mRNA_S-ischiensis_contig1.1121.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig1.1121.1
Unique NamemRNA_S-ischiensis_contig1.1121.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig1.1121.1 vs. uniprot
Match: A0A7L4XQX3_SACJA (Carbohydrate sulfotranserase n=2 Tax=Saccharina japonica TaxID=88149 RepID=A0A7L4XQX3_SACJA)

HSP 1 Score: 159 bits (403), Expect = 1.260e-38
Identity = 96/253 (37.94%), Postives = 131/253 (51.78%), Query Frame = 2 
Query: 1727 IRVVILAQGRSGSTLTGELFRHNPGVLYFYEPCRGM-GVGLNGAKWKFQQLRGEACVAQSLRFLTCQFTERDSERVGADYNAADRGSPEVFALARAVKANNREAFQSAHAALMNKCHTSRAVVIKEIRFAAIYPSLRMS-PGLKIVHLVRDPRGVVHSLTRTFLASKGRSAVSHAEKVARG----VCQVYHDQAEGGSELDPSRYKLLRYEDMVREVLGTADTLHQWVGLGPAPQEVEEWVDQNTKKDNCAGG 2467
            I V+I+A GRSGSTL G+LF+ N  VLYFYEPCR + G  ++G +          C+A   R   C F+  DS  +  D N+   GSP + +L   + A+ R+ F  AH  L++ C  S+AVV+K IR             GLK++HLVRDPRGVV S    F  S G S  + +  +A      +C  Y +Q +   +L   RY  +RYED+          ++ W GLG  P  V EWV+ NT    C GG
Sbjct:   42 IGVLIMAVGRSGSTLVGQLFQQNKDVLYFYEPCRKLSGTDIDGLE----------CLAFLQRLTQCTFSAEDSAWIADDANSVKNGSPALKSL---LAASGRKEFAEAHERLVDTCINSKAVVVKSIRLGVGLGGRDYDLGGLKVLHLVRDPRGVVRSQREHFGISWGASNDADSATIAHAGGASICGSYRNQLDSSKKLGDDRYLRVRYEDIATSPELAVAFIYYWCGLGTVPASVSEWVEVNTNMPTCDGG 281
[Close]
BLAST of mRNA_S-ischiensis_contig1.1121.1 vs. uniprot
Match: D7FWT3_ECTSI (Sulfotransferase, C-terminal Sulfotransferase, N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT3_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 1.380e-32
Identity = 105/303 (34.65%), Postives = 142/303 (46.86%), Query Frame = 2 
Query: 1691 LAQADPSSQTNAIRVVILAQGRSGSTLTGELFRHNPGVLYFYEPCRGMGVGLNGAKWKFQQLRGEACVAQSLRFLTCQFTERDSERVGADYNAADRGSPEVFALARAVKANNREAFQSAHAALMNKCHTSRAVVIKEIRF--AAIYPSLRMSPGLKIVHLVRDPRGVVHS---LTRTFLASKGRSAVSHAEKVARG--------VCQVYHDQAEGGSELDP--SRYKLLRYEDMVREVLGTADTLHQWVGLGPAPQEVEEWVDQNTKKDNCAGGGRLPEGRRALREISDGDSLQTGAITDTSP 2554
            L +++PSS      ++ILAQGRSGST+ GELFRHN  +LYFYEPCR  G G+ G   +   + G  C A   R L C+FT +D++ + AD  AA+  SP V    RA                        AVV+K IR       P    S GL ++ LVRDPRGVV+S   L      + G        + AR         VC+ Y  Q +   +L P  S+Y  LRYED        A+ ++   GLG  P  V  W++ NT+   C       E     R ++  +S+  GAI D +P
Sbjct:   60 LVESEPSSPEG---ILILAQGRSGSTMLGELFRHNEDLLYFYEPCRQRGQGVLGGLHETSSVGGPECFALIRRLLRCEFTLQDTDGISADRAAAEASSPVVEEPTRAT-----------------------AVVVKSIRLHDGLDGPEYDTS-GLHVLQLVRDPRGVVNSQMGLWNNPSKTGGNGGDVDPAQAARKSGRTLGAVVCKSYRKQLDSFQQLGPESSKYLRLRYEDFTTLPKVVAELVYCRFGLGEVPATVTGWINYNTRMPACK------ESDNPTRRLAALNSIVLGAIDDETP 329
[Close]
BLAST of mRNA_S-ischiensis_contig1.1121.1 vs. uniprot
Match: A0A6H5JR69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR69_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 1.430e-32
Identity = 110/329 (33.43%), Postives = 146/329 (44.38%), Query Frame = 2 
Query: 1691 LAQADPSSQTNAIRVVILAQGRSGSTLTGELFRHNPGVL----------------------------YFYEPCRGMGVGLNGAKWKFQQLRGEACVAQSLRFLTCQFTERDSERVGADYNAADRGSPEVFALARAVK------ANNREAFQSAHAALMNKCHTSRAVVIKEIRFAAIYPSLRM----SPGLKIVHLVRDPRGVVHS---LTRTFLASKGRSAVSHAEKVARGVCQVYHDQAEGGSELDPSRYKLLRYEDMVREVLGTADTLHQWVGLGPAPQEVEEWVDQNTKKDNCAGGGRLPEGRRALREISDGDSLQTGAITDTSP 2554
            L +++PSS      ++ILAQGRSGST+ GELFRHN   L                            YFYEPCR  G G+ G   +   + G  C A   R L C+FT +D++ + AD  AA+  SP V    RA +      A  +EA   AH  +M  C +SRAVV+K IR   +Y  L      + GL ++ LVRDPRGVV+S   L        G         VAR   Q           L   +Y  LRYED        A+ ++   GLG  P  V  W++ NT+   C       E     R ++  DS+  G I D +P
Sbjct:   60 LVESEPSSPEG---ILILAQGRSGSTMLGELFRHNEKCLPVCTHTQTSSQPAAPLTCSHSFLHKNHLYFYEPCRQRGHGVLGGLHQTSSVGGPECFALVRRLLRCEFTLQDTDGISADRAAAEASSPAVEEPTRATRDGGTEVAKRQEALHVAHETIMEACKSSRAVVVKSIR---LYDGLNGQDYDTSGLHVLLLVRDPRGVVNSQMGLWNNPSKIGGNGGDVDPAHVARNTAQT----------LGAVKYLRLRYEDFTTLPKVVAELVYCRFGLGEVPATVMGWINYNTRMPACN------ESDNPTRRLAALDSIMLGTIDDETP 366
[Close]
BLAST of mRNA_S-ischiensis_contig1.1121.1 vs. uniprot
Match: UPI00112A5A9E (carbohydrate sulfotransferase 6-like n=1 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI00112A5A9E)

HSP 1 Score: 97.4 bits (241), Expect = 1.380e-17
Identity = 85/311 (27.33%), Postives = 137/311 (44.05%), Query Frame = 2 
Query: 1691 LAQADPSSQTNAIRVVILAQGRSGSTLTGELFRHNPGVLYFYEPCRGMGVGLNGAKWKFQQLRGEACVAQSLRFL-----TCQFT---------ERDSERVGADYNAADRGSPEVFALARAVKAN----NREAFQSAHAALMNKCHTSRAVVIKEIRFA---AIYPSLR-MSPGLKIVHLVRDPRGVVHSL-------TRTFLASKGRSAVSHAEKVARGVCQ----VYHDQAEGGSELDPSRYKLLRYEDMVREVLGTADTLHQWVGLGPAPQEVEEWVDQNTKKDNCAGGGRLPEGRRALREISDGDSL 2524
            L Q D  S+    +++IL+  RSGS+  G+LF  NP V Y  EP R        A W     +    +  S+R L     +C  +         +  SE  G   + A    P   A  R+   N    N+   +S    +   C +   V +KE+RF     +YP LR  S  LKI+HLVRDPR ++ S        T   + S+G+S+  +A  V + +C+    +Y    +        RY+++R+ED V++ L    +L+++VGL  +  ++E WV   T        G +PE +  +    D   +
Sbjct:   99 LPQLDSKSRAAKTQLLILSTWRSGSSFLGQLFNQNPEVFYLLEPTR--------AVWFTMPQKNPYQLHPSIRDLVKFIFSCNMSAFLPYLPKGQFISELFGWHESRALCSPPACHAQQRSDIINRPKCNKTCLKSPFEKMEEACRSYSHVAVKEVRFLDLEVLYPLLRDPSLNLKIIHLVRDPRAILSSRQYFLELETDDAIISRGQSSSINATSVIQEICKGQVRIYRTATQNPPTFLKDRYRMVRFEDFVKDPLANIKSLYEYVGLTMS-SKLETWVYNITH-------GTIPENKTFMHFTGDSKKI 393
[Close]
BLAST of mRNA_S-ischiensis_contig1.1121.1 vs. uniprot
Match: A0A6P7XKP0_9AMPH (Sulfotransferase n=1 Tax=Microcaecilia unicolor TaxID=1415580 RepID=A0A6P7XKP0_9AMPH)

HSP 1 Score: 95.5 bits (236), Expect = 3.730e-17
Identity = 90/305 (29.51%), Postives = 141/305 (46.23%), Query Frame = 2 
Query: 1643 QLMLCLFSCG-RLTSSFLA-------QADPSSQTNAIRVVILAQGRSGSTLTGELFRHNPGVLYFYEPCRGMGVGLNGAKWKFQQLRGE---------AC-VAQSLRFLT-CQFTERDSERVGADYNAADRGSPEVFALARAVKAN----NREAFQSAHAALMNKCHTSRAVVIKEIRFA---AIYPSLR-MSPGLKIVHLVRDPRGVVHSL-------TRTFLASKGRSAVSHAEKVARGVC----QVYHDQAEGGSELDPSRYKLLRYEDMVREVLGTADTLHQWVGLGPAPQEVEEWVDQNT 2443
            +L LCL S    LT S+L        + D + +     ++IL+  RSGS+  G+LF  NP V Y  EP R   V     K    QL            +C ++  L ++   QF    SE  G   + A    P   A  R+   +    NR   ++    +   C +   VV+KE+RF     +YP L   S  LKI+HLVRDPR ++ S        T   + S+G S+++++  V + +C    Q+YH  ++        RY+L+R+ED V++ L    +L+++VGL  +   +E WV   T
Sbjct:   25 RLRLCLLSVTVLLTVSYLTWKPCRLPEKDHNRRATKTHLLILSSWRSGSSFLGQLFNQNPEVFYLLEPTRA--VWFTMPKMNPYQLHPPLRDLVRSIFSCNMSAFLPYMPRAQFI---SELFGWHESRALCSPPACGAQQRSDIIDRPKCNRSCPKNPFEKMEEACRSYSHVVVKEVRFLDLEVLYPLLSDPSLNLKIIHLVRDPRAILSSRQYFLELETDDAIISRGHSSMTNSTPVMQVICKGQVQIYHTASQNPPPFLKDRYRLIRFEDFVKDPLANIKSLYEYVGLNMS-SNLESWVHNIT 323
[Close]
BLAST of mRNA_S-ischiensis_contig1.1121.1 vs. uniprot
Match: A0A8J9WEG2_BRALA (CHST1 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9WEG2_BRALA)

HSP 1 Score: 92.8 bits (229), Expect = 1.030e-15
Identity = 80/261 (30.65%), Postives = 121/261 (46.36%), Query Frame = 2 
Query: 1718 TNAIRVVILAQGRSGSTLTGELFRHNPGVLYFYEPCRGMGVGLNGAKWKFQQLRGEACVAQSLRFLTCQFTE-------RDSERVGADYNAADRGSPEVFALARAVKANNREAFQSAHAALMNK-CHTSRAVVIKEIRFAAI--YPSLRMSPGL--KIVHLVRDPRGVVHSLTRTFLASKGRSAVSHAEKVARGVC--QVYHDQAEGGSELD--PSRYKLLRYEDMVREVLGTADTLHQWVGLGPAPQEVEEWVDQNTKKD 2452
            ++ + V+I    RSGS+  GELF  NP V Y +EP + +   ++     +Q L+ +A V      +TC FT           ER     + A    P      R   +   +  +     +++  C ++R V +K IR   I    SL  +P L  K+VHL+RDPRG+ +S        KG  A     +    +C  + Y+ Q  G S L     RYKL RYED+ +  L     L+ +VGL P PQ V +W+  NT++D
Sbjct:  271 SDPVHVIIFTNRRSGSSFLGELFNQNPDVFYLFEPLKALEQRVS-----YQNLQMQA-VPTLGDMMTCNFTGLGYYLNFTSRERHHRTSSRALSSPPLCPTSIRWSPSAKLQGCRKLSPDMVSDVCRSNRHVAVKTIRLVDIKSLASLVRNPRLNVKVVHLIRDPRGIYNSRVNEKRREKG--APDTVAEQMNFLCKREAYNLQV-GRSPLPWLTGRYKLFRYEDIAQRPLQQVQLLYDFVGL-PLPQHVTQWIKDNTQED 521
[Close]
BLAST of mRNA_S-ischiensis_contig1.1121.1 vs. uniprot
Match: UPI0016021AC9 (carbohydrate sulfotransferase 1-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016021AC9)

HSP 1 Score: 92.4 bits (228), Expect = 1.330e-15
Identity = 86/276 (31.16%), Postives = 126/276 (45.65%), Query Frame = 2 
Query: 1691 LAQADPSSQ-TNA-----IRVVILAQGRSGSTLTGELFRHNPGVLYFYEPCRGMGVGLNGAKWKFQQLRGEACVAQSLRFLTCQFTE-------RDSERVGADYNAADRGSPEVFALAR-AVKANNREAFQSAHAALMNKCHTSRAVVIKEIRFAAI--YPSLRMSPGL--KIVHLVRDPRGVVHSLTRTFLASKGRSAVSHAEKVARGVC--QVYHDQAEGGSELD--PSRYKLLRYEDMVREVLGTADTLHQWVGLGPAPQEVEEWVDQNTKKD 2452
            L Q+D SSQ TN      + V+I    RSGS+  GELF  NP V Y +EP + +   ++     +Q L+ +A        +TC FT           ER+    + A    P      R +  A  +   + +   + + C + + V +K IR   I    SL  +P L  K+VHL+RDPRG+ +S        KG  A     +    +C  + Y+ Q  G S L     RYKL RYED+ +  L     L+ +VGL P P  V +W+  NT+ D
Sbjct:  245 LNQSDASSQRTNEKPSAPVHVIIFTNRRSGSSFLGELFNQNPDVFYLFEPLKALEQRVS-----YQNLQVQAAPTLG-DMMTCNFTGLRYFLNFTSKERLHRTSSRALSSPPLCPTSIRWSPSAKLQGCRELSPDMVSDVCRSKQHVAVKTIRLVDIKSLASLVRNPKLNVKVVHLIRDPRGIYNSRVNEKRGEKG--APDTVAEQMNFLCKREAYNLQV-GRSPLPWLAGRYKLFRYEDIAQRPLQQVQLLYDFVGL-PLPSHVTQWIMDNTQAD 510
[Close]
BLAST of mRNA_S-ischiensis_contig1.1121.1 vs. uniprot
Match: UPI0001CBB155 (carbohydrate sulfotransferase 1-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBB155)

HSP 1 Score: 89.7 bits (221), Expect = 1.410e-15
Identity = 75/272 (27.57%), Postives = 117/272 (43.01%), Query Frame = 2 
Query: 1730 RVVILAQGRSGSTLTGELFRHNPGVLYFYEPCR---------GMGVGLNGAKWKFQQLRGE-AC------VAQSLRFLTCQFTERDSERVGADYNAADRGSPEVFALARAVKANNREAFQSAHAALMNKCHTSRAVVIKEIRFAAI---YP-SLRMSPGLKIVHLVRDPRGVVHSLTRTFLASKGRSAVSHAEKVARGVCQVYHDQAEGGSELDP---SRYKLLRYEDMVREVLGTADTLHQWVGLGPAPQEVEEWVDQNTKKDNCAGGGRL 2476
            RV ++A  R+GST TGEL   NP + Y +EP R          +G  L  +  K + LR   AC      V     +    +  +  +     +      +PEV A                       C   + V +K IR  ++    P ++R    LK++HL+RDPRGV  S       S  ++  +      +  CQ   +  E  S L      RYK +RYED+  E L +A+ +++++ L P P  V++W+D+NTK DN    G +
Sbjct:   30 RVALVAAFRTGSTFTGELLNQNPDIFYLFEPFRLVRDIIAVDAIGKDLENST-KLELLRDIFACRFPAYFVHHIRHWGLAVYESKALKNACMLHGGCANTTPEVLA---------------------ETCDMYKHVAMKVIRLQSLELLQPLAVRDEINLKVLHLIRDPRGVASSRKYFHKGSVNKTITNIIIDPMKEYCQCAVEMIEFSSNLPDWLRGRYKRIRYEDIAVEPLNSANRIYKFLNL-PLPASVKDWIDKNTKSDNVKSKGNM 278
[Close]
BLAST of mRNA_S-ischiensis_contig1.1121.1 vs. uniprot
Match: UPI0001CB9883 (carbohydrate sulfotransferase 1-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CB9883)

HSP 1 Score: 90.5 bits (223), Expect = 1.550e-15
Identity = 74/280 (26.43%), Postives = 120/280 (42.86%), Query Frame = 2 
Query: 1691 LAQADPSSQTNAIRVVILAQGRSGSTLTGELFRHNPGVLYFYEPCRGMGVGLNGA--------KWKFQQL------RGEACVAQSLRFLTCQFTERDSER-VGADYNAADRGSPEVFALARAVKANNREAFQSAHAALMNKCHTSRAVVIKEIRFAAIY---PSLRMSPGLKIVHLVRDPRGVVHSLTRTFLASKGRS--AVSHAEKVARGVCQVYHDQAEGGSELDP-----SRYKLLRYEDMVREVLGTADTLHQWVGLGPAPQEVEEWVDQNTKKDN 2455
            + + D     + +RVV++A  R+GST TG+L   +P + Y +EP R +   +             KF+ +      R  A     +R       E +S + V   Y      +PE                      L   C     + +K IR  ++    P +R    LK++HLVRDPRGVV S    +  +  RS   + H     +  CQ   +     S  DP      RYK+LRYED   + + +  ++++++ L P P+ V +W+D NTK+D+
Sbjct:   74 ITKPDSGHTQSRLRVVLVAAFRTGSTFTGQLLNQDPRMFYLFEPFRVVSDMIKNGDIDKSLENSTKFELIENIFNCRFPAYFVHHIRRWGLAAHESNSLKGVCNQYGGCKNTTPEK---------------------LSESCTMYEHIGVKVIRLESLQLLEPLVRYDTNLKVLHLVRDPRGVVSSRKYMYKNANNRSINTMGHLRADLKAYCQRMVEMLRVVS--DPPEWLEGRYKILRYEDTATDPINSVKSIYKFLNL-PLPENVTDWIDNNTKEDH 329
[Close]
BLAST of mRNA_S-ischiensis_contig1.1121.1 vs. uniprot
Match: H2YDE9_CIOSA (Sulfotransferase n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2YDE9_CIOSA)

HSP 1 Score: 90.1 bits (222), Expect = 3.960e-15
Identity = 87/279 (31.18%), Postives = 117/279 (41.94%), Query Frame = 2 
Query: 1733 VVILAQGRSGSTLTGELFRHNPGVLYFYEPCRGMGVGLNGAKWKFQQLRGEACVAQSLRFLTCQF---------TERDSERVGA-DYNAADRGSPEVFALARAVKANNREAFQSAHAA----LMNKCHTSRAVVIKEIRFAAIYPSLR---MSP--GLKIVHLVRDPRGVVHSLTRTFLASKGRSAVSHAEKVARGVCQVYHDQAEGGSELD--PSRYKLLRYEDMVREVLGTADTLHQWVGLGPAPQEVEEWVDQNTKKDNCAGGGRLPEGRRALREI 2506
            V+IL   RSGST TGELF  N  V Y +EP      G      K   L          + + CQF         T RD        +N   R   +V    +     + ++             + C  S+ VVIK IR   +  SLR    +P   +KIVHLVRDPRGV  S++       G S  S   +++R  C    D  E          +YKLLRYED+ R+ L T   L+++ GL   P  +E WV  NT   N +       G R LR++
Sbjct:   98 VIILTNHRSGSTFTGELFNQNDDVFYVFEPLIMAKSGCENEDGKVNMLE---------KMIRCQFHLISDLQGITPRDYATENCLSHNFCFRQKSKVLCSKQFCTQGDPQSCSRCEPVDPIMASDACGQSKVVVIKVIRMCHL-ESLRNLVTNPKFDIKIVHLVRDPRGVFQSVS-------GVSRKSPESEISR-TCGQTRDNLEAALSAKWLEGKYKLLRYEDLCRDPLQTTQDLYKFTGLDIKPN-IERWVQLNT---NGSARSMDARGYRILRKM 354
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1121.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7L4XQX3_SACJA1.260e-3837.94Carbohydrate sulfotranserase n=2 Tax=Saccharina ja... [more]
D7FWT3_ECTSI1.380e-3234.65Sulfotransferase, C-terminal Sulfotransferase, N-t... [more]
A0A6H5JR69_9PHAE1.430e-3233.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI00112A5A9E1.380e-1727.33carbohydrate sulfotransferase 6-like n=1 Tax=Rhina... [more]
A0A6P7XKP0_9AMPH3.730e-1729.51Sulfotransferase n=1 Tax=Microcaecilia unicolor Ta... [more]
A0A8J9WEG2_BRALA1.030e-1530.65CHST1 protein n=1 Tax=Branchiostoma lanceolatum Ta... [more]
UPI0016021AC91.330e-1531.16carbohydrate sulfotransferase 1-like n=1 Tax=Branc... [more]
UPI0001CBB1551.410e-1527.57carbohydrate sulfotransferase 1-like n=1 Tax=Sacco... [more]
UPI0001CB98831.550e-1526.43carbohydrate sulfotransferase 1-like n=1 Tax=Sacco... [more]
H2YDE9_CIOSA3.960e-1531.18Sulfotransferase n=1 Tax=Ciona savignyi TaxID=5151... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:7624825..7634054 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score95.5
Seed ortholog evalue5.8e-17
Seed eggNOG ortholog48698.ENSPFOP00000025894
Preferred nameCHST6
KEGG koko:K09670,ko:K09671
KEGG Pathwayko00533,map00533
GOsGO:0000139,GO:0001517,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0006022,GO:0006023,GO:0006024,GO:0006040,GO:0006044,GO:0006082,GO:0006464,GO:0006477,GO:0006790,GO:0006807,GO:0008146,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016740,GO:0016782,GO:0018146,GO:0019538,GO:0030203,GO:0031090,GO:0031224,GO:0031228,GO:0031300,GO:0031984,GO:0036211,GO:0042339,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0051923,GO:0071704,GO:0098588,GO:0098791,GO:1901071,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903510
EggNOG free text desc.Carbohydrate sulfotransferase 6-like
EggNOG OGs299AF@1,2QQMD@2759,38RXN@33154,3BBS1@33208,3CT40@33213,47YTP@7711,48Z0X@7742,49TRN@7898
COG Functional cat.G
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003
Hectar predicted targeting categoryother localisation
Exons7
Model size2646
Cds size1164
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.1121.1prot_S-ischiensis_contig1.1121.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig1 7624825..7630999 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815484.0612288-CDS-S-ischiensis_contig1:7624824..76250521622815484.0612288-CDS-S-ischiensis_contig1:7624824..7625052Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7624825..7625052 -
1695739727.8641717-CDS-S-ischiensis_contig1:7624824..76250521695739727.8641717-CDS-S-ischiensis_contig1:7624824..7625052Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7624825..7625052 -
1622815484.0752072-CDS-S-ischiensis_contig1:7626057..76261541622815484.0752072-CDS-S-ischiensis_contig1:7626057..7626154Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7626058..7626154 -
1695739727.8961275-CDS-S-ischiensis_contig1:7626057..76261541695739727.8961275-CDS-S-ischiensis_contig1:7626057..7626154Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7626058..7626154 -
1622815484.0880237-CDS-S-ischiensis_contig1:7626551..76266081622815484.0880237-CDS-S-ischiensis_contig1:7626551..7626608Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7626552..7626608 -
1695739727.9079869-CDS-S-ischiensis_contig1:7626551..76266081695739727.9079869-CDS-S-ischiensis_contig1:7626551..7626608Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7626552..7626608 -
1622815484.0996478-CDS-S-ischiensis_contig1:7628023..76281791622815484.0996478-CDS-S-ischiensis_contig1:7628023..7628179Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7628024..7628179 -
1695739727.9236155-CDS-S-ischiensis_contig1:7628023..76281791695739727.9236155-CDS-S-ischiensis_contig1:7628023..7628179Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7628024..7628179 -
1622815484.1097112-CDS-S-ischiensis_contig1:7629199..76293261622815484.1097112-CDS-S-ischiensis_contig1:7629199..7629326Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7629200..7629326 -
1695739727.9355342-CDS-S-ischiensis_contig1:7629199..76293261695739727.9355342-CDS-S-ischiensis_contig1:7629199..7629326Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7629200..7629326 -
1622815484.1193955-CDS-S-ischiensis_contig1:7630500..76309991622815484.1193955-CDS-S-ischiensis_contig1:7630500..7630999Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7630501..7630999 -
1695739727.9441304-CDS-S-ischiensis_contig1:7630500..76309991695739727.9441304-CDS-S-ischiensis_contig1:7630500..7630999Schizocladia ischiensis KU_0333CDSS-ischiensis_contig1 7630501..7630999 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815484.1309106-UTR-S-ischiensis_contig1:7630999..76321491622815484.1309106-UTR-S-ischiensis_contig1:7630999..7632149Schizocladia ischiensis KU_0333UTRS-ischiensis_contig1 7631000..7632149 -
1695739727.9524498-UTR-S-ischiensis_contig1:7630999..76321491695739727.9524498-UTR-S-ischiensis_contig1:7630999..7632149Schizocladia ischiensis KU_0333UTRS-ischiensis_contig1 7631000..7632149 -
1622815484.141037-UTR-S-ischiensis_contig1:7633724..76340541622815484.141037-UTR-S-ischiensis_contig1:7633724..7634054Schizocladia ischiensis KU_0333UTRS-ischiensis_contig1 7633725..7634054 -
1695739727.9688835-UTR-S-ischiensis_contig1:7633724..76340541695739727.9688835-UTR-S-ischiensis_contig1:7633724..7634054Schizocladia ischiensis KU_0333UTRS-ischiensis_contig1 7633725..7634054 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig1.1121.1

>prot_S-ischiensis_contig1.1121.1 ID=prot_S-ischiensis_contig1.1121.1|Name=mRNA_S-ischiensis_contig1.1121.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=388bp
MVGPTMRLCRGQMVYIQGNLMVGGRVLPRDYAVGCFVPAGRPCSAMARPM
RWGRQLMLCLFSCGRLTSSFLAQADPSSQTNAIRVVILAQGRSGSTLTGE
LFRHNPGVLYFYEPCRGMGVGLNGAKWKFQQLRGEACVAQSLRFLTCQFT
ERDSERVGADYNAADRGSPEVFALARAVKANNREAFQSAHAALMNKCHTS
RAVVIKEIRFAAIYPSLRMSPGLKIVHLVRDPRGVVHSLTRTFLASKGRS
AVSHAEKVARGVCQVYHDQAEGGSELDPSRYKLLRYEDMVREVLGTADTL
HQWVGLGPAPQEVEEWVDQNTKKDNCAGGGRLPEGRRALREISDGDSLQT
GAITDTSPKGPRGVQAAATQGRLPGPGLAGLGPGPGPE
back to top

mRNA from alignment at S-ischiensis_contig1:7624825..7634054-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig1.1121.1 ID=mRNA_S-ischiensis_contig1.1121.1|Name=mRNA_S-ischiensis_contig1.1121.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=9230bp|location=Sequence derived from alignment at S-ischiensis_contig1:7624825..7634054- (Schizocladia ischiensis KU_0333)
ACACTGGTCATCAGCTCCACCTCTTCAACCCCGATGCCCCGAGTGGGGAG
CTGGCGGTGGTCGAGGTTCAGAACGCGGAGGTTGCCGCAGAGGTAGCGGA
ACTGAAGGGGAAGATGGCTCTTGTAGAGGCTGTGTTGAGCGAGAGTGGGG
CCCATCTCGGCATCACCAAGCGGCCCGAGCTGCTCACTGAGAAGCGAGCC
TCGAGGAGAAGGGGCAGCTCCGCCGGAAGGAACATGATCTTCGTGAGAAG
GAACTGCGCCTGATGCCCATGCCACAGCCCGCTGCCCCAAGTGCGAACCA
AAGCGAACCAAAAGAACCGACACGACCCAAGTGAGCCACCACTCCACTGA
AACAGCCCCCCGGAGACTACGCGAGCTAAAGGTCCCCGTTCCGTCAGCAT
TGCGTTCCTGCCGTCGACCAGTGGCCTTGAAGCCGTCGTGGGCACCTGCT
CCCCAGCGCTAAGGGTTTTCCGTTTTCGTGGGGGAAGGGCTACTTGTTCG
TATGCACTGCACCCTGCTGGCTTACTAGGGTCCATGCTCTCCATCGATCA
AGGCATGTGGATGGCGCTTCCTCCATCGTCCACACCTCCGTGAATGCGCC
ATCTTGGCTTTTTGTTTTTCATGGACCCACTTGAGGTACTGTGGGGCCAA
TTTCGGTGCTTAGTTGTCTGCACTGTTGTAGTATTTCGTTCTTTCGTGTC
CTGGGCATGAGGTCTGGCGCTTGTGGTCTGGCGCACTTGCAGAATGTTGC
ATGTCTGCTTGTGCTGTTGAGGAGAGGCAATACTGTAGGGTACACAGCAC
GAAGGACGGCCATACGTGCACTTCAGAAAGATGTCGGGTACTGGATTGGC
TGCCGTGCCCACGGCTATGCGCACTCTGTTGCTGATTTCACGTGAGGCAC
AACTTCTGATTTTTGCACACCCCAGAAATTCGTGTTTCCCTGCTCTGTCC
TTGGTGGCCGCATTCAAGGCGAACTTAGTATTATTGCCATGCCTCTGCGC
CACTGCTGTTTCCTGGTGGTGCTAATGTGTTACACGTAGCTGTTTTTTTG
CCTTTGACTTTTGTGAGTGTTGTAAGAACTCCACACGGAACACTGACAAG
AGCAATCCCGCCTTAATGTACAGTACAGGTATTTCAGTGCAAACCTGTCA
AAGCAGTGAAAGTACCGGTCCTCTAGAAAGCAGCACGCCCATCACACGCT
TTCTCTATGTGTGCATCACACCTACCAGAGCTCACAGTAGAACAAACACC
CAGCATTCGTATCCAAGTTGAAGCTGACTTGCTATAGCAGGGTGCTGCGT
GCAATACTTGTGTACCACTTTCACGCTGTTGCTGGGGTGCAGTATTTCGT
GCACCACGTCTCACATGTACTGGCATGTCACGCCTAACAGAGCTTGCCAT
AGTCCACAGCGCATTGACCAACCAGAGTGTTTCTGGGTGGAAGCAGCTAT
GATCGGTATGAGTACTGTGCTGCAGCACCTGTACCAAGTTGCACACAGGT
ACACGTGTTCTCATCCGTGTACTATGGTACAGCAAGGAGTACACAATTTC
ACGCAAGTACCGTGTTGCAGTGTGTACCGGTAGTACAAGTTGTTGCACCG
TGGTCGTACAGGTACCACGATGCATCAAATGCTGCATCATTTCGCAAAGG
CGCTATGTGGCAGTACCAAGCACTGCAATTGCCCCAAGACAAACTCCTTG
CAAGTGCAAAGCACTGTAGTACCTGTACATTGCTCACCAATCACACACAC
CACTGCAATTCAAGTGCTGCACTGGTGCATAGCACACCACTCACGCTCCT
TCGTTGTGCATCAAAGCTGTCTCACACGGTTGTTTTTTGCTGTCAGTGTG
CTTCCTTGCTGGCAAATTTCACATTAGCCTGCTCTGCCCCCTTTGCGCAT
GATAGCCAGGACCTCGGCAGGAGCGCTTTTTGCTGCAAGCTAGGGTGGGG
GGTTGCTTGGGCTTGAAAGGCATCCGTCGCGTCGTCTTCCGCGACGCAGA
GCAGCACCAGGCCTTCTACACCAGCGAACAGCGAAATGAGTCCATTGGGT
ACGACGGAGAAGATCTTTGTATGCACCAGAAATTTGAGACAAAGACCAGA
GCGCTTGCATTTGCAAGTTTTCTCAGGACTATGAACGAGGAAGCTACGGT
TCAGGCACGGGTTGCAGTTTCTAGTGTTACTAGGGACACTGGATCTTGTG
GGACAGCGGTCGAGGGCTCACATTATTCTTTGGGAGACACAACATCACCT
CCGGAGAGCAGAAGATATGTCTGGGAGTGCAGATGTTGTTTCCCTCATCA
CTCAAGCTGAGGATCCATTGGTCAAGTATCAGTGTCTGGAGAATTCAGAT
GGCTTCTTTGTCAGTGGATTCAACAGGTGCCACATCAAGGATAAGTCTGT
GTGCAAGAGCAGTGACAAGGCCTGAGTGAATGATGCCAACAACATGTTGG
CCCTGTCGCCCAACATGCACCATGCATTTGACGGTTATGTTGGCAGCCAG
TCTCCGTCGTTTTGCCTCAGTGTTCATGGGATAGCGGCGCAGCCCGAGAT
GACAACGACTGGGCTTCGGTGGAAGGTGATGCTGGAGGTGCAGTGCAGGG
CGCGTGAGATGGCTCAGTACTTGTGGCCTCTCTTCAAGAGAGTAACAGAA
AAATTGGACGAGACCGTGCTCAGGACTTGGGTGTACGTCAAGAACCCCCA
TGACTCAAGGTGTACATTGAGTGGAAGTCGAAGGTCAAGGAGATGTGGCC
CTAGGCAATAAGAGTATACTGGTGTGTGTGCTCCGTGACGGGCACGGGCT
GAAGTTTCCCTTTCTTGCCTGATACTGACAGGCACGGTGTATGATACTCG
TTGTTGGTATTTGTACTCCGTGACGAGCACAGGCGGCCTACCTGTCTGTA
TGATGTGTACATATTTGTACTCCGTGACGGGCACAGGCTTCCTGTCTGTA
TGATGTGTTAGTATATGTACTCCCTGGCGTGGCAATTACCTGAAGCTGAC
TGTGCCGGCACGGATCATCTCGGCATAACTGGTTCGGGACATCAATGACT
GGTTCATGGTTGGCCCAACTATGAGATTATGCCGAGGACAAATGGTTTAC
ATACAAGGTAATTTAATGGTGGGGGGGCGTGTTTTGCCGCGAGACTACGC
AGTTGGTTGTTTTGTTCCTGCAGGGCGCCCGTGCAGTGCGATGGCGCGCC
CCATGCGCTGGGGCCGCCAGCTCATGCTGTGCTTGTTTTCATGCGGGAGG
CTTACGTCCTCCTTTCTGGCGCAAGCCGACCCAAGCAGTCAGACGAATGC
AATCCGAGTCGTCATCCTTGCTCAAGGGAGGTCGGGAAGTACATTAACGG
GGGAGCTCTTCCGCCACAACCCTGGCGTCCTCTACTTTTACGAACCCTGC
CGGGGCATGGGGGTCGGCCTCAACGGTGCCAAGTGGAAGTTCCAGCAGTT
GCGGGGAGAGGCGTGCGTTGCACAGTCCCTGCGTTTCCTGACGTGCCAGT
TCACGGAACGCGACTCCGAGAGGGTTGGCGCGGACTACAACGCGGCCGAC
AGGGGTTAGTAGTCCTTGGCTTCTGCCTAAGTCCCACAAACCTCGTCTCA
GGTAGCCCGATTGGTGTTGCTCGTCCGACACACACCGGAAGCATGCCCAA
GTTGACTGCGTGTGGCTCTGGGGCACACCGCGTACCGCATTTGCCTGTCA
TGTTGCCCCATGACATGGCTTTTGCGCAGAACAATTACCGTACTATATTC
CATCGGGCGGAATCACCCTGAAAAACTCAGCATAACCGGCCTTTGACCCT
GAGCAATGTTCCCGAGGGTTCTTGGGACAACACAACCAAGAGTCTGCAAC
AACGAGCTTGTGTAGCTAGCTCGCCGTTTATCTCCATGTCAAAAGGGCCG
TGGGATGCAAACTGACTCTGATGATTGAGGTCGGCAGCAAGCTTCCCCCC
CCCCCAATTTCGTTGACCGAAGCAATCGGTACTTAGACCTTGCCTCGCTG
TTGCACGTCCTAGTCGACTCTTGCACCGGTTTTGCCGCCCCCCCCCAGTG
CGTTGACCGAAGCAACGGGTACTTGGCCCTGGCCTCGCTATTGCTCGTCC
TTACTCCCCTGTTGCACCGGTGAACACACCTCCGTGTCCACCATGTAAAA
GGCCAACCGTCCGTTGTGGTCGATATGTACTGTAGTGGGTGGGCGTCCGG
GGGGGGGGGGTCCCCTTTGTGCGGTGTATATCCTAAGTGGTACTGCACAC
CTTGCACGACACTCTGCGCCTCTTACAGTTGTCCTCTACTTGGATGTGTA
TCCTATGCAGTCCAAGCGTGCACCACGCCCCTAACTTGCCTTGCTGCCCG
ATTTGCCGCCCGACGGGCCGAATGGATGAATGACTGACCGTGACAACGAG
GCATATCACCGTACCATTGTTGTTGTTCAAAGGTAGGCCCGGGATGGCCT
ACGGGTCCATCTGAAGGCGGCCAGTCTTCACTGTCCTCACACACACACAT
GCACACACGCTCTTCTCTCTCTGTCTCCCTCCCTCTCTCCCTCCCTCGCT
CGCTCGCTGCCCCCCTCCCCTCCTTCTTTCGCCCTCACTCACACGCTCAC
GCTTCTCTGTCTCCCTCCCTCCCACCTTTCCCCCCTCCCCTCCCTACCCG
CCCTGCCTGGTTCCCCGCCTTCCGTCTCGCACTCCCTCCCTCTCCCCGCC
TTTGTGTCGCGGGTGCGCTGCCGGCCAGGCTCACCGGAAGTGTTTGCCTT
GGCGCGGGCCGTGAAGGCAAACAACCGGGAAGCATTTCAGAGCGCGCACG
CCGCACTTATGAACAAATGTCACACTAGCCGGGCGGTGGTGATCAAGGAA
ATCAGGTGCGGGTAACGCACCTACTGCAGGCCTCGGAGGATGGCGGGCCA
CGAGTTCCTCGCTAAGCTGCAAGTGCATCCCAAGAAGGAGCTTAGTCAAA
TCATTGTCATTAGCTCATCCTCACAGTCCCGCGTTGGGATACTTGGATTA
CAACTTGTACATGGAGTAGCGTAGTAGCCGTCCCCATCTGGTGAGACCAA
ACCCAGGTACTGCAGTTGCTGTAAAGACAATAGGCTGTTGCTTGCCCGAC
GCTGTGCGCTGTGCTGGAGTACCTCCAAGTATCCTGTTTCGTGTCCCTCT
TGTGCCGTACGTACTACTACCAGTAGTAGTATATGTGTACAGTATGGGCT
GAGCTCACATCTAATGTGTCCCTCTTGTGCCGTACGTACTACTACTAGTA
GGAGTATATGCGTACAGTATGGGCTGAGCTCACATCTAGCAGAGCTTGCC
ATAGCCCAGAGACTGTTGATGGCGCACCTCTCTCAAGGTCGGAGTAATCT
ATGACAGCTGTAGCGTACGAGTGCTATTTATGCACGAGTACTCTACTTCC
AAGTGCAAAACGGAGCAATCCGTGATAGTGTACGAGTGCTAGTATTAGAT
ACTTCAAAGCACTTTGAGGTATTTCCGATTGTTCCAAGTCCAGTGCGTGC
CTAACGCTGTGCTTGTTTGGTAGCCCAGAGACCGTTGAGCACGCGCCCTT
TTCAGAGGTCGGAGCGCCCCCCCTCCTGTCCCTGGGTGTGTCGTAGCTAT
TGGAATTTCAGTACTTCCAAATATATTTAGAGCTCTAAATGCTCTGTCTC
GAACGAGGCGCGGGGTCAATGGTCTCGGGACTACGGCAACCACCACGTGA
GTACATATATATATACATGTATATGTAGGTACCAAGTAGTTCCCTTTCCA
AGTCTCCCAATACACTGCCCCCGCGGGCGCCAACTCCACCTGCCGCTCCC
AATCTTGCACCCAAGGTGATCCCCCCCCCACCCGGCCGGCCGGCCGGTGG
TTGTTGCCCCTCCCCCGGGTGGCAGGTTCGCGGCCATCTACCCCTCGCTG
AGGATGTCTCCGGGGCTAAAAATCGTTCACCTGGTTAGGGACCCCCGGGG
GGTGGTGCATTCCCTGACCCGGACTTTTTTGGCCAGCAAGGGGAGGTCCG
CTGTGTCGCATGCGGAGAAGGTTGCCCGCGGGTGAGCCAAACATCAATTC
ATGTTCGCGTACAAGTGCTTTGAAGTACTATGCAGTAAGTGCTTGGCAGT
AGGTTCTTGTGAAGCGTGGAAGTAAGAACGGGGGAGGGAGGGCCCCCGCT
CCGTCTCGACCGAGGCGCGTGGTCAATGATCTCGGGCACACACTATGCAG
TACTACAGTAGTAGTATGTTTTGCTTCTATATGCTCGAGCCAGGGGAGGG
AGGGGTCCTGCTCCGTCTCGAACGAGGCGCGTGGTCAATGGTCTCGGGAC
TACGGCAAGCACCACGTGAGTACACATGTATATATATATATATATACGCT
CGAGTACACACGAAGACATGTTGATACTCCAGTGTATGCGAGTACTTGTG
TGCTCACATCTAGCAGATATTGCCTTTGCCCGGAGGCGAATGACCACTCG
CCTCTTCCGAGAAGGTAATGTATGTACTCGTGCATGTCCAACCTCAAAGA
CGAAGAGTGTGGTGAAATGACAAGTGATGGGGCATATCAAATGCTTGGAG
GCACTAAGAACAGCCCTACGAGTGCGCCGGGCGTATGTAGCCGCTGGCAA
CACCCGGGGGCGGTTAATGATCGCGGTTTCTTCTTTTTTGTCGCAAAAGG
AATGGCCGTGCTTTTGATGTACTCTACAAGCACCGGGCTGCTTGTAAGGG
AGGGCAGATTTGCTTGCCAGCCGTTGTCGGTGGGCCGCCAAACTTCCTTT
CCCCAGTGTGTACTCGAACCACATACTTGGATGTGCTTCCAGAAGTATCC
TCCAAGTACCTTGCGACACACTCTGTGTTGGCCCACGCTGCTACCAAGGC
AGCAGACGGGGTACGGGTACTTCTTTGTGTGTTTCTCGATGCACTGGTTG
CGCTCGCCACCATCTGACATGGCGTGTGGTGTTCTCTCACGAGTCTTTCG
ATGCGCCTTTTGCCCGCGGCACCGAGGGCCCGGCCCCGTTCGGGTAAGTT
AGGGATCTTGCTTGGCTGTACTTGGCTTGCCGCTCCCCATGGCAGAAGGT
TTGGAACCCGGGCGGTGAGCTCATCTGTCTGGTTTACTTGCAAGTATATT
TACTACTTCGAAGTACGTATTATATACGAGTATATGTACTCATGTTGTGC
TGGCCATGGTCCCGAGACCGTTGACCACGCGCCGAAGTACGTGCAAAGAG
GTTCCCTCCCGACCTCTCCGCGCGGTTGCCGTGCCCTTCCCTGCCCGTGC
TCGGCGTGTGGTTACCACCATGCCTGCTTCAACGGCTGGTAACCATAACC
GCTGCCCCGCCCACCCGCCCCGCCTGCCTGCATGCGTGCGTGGCTGTCTG
CCTGCTGCCTGCCTGCCTGCTTGTGTGTGTCTGTGTGTGTATATGTGTGT
GTGTGTGTGCGTGCGTGCATGCGCGTGCACGGCTGCACGCGTGCAGCGTG
TGCCAGGTGTACCACGACCAGGCGGAAGGGGGAAGCGAACTGGACCCCAG
CCGGTGAGGAGGGCGGTGCGCGACCGAGAGCGGCAAGCGACGCCCACCAA
AGCCCATCGTCGAAAGTTACATACTTCTCAGTACTGTACTAGAGTAGTAG
AACAGAACGCTTGGGGAGCCCACAGAGAAGTGCGAAGCACTTGGAAGACC
GTAAGGGGTATTGAGAGCGCGCCGTTTCCCGACGTTTCCACACGGCAAGG
GGGGGGGCGCTCCGCTCCGGAGCCGGAACGGGCGTGGCACGCCGCCGGGC
ATGGGCTCCCCAGGGGGCACACAAGCCATACAGCCACCTCGGTTGGATGT
GAGTAGTGTACAGTACAGTACTGCACACTATACTGTGCAGGACATGCACA
TGATATGTGGTGGTGTCTGAGTTATGGTGATGATCCGGATGGCTGCGCAG
GTACAAGCTGCTGCGGTACGAGGACATGGTTCGTGAAGTGCTGGGCACCG
CCGATACCCTGCACCAATGGGTGGGCCTGGGGCCGGCCCCCCAAGAGGTG
CGCACGGAACACGGAAGGGCGTGCATAGCAGTGGGCTGTCGTGTGCGTGT
GTGTGCGCGTGTGTGTGCGTGCCTGCATACGTGCCGTTCGCGGTATCTGG
GTCTACAGTAATGTGTACTCACGTTGTGCTTGCCATAGTCCCGAGACCAT
TGACCACGCGCCATTTGACGACGTAGCAATCTCCCTCCCGCCCTGTATAT
GTATGTACTCACATTGTGCTTTCCGTGAGTAGTCCCGAGACCATGTATAT
ATATGTACTCACATTGTGCGTGCCGTACTCCCGAGACCATTGACCACGCG
CCTCGATCGAGACGGAGCAGGCCCCCTCCCTCCCCTGGCAGACCCAGGGT
TATACAGTACGAGGAAGTGCCTTGAAACGCATGTGCAGCCAAGCGCCCGA
TCTCGCAGCTACAACTTGTATGTGTCAGACAGTGTAGCAGTACACGTAGC
TGGCGTGCTTCTGAGCGCGACACTGGCGAGTCTCACTATGTGCAACTGTA
CAGTACTGCTGTACTGTACTGGACACGTACAGTGCAGGATATTCAAGAAG
TAGGATGTATGTACTCGAGTCGTGCTAGCCCAGCCCGGGCCAACTATGTA
GTCCCGTTTCATCTACAAGGTGCAAGGAAGGCATTTGTGGCTGGTAGCAG
CGATTTCCATATGCAACATCCTACAGTATGTCAGAGGCCCAAACACGCCC
AAACCTGAACGGGAAAAAGGGAAACTGGCCGGGGCCCAAACTGGTTTGGG
TTATTGCCAGTTCAATGGCGCTCGGCCGGTCGAAATCGGCGCCACTTCAC
AACTCAGCCGAAAACACAGTCCTCCTCCCACTTACTTGGAAAGTGCTGTA
CAGCACGGCATTGACTTGGGTTAGTGTCTCTAAGTTATCAAAGTACTGTA
CAGCACGGCATTGAACACAGGCACACTTGGGTTACTTATCTATCAACCCT
CCCCCGCCCCCTACGGCAAACCCCCCCCACCCCCCCGGGCCGGCCCGCGC
AGGTGGAGGAATGGGTGGACCAAAACACAAAGAAGGACAACTGCGCGGGG
GGAGGAAGATTGCCGGAGGGGAGGAGAGCCTTGCGCGAGATCAGTGACGG
TGACTCGCTCCAGACTGGGGCCATCACTGACACCAGCCCAAAGGGCCCCC
GAGGCGTCCAGGCGGCCGCCACACAGGGGCGACTGCCGGGCCCGGGGCTG
GCGGGCCTGGGGCCGGGCCCGGGGCCAGAG
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig1:7624825..7634054-

>mRNA_S-ischiensis_contig1.1121.1 ID=mRNA_S-ischiensis_contig1.1121.1|Name=mRNA_S-ischiensis_contig1.1121.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2328bp|location=Sequence derived from alignment at S-ischiensis_contig1:7624825..7634054- (Schizocladia ischiensis KU_0333)
ATGGTTGGCCCAACTATGAGATTATGCCGAGGACAAATGGTTTACATACA
AGGTAATTTAATGGTGGGGGGGCGTGTTTTGCCGCGAGACTACGCAGTTG
GTTGTTTTGTTCCTGCAGGGCGCCCGTGCAGTGCGATGGCGCGCCCCATG
CGCTGGGGCCGCCAGCTCATGCTGTGCTTGTTTTCATGCGGGAGGCTTAC
GTCCTCCTTTCTGGCGCAAGCCGACCCAAGCAGTCAGACGAATGCAATCC
GAGTCGTCATCCTTGCTCAAGGGAGGTCGGGAAGTACATTAACGGGGGAG
CTCTTCCGCCACAACCCTGGCGTCCTCTACTTTTACGAACCCTGCCGGGG
CATGGGGGTCGGCCTCAACGGTGCCAAGTGGAAGTTCCAGCAGTTGCGGG
GAGAGGCGTGCGTTGCACAGTCCCTGCGTTTCCTGACGTGCCAGTTCACG
GAACGCGACTCCGAGAGGGTTGGCGCGGACTACAACGCGGCCGACAGGGA
TGGTTGGCCCAACTATGAGATTATGCCGAGGACAAATGGTTTACATACAA
GGTAATTTAATGGTGGGGGGGCGTGTTTTGCCGCGAGACTACGCAGTTGG
TTGTTTTGTTCCTGCAGGGCGCCCGTGCAGTGCGATGGCGCGCCCCATGC
GCTGGGGCCGCCAGCTCATGCTGTGCTTGTTTTCATGCGGGAGGCTTACG
TCCTCCTTTCTGGCGCAAGCCGACCCAAGCAGTCAGACGAATGCAATCCG
AGTCGTCATCCTTGCTCAAGGGAGGTCGGGAAGTACATTAACGGGGGAGC
TCTTCCGCCACAACCCTGGCGTCCTCTACTTTTACGAACCCTGCCGGGGC
ATGGGGGTCGGCCTCAACGGTGCCAAGTGGAAGTTCCAGCAGTTGCGGGG
AGAGGCGTGCGTTGCACAGTCCCTGCGTTTCCTGACGTGCCAGTTCACGG
AACGCGACTCCGAGAGGGTTGGCGCGGACTACAACGCGGCCGACAGGGGC
TCACCGGAAGTGTTTGCCTTGGCGCGGGCCGTGAAGGCAAACAACCGGGA
AGCATTTCAGAGCGCGCACGCCGCACTTATGAACAAATGTCACACTAGCC
GGGCGGTGGTGATCAAGGAAATCAGGCTCACCGGAAGTGTTTGCCTTGGC
GCGGGCCGTGAAGGCAAACAACCGGGAAGCATTTCAGAGCGCGCACGCCG
CACTTATGAACAAATGTCACACTAGCCGGGCGGTGGTGATCAAGGAAATC
AGGTTCGCGGCCATCTACCCCTCGCTGAGGATGTCTCCGGGGCTAAAAAT
CGTTCACCTGGTTAGGGACCCCCGGGGGGTGGTGCATTCCCTGACCCGGA
CTTTTTTGGCCAGCAAGGGGAGGTCCGCTGTGTCGCATGCGGAGAAGGTT
GCCCGCGGGTTCGCGGCCATCTACCCCTCGCTGAGGATGTCTCCGGGGCT
AAAAATCGTTCACCTGGTTAGGGACCCCCGGGGGGTGGTGCATTCCCTGA
CCCGGACTTTTTTGGCCAGCAAGGGGAGGTCCGCTGTGTCGCATGCGGAG
AAGGTTGCCCGCGGCGTGTGCCAGGTGTACCACGACCAGGCGGAAGGGGG
AAGCGAACTGGACCCCAGCCGCGTGTGCCAGGTGTACCACGACCAGGCGG
AAGGGGGAAGCGAACTGGACCCCAGCCGGTACAAGCTGCTGCGGTACGAG
GACATGGTTCGTGAAGTGCTGGGCACCGCCGATACCCTGCACCAATGGGT
GGGCCTGGGGCCGGCCCCCCAAGAGGTACAAGCTGCTGCGGTACGAGGAC
ATGGTTCGTGAAGTGCTGGGCACCGCCGATACCCTGCACCAATGGGTGGG
CCTGGGGCCGGCCCCCCAAGAGGTGGAGGAATGGGTGGACCAAAACACAA
AGAAGGACAACTGCGCGGGGGGAGGAAGATTGCCGGAGGGGAGGAGAGCC
TTGCGCGAGATCAGTGACGGTGACTCGCTCCAGACTGGGGCCATCACTGA
CACCAGCCCAAAGGGCCCCCGAGGCGTCCAGGCGGCCGCCACACAGGGGC
GACTGCCGGGCCCGGGGCTGGCGGGCCTGGGGCCGGGCCCGGGGCCAGAG
GTGGAGGAATGGGTGGACCAAAACACAAAGAAGGACAACTGCGCGGGGGG
AGGAAGATTGCCGGAGGGGAGGAGAGCCTTGCGCGAGATCAGTGACGGTG
ACTCGCTCCAGACTGGGGCCATCACTGACACCAGCCCAAAGGGCCCCCGA
GGCGTCCAGGCGGCCGCCACACAGGGGCGACTGCCGGGCCCGGGGCTGGC
GGGCCTGGGGCCGGGCCCGGGGCCAGAG
back to top