRGSVDYSKVHPAASCGKPSVEDTDAAESVDSAKLIADLCTYVYQHGSDRSRTRAMLCHIYHHALHDRFLDARDLLLMSHLQDTISSAGDVSTMILFNRMMVTLGLAAFRLGRIWDAHQCLSDVCSGRVRELLAQGVSTGRFSDKSAEQEKAEKRRQIPYHQHINLDLLEACHLTSAMLLEVPNMAASAEGDAGSSRRTRVISRTFRKNHDIYDRQVFTGPPEQTRDYVMRAAKALMKGDWKKCSNLLVGLDVWKLVPGDDSIEKIRAMLVDKIKLEGLRTYLFAFSSQYDSLSLEQLCGMFELSKNEVHSVVSKMMINRELYASWDQPTETIVLRKVEPSSLQVMALQYSEKVASLVEANERLLDAKSGNYGYKDGEAWRGG 997
BLAST of mRNA_S-ischiensis_contig10.1633.1 vs. uniprot
Match: A0A7S2BS49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BS49_9STRA) HSP 1 Score: 676 bits (1744), Expect = 3.650e-228 Identity = 379/724 (52.35%), Postives = 474/724 (65.47%), Query Frame = 1
Query: 814 LEDMDSDEWPSXXXXXXXXXXXXXXXXEDMPKGRARWLKKTPVDGKKKKKD--EKKAAKV----DKGKKEKVIEVKGGKGALPKLDLNMAPEHLGRKLREVLASRGKKGSDPKARERGGGXXXXXXXXXXXXXXXGRETGRMGAIPILMYLVSAMFDTLRNIDDYMETAMWRSCQAHLSRVVILLEEQPELQLGQLGNEAQADLILRSSAAGADLDXXXXXXXXEEVKKTG------ILKVVGTLATYAQKLDEEYNKSLQKINPHTQEYIMRLKDEAVLFELAGRVQAYYERIGEPSTAADMALSQAEHMYYQHDSIANKVRKAQAFTNKWGKVEDLHPACAA--GAATGVVDAALAHPAAALGVPTVEVPERDYSAVLRKLCV-YVYRNGDDRTRTRAMLCHITHHALNDRFFEARDLLLMSHLQDNISQTDVATQILYNRMMATLGLCAFRQGLVQEAHDCLRDVCSSRVKELLAQGIQINRFQDKNPEQEKAERRRQMPYHTHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVISKHFRRHMDIYSRQVFTGPPENIRDHVIAASKRLIEGDWRKCADLVLG-LDMWNLIPGEGVAERVKDMVRAKIQEEALRTYLFTYSPYYESLSLPTLCEMFALDKRRAHSIISKMMINQELYGSWDQPTETIVLRKDDPSPLQLLALKFADKAANLVESNERLIDARTGGYGYRDDKGWGGGG 2937
L++MDSDEW S + KGRA+WLK V + +KD EK+AAK +K K K A + ++ L RK+ EV+A RG++ DP+ R R IP L +LVS+ FD R++D Y++ WRSC HLSRVV +L Q L LG G + AD++L A DL EE K G +K++G L T+ ++L+EEY K+L INPHT EY+ RL+ EA L L Q YYER+G+ AA MAL + EH YY+HDSIA V KAQ F KWG+ DLHPAC + A + V HPAA G P ++ D + ++++LC VY++GDDRTRTRAMLCHI HHAL+DRF++ARDLLLMSHLQ+NI TDV TQIL+NR M LGLCAFR GL+ EAH CL D+CSSR KELLAQG+Q R+ DKNPEQEKAERRRQ PYH HINL+LLE CHLT+AMLLEVPNMA E R RVIS+HFR++MD + RQVFTGPPEN+RDHV+ A+K L GDW++CADL+L +D+WNLIPGE A++VKDM++ KI+ EALRTYLF YS +Y+SLSLP LC MF L+KR AH +ISKMMINQE++ SWDQPTET+VL K +P+ LQ LAL++A+KA+ LVESNER +DA GG Y+DD G GGG
Sbjct: 1 LDEMDSDEWQSDSSSDSDSDDGGV---DPTLKGRAKWLKVNTVADTRVRKDASEKEAAKAKRAEEKLKXXXXXXXXXAKAATYAVAEDITASELSRKITEVVAQRGRRNMDPREINRN----------LSVLASAARRFSAKIEIPALFHLVSSYFDAQRDMDSYLDFKTWRSCYNHLSRVVNILNSQENLVLGMFGEDDMADMVLAQQGALKDLPEEEEEPA-EEAKGDGDGEDENTIKIIGNLVTFVKRLEEEYTKALIAINPHTSEYVTRLRMEAQLTHLCATTQQYYERVGDMGQAAVMALLRIEHTYYKHDSIAEAVFKAQKFAEKWGQYADLHPACLSPTAALSSEVKPETLHPAAMGGKPAIDAVFEDQAVLIKELCHRVVYKHGDDRTRTRAMLCHIAHHALHDRFYDARDLLLMSHLQENIGHTDVTTQILFNRAMVMLGLCAFRLGLIFEAHQCLSDICSSRYKELLAQGVQSMRYSDKNPEQEKAERRRQTPYHMHINLELLEGCHLTAAMLLEVPNMATEELSERPRVISRHFRKYMDFFDRQVFTGPPENVRDHVLTAAKSLTTGDWKRCADLILDKMDIWNLIPGENAAQKVKDMLKDKIKCEALRTYLFAYSAHYDSLSLPQLCVMFDLEKRIAHGVISKMMINQEVHASWDQPTETVVLHKVEPTHLQSLALQYAEKASMLVESNERFLDASVGGQSYKDDWGNRGGG 710
BLAST of mRNA_S-ischiensis_contig10.1633.1 vs. uniprot
Match: A0A7S4IUV2_9STRA (Eukaryotic translation initiation factor 3 subunit C n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IUV2_9STRA) HSP 1 Score: 683 bits (1762), Expect = 4.450e-225 Identity = 512/1011 (50.64%), Postives = 656/1011 (64.89%), Query Frame = 1
Query: 97 SMSSKFWAAGSDSGXXXXXXXXXXXSLGGNVGQQRR----QWAVDSDSESEDEVRVVRSAKDRSFEAIRGAVHKVKNGMKINDWNGIQTDFDECTKHIEKSKVMIAKEG-VPKFYVKLLTSLEDFLTNTLKDKAAVKKMSATNTRSLNRMKLHLRKHNKAYEKEIADCRAHPEAYGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKPKKPQRNLEDMDSDEWPSXXXXXXXXXXXXXXXXEDMPKGRARWLKKTPVDGKKKKKDEKKAAKVDKGKKEKVIEVKG---------GKGALPKLDLNMAPEHLGRKLREVLASRGKKGSDPKARERGGGXXXXXXXXXXXXXXXGRETGRMGA---IPILMYLVSAMFDTLRNIDDYMETAMWRSCQAHLSRVVILLEEQPE-LQLGQLG-NEAQADLILRSSAAGADLDXXXXXXXXE------------------------------EVKKTGILK--------VVGTLATYAQKLDEEYNKSLQKINPHTQEYIMRLKDEAVLFELAGRVQAYYERIGEPSTAADMALSQAEHMYYQHDSIANKVRKAQAFTNKWGKVEDLHPAC-AAGAATGVV-DAALAHPAAALGVPTVEVPER---DYSAVLRKLCVYVYRNGDDRTRTRAMLCHITHHALNDRFFEARDLLLMSHLQDNISQT-DVATQILYNRMMATLGLCAFRQGLVQEAHDCLRDVCSSRVKELLAQGIQINRFQDKNPEQEKAERRRQMPYHTHINLDLLECCHLTSAMLLEVPNMAQESTE--------LRRRVISKHFRRHMDIYSRQVFTGPPENIRDHVIAASKRLIEGDWRKCADLVLGLDMWNLIPGEGVAERVKDMVRAKIQEEALRTYLFTYSPYYESLSLPTLCEMFALDKRRAHSIISKMMINQELYGSWDQPTETIVLRKDDPSPLQLLALKFADKAANLVESNERLIDARTGGYGYRDD 2916
S S+FWAAGS XXXXXXXXXXX +W ++S+SES +E RVVRSAKDR+F++ + V ++NGMKI D++ +QT+FD K + KSK +I + G VP+F+++LL LEDF+ ++L DK KK+S R+LNRMKL LRKHNK+YE + + R +P + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXX + KGRARWLKKT +K KD+ A+ K ++ K +P+ L A L RK++EV++SRG+KG+D ++ R R R G +P+LM++V+A FD LR +DD+M+ W+SC +L R+ LE+ E LG L +EA DL+ +A G + XXXXXXXXE ++K G + V+G+L+ + +LDEEY KSLQ+I+PHT EY+ RL+DEA L EL G+ QAYY RIG AA++A + EH+YY+HD+IA++V +A F +G+ E LHPAC +A A G D + +HPAAALG P+V D + ++ LC YVY+ G DR++TR+MLCHI HHAL+DRF EARDLLLMSHLQD IS DV+T +L+NRMM T+GL AFR G + +AH CL DVCS RV+ELLAQG+ RF DK EQEKAERRRQ PYH HIN+DLLE CHLTSAMLLEVPNMAQ R RVIS+ FR+H DIY R VFTGPPE RD+V+ AS+ L+ GDW+KC++L+ GL++W+LIPGE E++K ++ KI+ E LRTYLF YS Y+SLSL TLC+MF + K HS++SKMMIN EL+ SWDQPT TIVLR +PS LQ+LAL+FA+KAA LVE+NERL+DA++G YG+RD+
Sbjct: 76 STMSRFWAAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWVMESESESSEEERVVRSAKDRAFDSFQTHVKAIRNGMKIRDFSRMQTEFDALVKVVAKSKTIIQRHGGVPRFFIRLLCDLEDFVKSSLADKVGFKKLSPAQGRALNRMKLTLRKHNKSYEAAMTEYRMNPVVSESASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADEFAQL-KGRARWLKKTTAVVEKVTKDKAGRAEARKAARDAAXXXXXXXXXXGAGPSKSLIPEKALTAAT--LDRKVKEVVSSRGRKGTDNRSILR-------------QLEGLSRLAVRFGPRFEVPVLMHVVTAQFDLLRTMDDFMDAKTWKSCAGYLWRIASALEDGEEKYTLGHLSADEAADDLLATQAAVGGKMXXXXXXXXXEGAMAAVAADEKLINPETGESETEDERAERIRLEKEGKMTPEELRTIIVIGSLSLHLTRLDEEYIKSLQRISPHTSEYVTRLRDEARLVELLGKAQAYYTRIGSKPEAAELAQLRVEHLYYRHDTIADQVDRAALFHETYGEAELLHPACISADADEGKSNDYSKSHPAAALGRPSVATESEAPVDSAQLITDLCTYVYKYGSDRSKTRSMLCHIFHHALHDRFLEARDLLLMSHLQDTISNAGDVSTMLLFNRMMVTMGLAAFRLGRIWDAHQCLGDVCSGRVRELLAQGVSSGRFSDKTDEQEKAERRRQTPYHMHINMDLLEACHLTSAMLLEVPNMAQAGAAGGDDTGGPRRARVISRQFRKHHDIYDRSVFTGPPEQTRDYVMVASRALMRGDWKKCSELLGGLEVWDLIPGEESGEKIKSILVEKIKVEGLRTYLFAYSSQYDSLSLETLCKMFDMGKNEVHSVVSKMMINHELHASWDQPTGTIVLRNVEPSALQVLALQFAEKAAGLVEANERLLDAKSGTYGFRDE 1070
BLAST of mRNA_S-ischiensis_contig10.1633.1 vs. uniprot
Match: A0A485LEA6_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LEA6_9STRA) HSP 1 Score: 645 bits (1665), Expect = 6.500e-213 Identity = 453/955 (47.43%), Postives = 613/955 (64.19%), Query Frame = 1
Query: 100 MSSKFWAAGSDSGXXXXXXXXXXXSLGGNVGQQRRQWAVDSDSESEDEVRVVRSAKDRSFEAIRGAVHKVKNGMKINDWNGIQTDFDECTKHIE--KSKVMIAKEGVPKFYVKLLTSLEDFLTNTLKDKAAVKKMSATNTRSLNRMKLHLRKHNKAYEKEIADCRAHPEAYGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKPKKPQRNLEDMDSDEWPSXXXXXXXXXXXXXXXXEDMPKGRARWLKKTPVDGKKKKKDEKKAAKVDKGKKE-KVIEVKGGKGALPKLDLNMAPEHLGRKLREVLASRGKKGSDPKARERGGGXXXXXXXXXXXXXXXGRETGRMGAIPILMYLVSA-MFDTLRNIDDYMETAMWRSCQAHLSRVVILLEEQPELQLGQLGNEAQADLILRSSAAGADLDXXXXXXXXEEVK---------KTGILKVVGTLATYAQKLDEEYNKSLQKINPHTQEYIMRLKDEAVLFELAGRVQAYYERIGEPSTAADMALSQAEHMYYQHDSIANKVRKAQAFTNKWGKVEDLHPACAAGAATGV--VDAALAHPAAALGVPTVEVPERDYSAVLRKLCVYVYRNGDDRTRTRAMLCHITHHALNDRFFEARDLLLMSHLQDNISQTDVATQILYNRMMATLGLCAFRQGLVQEAHDCLRDVCS-SRVKELLAQGIQINRFQDKNPEQEKAERRRQMPYHTHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVISKHFRRHMDIYSRQVFTGPPENIRDHVIAASKRLIEGDWRKCADLVLGLDMWNLIPGEGVAERVKDMVRAKIQEEALRTYLFTYSPYYESLSLPTLCEMFALDKRRAHSIISKMMINQELYGSWDQPTETIVLRKDDPSPLQLLALKFADKAANLVESNERLIDARTGGYGYRDD 2916
M+S+FWA S +V Q +W VDS+SES+D+VRVV SAKD++ +A++ AV +K +KI+DW+ IQT+FD K I K+K IA+ G PK+Y++ + LED +T+ LK+K K S N+++L RMK ++KHN+ KE+ + R P A+ +S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + + + SD+ KGRARWLKK P + +K+D +AA+ +G KE K E+K A+ + D+ ++ + K++EV+A RGK+G+D R G + M++V MFDT ID + T +W+ + L ++ +LE P +L L +E QADLI R+ A A D XXXX V G++KV G LA + ++L++EY KSLQ+ +PHT EYI RL DEA+L LA RVQAY++R + AA +AL QAE MYY+HDSIAN + + A +G+ LHPAC + AT + DA++ HPA+ G P V+V D L +LC+YVY+ DDR++TRAMLCHI HHAL+DRF EARDLLLMSHLQD I+ TD+ATQIL+NRMMA LGLCAFR GLV EAH CL ++C+ S+ KELLAQG+ R Q++NPE+E+ E+RRQ+PYH HINL+LLE HLTSAMLLEVPNM T+ RRRV+SK FR+ ++ + R VF GPPEN RDHV+AA+K + +G W+K DL+ GL +W L+PG G A +VK +V+ KIQ E+LR+YL +S Y++L+L LC MF LD + HS++SKMMIN+EL G+WDQ +++IVL K + + LQ LAL++++K +VE+NER++D R+ +DD
Sbjct: 1 MASRFWAGSSSESGSDNESAASEVE---DVKIQANRWDVDSESESDDDVRVVVSAKDKALQALQLAVDAIKRYLKISDWSKIQTEFDAMEKQISNAKAKQAIAQNGYPKYYIRCMAELEDEITDKLKNKT---KTSKENSKALIRMKGKIKKHNETIAKELTEYRKDPSAF-ESEEEEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEWAESSDSSSSDDEAGVGEL----------------KGRARWLKKVPTGTENRKRD--RAARPARGPKEQKTTELKK---AVVEEDMKLSKKGFDAKIKEVIALRGKRGTD----------LGEQLSTLRKLVNYSRRLGPARELVATMHMVGTQMFDTSSKIDKVLSTRLWKLAHSDLQNILDILERNPGFKLAPLTSEDQADLI-RAGATKASADAANDXXXXXXVTIVDSLPAAGAKGVIKVSGDLAAFVERLNDEYVKSLQQTDPHTTEYIGRLYDEALLSALAKRVQAYFKRQDDHVRAASVALIQAELMYYKHDSIANALHVSNAKRAIYGEPALLHPACESQNATPLKKFDASVVHPASVQGAPRVDVEAMDVEKDLSELCLYVYKYADDRSKTRAMLCHIYHHALHDRFHEARDLLLMSHLQDTIAHTDIATQILFNRMMAQLGLCAFRLGLVWEAHACLSEICTGSKTKELLAQGMASFRHQERNPEEERLEKRRQVPYHMHINLELLEVAHLTSAMLLEVPNMVLSRTQDRRRVLSKAFRKLLEFHDRLVFAGPPENTRDHVVAAAKFMSQGQWQKSVDLICGLPVWELLPGAGTAAKVKALVQHKIQVESLRSYLVAFSEEYDALNLTHLCAMFELDTKTVHSVVSKMMINEELQGAWDQGSQSIVLHKVERTRLQQLALQYSEKIGVIVENNERMLDLRSASTSSKDD 916 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig10.1633.1 >prot_S-ischiensis_contig10.1633.1 ID=prot_S-ischiensis_contig10.1633.1|Name=mRNA_S-ischiensis_contig10.1633.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=1025bp MSSKFWAAGSDSGSESDSDSDSDSSLGGNVGQQRRQWAVDSDSESEDEVRback to top mRNA from alignment at S-ischiensis_contig10:3286797..3306977+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig10.1633.1 ID=mRNA_S-ischiensis_contig10.1633.1|Name=mRNA_S-ischiensis_contig10.1633.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=20181bp|location=Sequence derived from alignment at S-ischiensis_contig10:3286797..3306977+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig10:3286797..3306977+ >mRNA_S-ischiensis_contig10.1633.1 ID=mRNA_S-ischiensis_contig10.1633.1|Name=mRNA_S-ischiensis_contig10.1633.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=6150bp|location=Sequence derived from alignment at S-ischiensis_contig10:3286797..3306977+ (Schizocladia ischiensis KU_0333)back to top |