prot_S-ischiensis_contig99.21180.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig99.21180.1
Unique Nameprot_S-ischiensis_contig99.21180.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length304
Homology
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BLAST of mRNA_S-ischiensis_contig99.21180.1 vs. uniprot
Match: F0WV79_9STRA (Uncharacterized protein AlNc14C290G10224 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WV79_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 8.650e-8
Identity = 46/152 (30.26%), Postives = 75/152 (49.34%), Query Frame = 0 
Query:   41 EAERLLDEMHSQVAPAGGSDGLLGFIQHAVSSRDDVSKEEHLAASIKRIFGIADDWRPSAPLQGNLRTPGRRQRGALSAAEGASGPDRDKSCPHFLSPRGRMQIAAGSRVCRTVDASYIGDPMLRPLESQEVQWLAKLLVELSLLLNRITGL 192
            +AERL D++ S             +++   +     +    L+  ++RIF I+D +  S     +  +P       + + E    P RD + PH L+ +G  ++  G R+C +  A+YIGDPMLRP+ S E+  L +LL  LS  L+ I GL
Sbjct:  584 DAERLYDKLVSDAR----------YMEKDTTEGLQETNITRLSGMLRRIFEISDAYVASVAQSKSSVSP-------IDSLE----PTRDATQPHRLTHQGIFELRNGLRLCSSDSATYIGDPMLRPIRSFEIPILVRLLYRLSSWLDGIFGL 714
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BLAST of mRNA_S-ischiensis_contig99.21180.1 vs. uniprot
Match: A0A024FZ76_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024FZ76_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 2.820e-6
Identity = 38/113 (33.63%), Postives = 58/113 (51.33%), Query Frame = 0 
Query:   80 EHLAASIKRIFGIADDWRPSAPLQGNLRTPGRRQRGALSAAEGASGPDRDKSCPHFLSPRGRMQIAAGSRVCRTVDASYIGDPMLRPLESQEVQWLAKLLVELSLLLNRITGL 192
            + L   ++ IF I D +  S     +  +P       + + E    P RD   PH L+ +G  ++  G R+C    A+YIGDP+LRP+ S E+  L +LL  +S+ LN I GL
Sbjct:  615 DRLCGMLRSIFEIPDAYVASVTQVKSSFSP-------IDSLE----PTRDVKQPHRLTRQGIFELKNGLRLCSPDTATYIGDPILRPIRSYEIPILVRLLYRISIWLNGIFGL 716
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig99.21180.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
F0WV79_9STRA8.650e-830.26Uncharacterized protein AlNc14C290G10224 n=1 Tax=A... [more]
A0A024FZ76_9STRA2.820e-633.63Uncharacterized protein n=2 Tax=Albugo candida Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024129Sphingomyelin phosphodiesterase 4PANTHERPTHR12988FAMILY NOT NAMEDcoord: 123..296
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..281
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 282..302
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 303..303
NoneNo IPR availableTMHMMTMhelixcoord: 282..299

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig99contigS-ischiensis_contig99:218455..222831 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig99.21180.1mRNA_S-ischiensis_contig99.21180.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig99 217613..224872 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig99.21180.1 ID=prot_S-ischiensis_contig99.21180.1|Name=mRNA_S-ischiensis_contig99.21180.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=304bp
MAHARPGAPLGMETALLARHQAALAPSQGPQLAFLGDYRGEAERLLDEMH
SQVAPAGGSDGLLGFIQHAVSSRDDVSKEEHLAASIKRIFGIADDWRPSA
PLQGNLRTPGRRQRGALSAAEGASGPDRDKSCPHFLSPRGRMQIAAGSRV
CRTVDASYIGDPMLRPLESQEVQWLAKLLVELSLLLNRITGLPRNKTSIA
AATGRARAHGQDDYYSAGDERDPSMAGGCGGGGWEYDEDRSDEGPSAAIR
LGRSWEAGQASGSLRDTWRFNLRGLANWRHDFAWFVVSLSMYGLWLLLTR
AFS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024129Sphingomy_SMPD4