prot_S-ischiensis_contig97.21131.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-ischiensis_contig97.21131.1
Unique Name	prot_S-ischiensis_contig97.21131.1
Type	polypeptide
Organism	Schizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length	398

Homology

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BLAST of mRNA_S-ischiensis_contig97.21131.1 vs. uniprot
Match: A0A310S5G3_9HYME (Vitellogenin receptor n=2 Tax=Eufriesea mexicana TaxID=516756 RepID=A0A310S5G3_9HYME)

HSP 1 Score: 58.9 bits (141), Expect = 1.300e-5
Identity = 46/166 (27.71%), Postives = 79/166 (47.59%), Query Frame = 0

Query:  109 YVMAHGESEMAKVTITHLEDSTDSMVPVMTNMPSPKDVMLTQKGTKLTYTDLSDAIVGRVNLDGSGNEILVAGTTN-PAVLAVDKVTGRLYWTAPLDDEETSYVIRTSDADGNDAQVLLHLDNQ---SKGLHHTNGQLYWTEYDTSVLRRCTLCDGTDTENLIEGL 270
            YV      +  +V I  LED T+  + V T + SP D+ +      + +TD     +G  + DGS   +++    N P  LA+   +G LYWT    +  ++  I  +  DG +A  L++ D +   S  + +TN +LYW +    V+    L DGTD   +++ +
Sbjct:  319 YVYWSDVEDEDEVIIRSLEDGTERNIIVTTGLSSPDDIAVDWVTGNIYFTDSGYMHLGVCSNDGSYCTVIIKERNNKPRGLALLPSSGLLYWT----EWGSNSSILMASMDGKNATALINQDLEWPNSLSIDYTNNRLYWIDSKLKVIESIRL-DGTDRRTILKDI 479

The following BLAST results are available for this feature:

BLAST of mRNA_S-ischiensis_contig97.21131.1 vs. uniprot

BLAST of mRNA_S-ischiensis_contig97.21131.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A310S5G3_9HYME	1.300e-5	27.71	Vitellogenin receptor n=2 Tax=Eufriesea mexicana T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011042	Six-bladed beta-propeller, TolB-like	GENE3D	2.120.10.30		coord: 105..299 e-value: 2.8E-18 score: 68.1
None	No IPR available	PANTHER	PTHR46513:SF13	LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN	coord: 129..332
None	No IPR available	PANTHER	PTHR46513	FAMILY NOT NAMED	coord: 129..332
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 44..62
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..43
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 63..397
None	No IPR available	SUPERFAMILY	63825	YWTD domain	coord: 129..277

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-ischiensis_contig97	contig	S-ischiensis_contig97:214312..217832 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Schizocladia ischiensis KU_0333	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-ischiensis_contig97.21131.1	mRNA_S-ischiensis_contig97.21131.1	Schizocladia ischiensis KU_0333	mRNA	S-ischiensis_contig97 214196..218013 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-ischiensis_contig97.21131.1 ID=prot_S-ischiensis_contig97.21131.1|Name=mRNA_S-ischiensis_contig97.21131.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=398bp
MGRGKSRTYGSLQATEEAAPFAYDSEESETIAYGEPPIPQGRRWAPLAMV
GAAAVMFAAAAWRGTSKQASAAPRVQDVTGFRAAASPVVSPGVSTASGGR
ALAAPMEMYVMAHGESEMAKVTITHLEDSTDSMVPVMTNMPSPKDVMLTQ
KGTKLTYTDLSDAIVGRVNLDGSGNEILVAGTTNPAVLAVDKVTGRLYWT
APLDDEETSYVIRTSDADGNDAQVLLHLDNQSKGLHHTNGQLYWTEYDTS
VLRRCTLCDGTDTENLIEGLDLPMCECLHVCVHVCVWGCMREGACCVCVW
AGVRGCVRMRARAHVCVQTVCVHCGCACVCKYVSKNVCVHAGYAGDMCVR
THGRVCVCAHARVSTAPLPPHHRTQRPLPSTTNTREVTYGLLRVMLL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011042	6-blade_b-propeller_TolB-like