prot_S-ischiensis_contig95.21043.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig95.21043.1
Unique Nameprot_S-ischiensis_contig95.21043.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length254
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig95.21043.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 205..229
e-value: 2.5E-6
score: 37.0
IPR001876Zinc finger, RanBP2-typePFAMPF00641zf-RanBPcoord: 205..230
e-value: 4.9E-8
score: 32.2
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 207..226
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 198..232
score: 8.931
IPR003903Ubiquitin interacting motifSMARTSM00726uimcoord: 128..147
e-value: 49.0
score: 11.4
coord: 170..189
e-value: 2.5
score: 17.1
IPR003903Ubiquitin interacting motifPROSITEPS50330UIMcoord: 170..189
score: 8.999
NoneNo IPR availableGENE3D2.20.28.140coord: 201..245
e-value: 1.8E-9
score: 39.2
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 203..230

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig95contigS-ischiensis_contig95:103455..106957 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig95.21043.1mRNA_S-ischiensis_contig95.21043.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig95 103455..106957 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig95.21043.1 ID=prot_S-ischiensis_contig95.21043.1|Name=mRNA_S-ischiensis_contig95.21043.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=254bp
GGGTKRRFGTPLQDISSTNTYANSAPSERRRAFAAQRSTEKKQRTGQPLL
ERWDAQTDRDLKGGADYLKAITRRDPPDSKHAACPRVYGSRGGAAAAAAA
ARGQTLASWKLSVESSQEHSDAAAVDTEEASQLQIALKESMAETSARGMG
VEVGGGGGGMAGGGAGAFGDEDPELEEALRQSLEEHGGQLEVVDHDARTG
ARGQRQWACPDCTYDNPASAPACEMCGGARGPKAVVAEEPKRWTAGVAAA
GTLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR003903UIM_dom
IPR036443Znf_RanBP2_sf