prot_S-ischiensis_contig92.20951.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig92.20951.1
Unique Nameprot_S-ischiensis_contig92.20951.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length289
Homology
BLAST of mRNA_S-ischiensis_contig92.20951.1 vs. uniprot
Match: D7FZH1_ECTSI (Tic22-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH1_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 3.500e-64
Identity = 122/285 (42.81%), Postives = 181/285 (63.51%), Query Frame = 0
Query:   18 RSVLQGVVSFAAFTFGAPA-------AQQAARNHLGVDNFVTRSAA---AEASIVKKFSKRTLGEKLSNVPVFMVVNHEGAPYLTPSPDGS-QLGVIFTNLEDANSQCQEMLQLQFYEDDARLLVISLDKAFQMVKEGPRATGGTNEKGMQEVMTFKLNEDDGTREKAARMGVSRTQLD-EVDIPVFYAEGLIVKKSRDNVKALFLDMEDLAKAWNKARKADPNMPRKPKIKVFDLVEVILQMEESDDYKSFGFFPSSKSVDYVKAARDVKGH--RTRLTRMREF 288
            RS+ +G  S A FT GA A        Q    +  G    V+  AA   AEAS+++ F KRT+ EKL+N+P FMV N +G+PYL+P+  G  Q+ V FTN++DA     EM+Q   Y+++AR+LV+S++KA+ MVK GP+ TG  N++G+ E M FKL  D  + +KA R+G+  +     +D+PVFY EGL VK+    VK LF+D  DL +AW KA  ++P+MP +P +KVF++ +VI+ ME +D++  FGFF S++  +++K ARD +    + RL RM  F
Sbjct:  105 RSLARGAASLATFTVGATALSGMSADVQHRLNSRDGAAVVVSIPAAMESAEASVLRPFEKRTVEEKLANLPAFMVTNKKGSPYLSPTEPGEPQMAVFFTNVDDAKEMLMEMVQESTYQNEARILVVSMEKAYGMVKAGPKLTGYQNDEGVDERMDFKLEPDMHSFQKARRLGLDVSPAAANIDVPVFYVEGLEVKRDGGLVKPLFMDPADLVEAWKKAAASNPDMPAEPTVKVFNMPDVIVAMELTDEFNQFGFFASTEGAEFIKQARDARKPFPKPRLGRMWAF 389          
BLAST of mRNA_S-ischiensis_contig92.20951.1 vs. uniprot
Match: A0A835Z8Y7_9STRA (Tic22-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Y7_9STRA)

HSP 1 Score: 193 bits (491), Expect = 8.090e-57
Identity = 120/275 (43.64%), Postives = 155/275 (56.36%), Query Frame = 0
Query:   11 ERRRRLMRSVLQGVVSFAAFTFGAPAAQQAARNHLGVDNFVTRSA---AAEASIVKKFSKRTLGEKLSNVPVFMVVNHEGAPYLTPSPDGSQLGVIFTNLEDANSQCQEMLQLQFYEDDARLLVISLDKAFQMVKEGPRATGGTNEKGMQEVMTFKLNEDDGTREKAARMGVSRTQLDEVDIPVFYAEGLIVKKSRDNVKALFLDMEDLAKAWNKARKADPNMPRKPKIKVFDLVEVILQME-ESDDYKSFGFFPSSKSVDYVKAARDVKGHRTR 281
            +RR RL + + Q    FA  T GAPA  Q  R+       V       +AEAS+ KKF++RTL EKL+NVP F +VN  G  YL     G Q G+ FT+ EDAN    EMLQ      DAR+L+I LDKAF M+K  PRATG  N+ G  E + F+ +E    REK     V   Q     +PVFYA GL + K    VK +F D+++L  AW KA K DPNMPR P I+V++L E++L ME +   +  FGF P+  SV+ +K  R   G R R
Sbjct:   13 QRRLRLKKRLAQVAAGFAVATAGAPALSQGIRSGHSTSGQVLSEVLMPSAEASVFKKFNQRTLKEKLANVPAFAIVNRGGNFYLNIKETGGQQGMFFTSFEDANDMLFEMLQSPGLNGDARILIIPLDKAFDMIKH-PRATGMVNDMGQPETIEFRFHEAVHPREKMELYRVQDKQ--GAAVPVFYAGGLTIVKEGVKVKPVFFDVKELLDAWFKAAKTDPNMPRVPDIQVYNLPELLLLMESDPTKHTDFGFVPAGSSVEAIKEVRGQHGTRAR 284          
BLAST of mRNA_S-ischiensis_contig92.20951.1 vs. uniprot
Match: A0A0G4ED78_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ED78_VITBC)

HSP 1 Score: 151 bits (381), Expect = 1.920e-40
Identity = 92/228 (40.35%), Postives = 136/228 (59.65%), Query Frame = 0
Query:   63 KKFSKRTLGEKLSNVPVFMVVNHEGAPYLTPSPDGSQLGVIFTNLEDANSQCQEMLQLQFYEDDARLLVISLDKAFQMVKEG-PRATGGTNEKGMQEVMTFKLN--EDDGTREKAARMGVSRTQLDEVDIPVFYAEGLIVKKSRDNVKALFLDMEDLAKAWNKARKADPNMPRKPKIKVFDLVEVILQME-ESDDYKSFGFFPSSKSVDYVKAARDVKGHRTRLTRMR 286
            KKFS R + E+LS+VPVF++ N    PYLT    G Q  ++FT+ E+AN+   EM+Q      DARL VISL+KA+   +   PR TG   E G + VMTFK +  + +        +G  RT++    IPVF A GL V K+ D +  LF+D+EDL  AW +  +A P+ P KPK+ V++L++V+L  E +++    +G  PSSK++D+VK  R     + R+ R+R
Sbjct:   66 KKFSSRPMDERLSSVPVFLITNSYALPYLTQVRPGEQTALMFTDPEEANTMLNEMVQTAGPGADARLFVISLEKAWAYARRAEPRRTGIVGEDGKEAVMTFKFHPPQVENAGNYVTLLG-RRTKM----IPVFEATGLDVTKNGDKLCPLFMDLEDLEAAWERMHRARPDTPPKPKVSVYNLLDVLLHRERQANGLGPWGIVPSSKALDFVKKNRSGGTRKARMIRIR 288          
BLAST of mRNA_S-ischiensis_contig92.20951.1 vs. uniprot
Match: M1URJ3_CYAM1 (Similar to chloroplast inner membrane protein Tic22 n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1URJ3_CYAM1)

HSP 1 Score: 142 bits (357), Expect = 3.490e-36
Identity = 82/229 (35.81%), Postives = 134/229 (58.52%), Query Frame = 0
Query:   64 KFSKRTLGEKLSNVPVFMVVNHEGAPYLTPSPDGSQLGVIFTNLEDANSQCQEMLQLQFYE-DDARLLVISLDKAFQMVKEGPRATGGTNEKGMQEVMTFKLNEDDGTREKAARMGVSRTQLDEVDIPVFYAEGLIVKKSRDNVKALFLDMEDLAKAWNKARKADPNMPRKPKIKVFDLVEVILQMEES------------DDYKSFGFFPSSKSVDYVK--AARDVKG 277
            ++S++TL EKL+ VPVF V N  G P+L     G Q+G+IF + +DA    +++ +    E +DAR+ ++ LD+AF+MVK  P+ +G    +G +  M F+   +    E A  +     Q     +P F A+GL ++K ++ V  +FLD  DL +AWN+ R+    +P++P+I+V DL+EVIL++EE+             D +   FFPSSKSV+++K  +A+  KG
Sbjct:  126 RYSRKTLSEKLAQVPVFAVTNESGQPFLAAMERGLQVGLIFFDPDDAIKMLEDLKRSSGKEAEDARIFIMGLDRAFEMVKSKPQPSGLRGPRGDELKMVFRFYPNQQQLEYARTVAKKTKQPTVRGVPCFVAKGLTLRKGKEFVIPIFLDKRDLDEAWNRLRQELAELPKQPEIEVGDLIEVILRLEEAAKNPKSLNETELQDLRRVAFFPSSKSVEFMKRESAKQFKG 354          
BLAST of mRNA_S-ischiensis_contig92.20951.1 vs. uniprot
Match: A0A7J7IP27_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IP27_9RHOD)

HSP 1 Score: 136 bits (342), Expect = 6.230e-34
Identity = 78/220 (35.45%), Postives = 128/220 (58.18%), Query Frame = 0
Query:   64 KFSKRTLGEKLSNVPVFMVVNHEGAPYLTPSPDGSQLGVIFTNLEDANSQCQEMLQLQFYE-DDARLLVISLDKAFQMVKEGPRATGGTNEKGMQEVMTFKLNEDDGTREKAARMGVSRTQLDEVDIPVFYAEGLIVKKSRDNVKALFLDMEDLAKAWNKARKADPNMPRKPKIKVFDLVEVILQMEES------------DDYKSFGFFPSSKSVDYVK 270
            ++S++TL EKL+ VPVF V N  G P+L     G+Q+G+IF +  DA    +++ +    E +DAR+ V+ LD+AF+MVK  P+ +G    +G +  M F+   +    E A  +     Q     +P F A+GL ++K ++ V  +FLD  DL  AW++ R+   ++P+ P+++V DL+EVIL++EE+             D +   FFPSSKSV+++K
Sbjct:  134 RYSRKTLDEKLAQVPVFAVTNESGQPFLAAMERGTQVGLIFFDPSDAMKMLEDLKRSSGKEAEDARIFVMGLDRAFEMVKSKPQPSGLRGPRGDELKMVFRFYPNQQQVEHARSLARKTKQPLVRGVPCFVAKGLTLRKGKEFVIPVFLDKRDLEDAWSRLRQDMSDLPKHPEVEVGDLIEVILRLEEAAKNPKSLDEKELQDIRRVAFFPSSKSVEFMK 353          
BLAST of mRNA_S-ischiensis_contig92.20951.1 vs. uniprot
Match: R7QF31_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF31_CHOCR)

HSP 1 Score: 128 bits (321), Expect = 5.400e-32
Identity = 84/220 (38.18%), Postives = 124/220 (56.36%), Query Frame = 0
Query:   56 AAEASIVKKFSKRTLGEKLSNVPVFMVVNHEGAPYLTPSP-DGSQLGVIFTNLEDANSQCQEMLQLQFYEDDARLLVISLDKAFQMVKEGPRATGGTNEKGMQEVMTFKLNEDDGTREKAARMGVSRT---QLDEVDIPVFYAEGLIVKKSRDNVKALFLDMEDLAKAWNKARKADPNMPRKPKIKVFDLVEVILQMEESDD--YKSFGFFPSSKSVDYV 269
            AA A    KFSK+T+ EKLS VPVF V N  G PYL      GSQ+G+IF +  DA +  ++M +      DAR+ ++ LDKA++MVK  P+ +G     G +  M F+   D  +++  A  G+ R    +     IPVF A+GL ++K  +NV  LFL  EDL  AW+K R ++ ++P    + V +L+ +I QME   +   ++ GFF    SV+YV
Sbjct:   13 AAPAFAAAKFSKKTVSEKLSQVPVFAVTNASGQPYLANMDGSGSQIGLIFFSHHDALNMLKDMKKNPG-ASDARVYIMGLDKAYEMVKAKPQPSGIRGAAGEELTMVFRFFPD--SKQVKAAEGLQRKLRRRRGVEGIPVFVAKGLTLRKGSENVVPLFLTKEDLDSAWSKLRDSNKDLPNNASVVVGNLLYIIQQMESDGEPELRNLGFFAPKASVEYV 229          
BLAST of mRNA_S-ischiensis_contig92.20951.1 vs. uniprot
Match: F2HH75_9CRYP (Translocator of the inner chloroplast membrane n=1 Tax=Cryptomonas paramecium TaxID=2898 RepID=F2HH75_9CRYP)

HSP 1 Score: 124 bits (312), Expect = 3.560e-30
Identity = 73/210 (34.76%), Postives = 117/210 (55.71%), Query Frame = 0
Query:   64 KFSKRTLGEKLSNVPVFMVVNHEGAPYLTPSPDGSQLGVIFTNLEDANSQCQEMLQLQFYEDDARLLVISLDKAFQMVKEGPRATGGTNEKGMQEVMTFKLNEDDGTREKAARMGVSRTQLDEV--DIPVFYAEGLIVKKSRDNVKALFLDMEDLAKAWNKARKADPNMPRKPKIKVFDLVEVILQMEESDD-YKSFGFFPSSKSVDYVK 270
            +FS +   +KLS +PVF + N  G PYLT  P+  Q+G+IF + EDA +    M        DAR+ ++ LD+A++MV         T  +  Q+  T      D  + K A + V++    +   DIPVF A+GL+VKK +D++  +F   EDL K W K    +P++  KP + V DL++++  ME  +  +  FGFFPS K+++++K
Sbjct:   85 RFSSKNYYQKLSQIPVFAITNSSGQPYLTTGPEKEQIGLIFFSHEDALALLTAMKNTH-QVSDARIYIMGLDRAYRMV-----TADKTKNQLNQDFKTIFRFYPDQKQVKNASLIVNKLNFYKTIRDIPVFVADGLVVKKGKDSMTPVFFSKEDLEKTWKKMISENPDINVKPTVLVVDLLKILKAMENDEKIFSKFGFFPSQKNIEFIK 288          
BLAST of mRNA_S-ischiensis_contig92.20951.1 vs. uniprot
Match: J7G7I2_9CRYP (Translocator of the inner chloroplast membrane n=1 Tax=Chroomonas mesostigmatica CCMP1168 TaxID=1195612 RepID=J7G7I2_9CRYP)

HSP 1 Score: 124 bits (310), Expect = 1.180e-29
Identity = 80/232 (34.48%), Postives = 123/232 (53.02%), Query Frame = 0
Query:   65 FSKRTLGEKLSNVPVFMVVNHEGAPYLTPSPDGSQLGVIFTNLEDANSQCQEMLQLQFYEDDARLLVISLDKAFQMVKEGPRATGGTNEKGMQEVMTFKLNEDDGTREKAARMGVSRTQLDEVD-IPVFYAEGLIVKKSRDNVKALFLDMEDLAKAWNKARKADPNMPRKPKIKVFDLVEVILQM-------EESDDYKSFGFFPSSKSVDYVKAARDVKGHRTRLTRMREF 288
            FS++    KL ++PVF V N  GAP+L  +  G Q+G+IF +  +A    +EML+         + +++L+KAF+MV  GP  +G  +  GM   M F+   +      A R+   R   +++  IPVF  +GL + K ++ +  +F   EDL   WNK RK DP++ +KP+I   D +++ L M       E    Y +FGF PSSK+ D+VK    + G    L RM EF
Sbjct:   97 FSEQPPLAKLKSIPVFSVTNRTGAPFLIQNKKGEQVGLIFFSYREAIDFSKEMLKAH-QAKKPYIYIMNLEKAFKMVNLGPTLSGLKDNYGMDHKMRFQFVPEKKQLNYATRLAKKRGITEKIPLIPVFTVDGLTLNKGKEKISPIFFAKEDLISVWNKVRKNDPSLHKKPQIIEGDFIQLFLFMKADYKNEENFQKYFNFGFVPSSKNKDFVKI-ESINGP---LARMVEF 323          
BLAST of mRNA_S-ischiensis_contig92.20951.1 vs. uniprot
Match: A0A6H5L2U4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2U4_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 5.770e-27
Identity = 64/154 (41.56%), Postives = 94/154 (61.04%), Query Frame = 0
Query:  138 FQMVKEGPRATGGTNEKGMQEVMTFKLNEDDGTREKAARMGVSRTQLD-EVDIPVFYAEGLIVKKSRDNVKALFLDMEDLAKAWNKARKADPNMPRKPKIKVFDLVEVILQMEESDDYKSFGFFPSSKSVDYVKAARDVKGH--RTRLTRMREF 288
            F  V    R     N+ G+ E+M FKL  D  + +KA R+G+  +      DIPVFYAEGL VK+    VK LF+D  DL +AW KA  ++P+MP +P +KVF++ +VI+ ME +D++  FGFF S++  +++K ARD +    + RL RM  F
Sbjct:    9 FLTVSTPARTPRYQNDDGVDEMMDFKLEPDMHSFQKARRLGLDVSPAAANTDIPVFYAEGLEVKRDGGLVKPLFMDPADLVEAWKKATASNPDMPAEPTVKVFNMPDVIVAMELTDEFNQFGFFASTEGAEFIKQARDARRPFPKPRLGRMWAF 162          
BLAST of mRNA_S-ischiensis_contig92.20951.1 vs. uniprot
Match: A0A6H5L2Q1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2Q1_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 3.560e-26
Identity = 65/149 (43.62%), Postives = 92/149 (61.74%), Query Frame = 0
Query:   12 RRRRLMRSVLQGVVSFAAFTFGAPA-------AQQAARNHLGVDNFVTRSAA---AEASIVKKFSKRTLGEKLSNVPVFMVVNHEGAPYLTPSPDGS-QLGVIFTNLEDANSQCQEMLQLQFYEDDARLLVISLDKAFQMVKEGPRATG 149
            R  R  RS+ +G  S A FT GA A        Q    +  G    V+  AA   AEAS+++ F KRT+ EKL+N+P FMV N +G+PYL+P+  G  Q+ V FTN++DA     EM+Q   Y+++AR+LV+S++KA+ MVK GP+ TG
Sbjct:   99 RWARARRSLARGAASLATFTVGATALSGMSADVQHRLNSRDGAAVVVSIPAAMESAEASVLRPFEKRTVEEKLANLPAFMVTNKKGSPYLSPTKPGEPQMAVFFTNVDDAKEMLMEMVQESTYQNEARILVVSMEKAYGMVKAGPKLTG 247          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig92.20951.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D7FZH1_ECTSI3.500e-6442.81Tic22-like n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A835Z8Y7_9STRA8.090e-5743.64Tic22-like protein n=1 Tax=Tribonema minus TaxID=3... [more]
A0A0G4ED78_VITBC1.920e-4040.35Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
M1URJ3_CYAM13.490e-3635.81Similar to chloroplast inner membrane protein Tic2... [more]
A0A7J7IP27_9RHOD6.230e-3435.45Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
R7QF31_CHOCR5.400e-3238.18Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
F2HH75_9CRYP3.560e-3034.76Translocator of the inner chloroplast membrane n=1... [more]
J7G7I2_9CRYP1.180e-2934.48Translocator of the inner chloroplast membrane n=1... [more]
A0A6H5L2U4_9PHAE5.770e-2741.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L2Q1_9PHAE3.560e-2643.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007378Tic22-likePFAMPF04278Tic22coord: 41..252
e-value: 4.5E-18
score: 65.5
IPR007378Tic22-likePANTHERPTHR33926FAMILY NOT NAMEDcoord: 49..286
NoneNo IPR availableGENE3D3.40.1350.100coord: 65..274
e-value: 7.8E-39
score: 135.2
NoneNo IPR availablePANTHERPTHR33926:SF5coord: 49..286
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..288
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 33..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 20..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig92contigS-ischiensis_contig92:407373..415816 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig92.20951.1mRNA_S-ischiensis_contig92.20951.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig92 407337..416442 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig92.20951.1 ID=prot_S-ischiensis_contig92.20951.1|Name=mRNA_S-ischiensis_contig92.20951.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=289bp
MPVNPNPSMEERRRRLMRSVLQGVVSFAAFTFGAPAAQQAARNHLGVDNF
VTRSAAAEASIVKKFSKRTLGEKLSNVPVFMVVNHEGAPYLTPSPDGSQL
GVIFTNLEDANSQCQEMLQLQFYEDDARLLVISLDKAFQMVKEGPRATGG
TNEKGMQEVMTFKLNEDDGTREKAARMGVSRTQLDEVDIPVFYAEGLIVK
KSRDNVKALFLDMEDLAKAWNKARKADPNMPRKPKIKVFDLVEVILQMEE
SDDYKSFGFFPSSKSVDYVKAARDVKGHRTRLTRMREF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007378Tic22-like