prot_S-ischiensis_contig92.20945.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig92.20945.1
Unique Nameprot_S-ischiensis_contig92.20945.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length213
Homology
BLAST of mRNA_S-ischiensis_contig92.20945.1 vs. uniprot
Match: A0A2S6QBQ0_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6QBQ0_9PROT)

HSP 1 Score: 87.0 bits (214), Expect = 2.970e-16
Identity = 61/190 (32.11%), Postives = 97/190 (51.05%), Query Frame = 0
Query:    5 LSKLGIKSVSGLLWHLPVDVIDRRRCGNVDDAIEGEVLTIVLQLKKLVPAKGDG-PNKVECQDANGTAIGLVFWGGHKNWTWQTIRSSFVKGQARVVSGVARYNTFLDRWEISGPDVVAPLEQLSDVLSVEARYKLTTGLGQRKLRGTLRSALDTA---LQALDDVLDKNAFQGQGEEESVFRRRPLSRR 190
            + +L   ++  LLWHLPV +IDRR    +  A  G + T+ + + K  PA     P +V C D +G  + LVF+ G +++    ++S   +G+ RVVSG  R   + D  +I+ PD + PL +++ + +VE  Y +T+GL  + L   + SAL  A    +  D    K    G  +E      RPLS R
Sbjct:   27 ICQLAGPNIVDLLWHLPVSIIDRRYSPIISQATVGSIATLTIIVDKHEPAPRRALPYRVRCHDESGF-LNLVFFNGREDY----LKSILPEGETRVVSG--RVEQYRDEIQITHPDRIGPLHEITSIKTVEPVYPMTSGLTLKPLGRAISSALAMAPDLTEWQDTAWLKQQGWGSWQESLNSAHRPLSDR 209          
BLAST of mRNA_S-ischiensis_contig92.20945.1 vs. uniprot
Match: A0A2D6K0L1_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Micavibrio sp. TaxID=2024841 RepID=A0A2D6K0L1_9PROT)

HSP 1 Score: 83.6 bits (205), Expect = 4.650e-15
Identity = 55/150 (36.67%), Postives = 81/150 (54.00%), Query Frame = 0
Query:    8 LGIKSVSGLLWHLPVDVIDRRRCGNVDDAIEGEVLTIVLQLKKLVP-AKGDGPNKVECQDANGTAIGLVFWGGHKNWTWQTIRSSFVKGQARVVSGVARYNTFLDRWEISGPDVVAPLEQLSDVLSVEARYKLTTGLGQRKLRGTLRSAL 156
            LG + V  LLWH P+DVIDRR   N+++A  G V T+ +++ K  P A+   P +V+C D  G  + L F+  +K W    I     +G+ RVVSG   Y  +    +I  PDVV+P E+   + +VE  Y LT G+  + +R     AL
Sbjct:   32 LGGQKVLDLLWHFPIDVIDRRFSPNINEAPNGRVATMEVRVIKHFPNARRSQPYRVKCSDNTGE-LNLTFFRANKGW----IEKLLPEGERRVVSGKVEY--YQGNPQIVHPDVVSP-EERESLQTVEPIYPLTAGITNKVVRKAAIGAL 173          
BLAST of mRNA_S-ischiensis_contig92.20945.1 vs. uniprot
Match: A0A2D5Y0Q9_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Micavibrio sp. TaxID=2024841 RepID=A0A2D5Y0Q9_9PROT)

HSP 1 Score: 79.7 bits (195), Expect = 9.850e-14
Identity = 52/154 (33.77%), Postives = 84/154 (54.55%), Query Frame = 0
Query:    8 LGIKSVSGLLWHLPVDVIDRRRCGNVDDAIEGEVLTIVLQLKKLVP-AKGDGPNKVECQDANGTAIGLVFWGGHKNWTWQTIRSSFVKGQARVVSGVARYNTFLDRWEISGPDVVAPLEQLSDVLSVEARYKLTTGLGQRKLRGTLRSALDTAL 160
            LG   V  LL+HLP+D IDRR    + DA  G + T+ + + K  P A+   P +V+C D  GT + + F+  +K+W    I+    +G  R++SG   Y  +  + ++  PD+ AP E+ + + +VE  Y LT G+  +    TLR A+D A+
Sbjct:   33 LGGPKVLDLLFHLPIDFIDRRFSPKIKDAPNGRIATMEITVGKHFPNARRSAPYRVQCSDETGT-LNVTFFHANKDW----IKKQLPEGAQRIISGKVEY--YQGQAQMVHPDI-APPEERASLEAVEPVYPLTQGVTNK----TLRKAMDGAI 174          
BLAST of mRNA_S-ischiensis_contig92.20945.1 vs. uniprot
Match: G2KQK1_MICAA (ATP-dependent DNA helicase RecG n=2 Tax=Micavibrio aeruginosavorus TaxID=349221 RepID=G2KQK1_MICAA)

HSP 1 Score: 79.3 bits (194), Expect = 1.340e-13
Identity = 53/173 (30.64%), Postives = 89/173 (51.45%), Query Frame = 0
Query:    5 LSKL-GIKSVSGLLWHLPVDVIDRRRCGNVDDAIEGEVLTIVLQLKKLVP-AKGDGPNKVECQDANGTAIGLVFWGGHKNWTWQTIRSSFVKGQARVVSGVARYNTFLDRWEISGPDVVAPLEQLSDVLSVEARYKLTTGLGQRKLRGTLRSALDTALQALDDVLDKNAFQGQ 175
            L KL G   +  LLWH P+D IDRR    + +A+ G+  T+ L+++K +P  + + P +V C+D  G+ I LVF+  HK++    I  +   G   + SG  +   +  + ++  PD +  LE    + ++E  Y LT G+  + +R  + SAL  A+  L +  D   F  Q
Sbjct:   44 LEKLVGGPKILDLLWHKPIDFIDRRYAPTLAEALPGKTATLTLRVEKHIPNTRRNLPYRVRCKDDTGS-IDLVFFNAHKDY----IEKNMPLGATIIASG--KVEAYQGQLQMVHPDALGALEDKDSIATIEPIYALTAGVTNKAVRKAINSALP-AVPCLPEWQDAAYFARQ 208          
BLAST of mRNA_S-ischiensis_contig92.20945.1 vs. uniprot
Match: A0A7C7WUE7_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Micavibrio sp. TaxID=2024841 RepID=A0A7C7WUE7_9PROT)

HSP 1 Score: 78.2 bits (191), Expect = 3.350e-13
Identity = 54/162 (33.33%), Postives = 81/162 (50.00%), Query Frame = 0
Query:    8 LGIKSVSGLLWHLPVDVIDRRRCGNVDDAIEGEVLTIVLQLKKL-VPAKGDGPNKVECQDANGTAIGLVFWGGHKNWTWQTIRSSFVKGQARVVSGVARYNTFLDRWEISGPDVVAPLEQLSDVLSVEARYKLTTGLGQRKLRGTLRSALDTALQALDDVLD 168
            +G   +  +LWH P+D IDRR   +V DA  G++ T+ + + K  VP K   P +V C D  G  I LVF+  +K+W    +      G   VVSG   Y  +  + +I  PD +  +E    + +VE  Y LT G+  + LR  + +AL   L  L + LD
Sbjct:   45 VGGDKILDVLWHKPIDFIDRRFTPSVKDAPNGQICTLTITVDKHNVPPKRSMPYRVLCHDDTGP-IDLVFFNANKDW----VSKQLPLGAEVVVSGKVEY--YRGKPQIVHPDAIGSVEDRKSIETVEPIYPLTQGITNKLLRKAVLAALPR-LPELPEWLD 198          
BLAST of mRNA_S-ischiensis_contig92.20945.1 vs. uniprot
Match: A0A1Z8P3T3_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Rhodospirillaceae bacterium TMED23 TaxID=1986864 RepID=A0A1Z8P3T3_9PROT)

HSP 1 Score: 77.0 bits (188), Expect = 8.310e-13
Identity = 48/160 (30.00%), Postives = 90/160 (56.25%), Query Frame = 0
Query:   12 SVSGLLWHLPVDVIDRRRCGNVDDAIEGEVLTIVLQLKK-LVPAKGDGPNKVECQDANGTAIGLVFWGGHKNWTWQTIRSSFVKGQARVVSGVARYNTFLDRWEISGPDVVAPLEQLSDVLSVEARYKLTTGLGQRKLRGTLRSALDTALQALDDVLDKN 170
            ++  L WHLP ++IDRRR   + D  EG ++T+++ +K+ + P     P+KV C D     I L+F+    ++  + +      G+ RV+SG  + + +  + +++ PD +  L+  +D+  VE  Y LT GL  + L  T++ AL +A + L++ +DK+
Sbjct:   35 NIVNLFWHLPTNIIDRRRMPKICDTEEGSIVTLIVTIKQHITPRVRRLPHKVICFDET-NEITLIFFNNKADYLLKLLPI----GETRVISG--KIDNYDAQKQMTHPDHIGSLKDKNDIAKVEPIYPLTHGLSGKILAKTIKQALVSAPK-LNEWIDKD 186          
BLAST of mRNA_S-ischiensis_contig92.20945.1 vs. uniprot
Match: A0A4P6FSY8_9SPHN (ATP-dependent DNA helicase RecG n=2 Tax=Sphingomonadales TaxID=204457 RepID=A0A4P6FSY8_9SPHN)

HSP 1 Score: 76.3 bits (186), Expect = 1.520e-12
Identity = 53/172 (30.81%), Postives = 86/172 (50.00%), Query Frame = 0
Query:    5 LSKLGIKSVSGLLWHLPVDVIDRRRCGNVDDAIEGEVLTIVLQLKKLVPAKGDGPNKVECQDANGTAIGLVFWGGHKNWTWQTIRSSFVKGQARVVSGVARYNTFLDRWEISGPDVVAPLEQLSDVLSVEARYKLTTGLGQRKLRGTLRSALDTALQALDDVLDKNAFQGQG 176
            L +LG+  V  +L+HLPV+ IDR++   +D A  G V+T+ +       + G GP +V  +D  G  + L ++  +  W     R     G+ARVVSG  R +++    ++  PD   P E+  D+   E  Y L+ GL  R+L      AL   L ALD+ ++ +    +G
Sbjct:   27 LKRLGLDRVVDILFHLPVNWIDRKKVDAIDMADAGRVVTVEVTPVDYRQSGGRGPFRVAARDRAGNILTLTYF-NNPGWA----RKQLPLGEARVVSG--RMDSWGMELQMVHPDYALPPEEAGDLPEREPVYSLSEGLSNRRLADFAAQAL-ARLPALDEWIEPSVLTTRG 190          
BLAST of mRNA_S-ischiensis_contig92.20945.1 vs. uniprot
Match: A0A1G3I928_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 TaxID=1802022 RepID=A0A1G3I928_9PROT)

HSP 1 Score: 76.3 bits (186), Expect = 1.530e-12
Identity = 53/148 (35.81%), Postives = 80/148 (54.05%), Query Frame = 0
Query:   13 VSGLLWHLPVDVIDRRRCGNVDDAIEGEVLTIVLQLKKLV-PAKGDGPNKVECQDANGTAIGLVFWGGHKNWTWQTIRSSFVKGQARVVSGVARYNTFLDRWEISGPDVVAPLEQLSDVLSVEARYKLTTGLGQRKLRGTLRSALDTA 159
            V  L WHLP  VIDRR    V +A  G V TI +++ + V PA    P KV C D  G  + L+F+  H ++    ++    +G+ RVVSG  + + F    +I+ PD +A L+++S + +VE  Y L+ GL  + L   L  AL +A
Sbjct:   35 VVDLYWHLPGGVIDRRYAPVVAEARPGVVATITVKVDRHVKPANRRLPYKVYCSDDTGV-LALIFFHAHGDY----LKRVLPEGERRVVSG--KVDIFNQEVQITHPDHIATLDEISSLQAVEPVYPLSAGLSLKVLNKALAFALKSA 175          
BLAST of mRNA_S-ischiensis_contig92.20945.1 vs. uniprot
Match: A0A2A5H4F4_9PROT (ATP-dependent DNA helicase RecG n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A2A5H4F4_9PROT)

HSP 1 Score: 75.9 bits (185), Expect = 2.070e-12
Identity = 59/170 (34.71%), Postives = 93/170 (54.71%), Query Frame = 0
Query:    5 LSKLGIKSVSG-----LLWHLPVDVIDRRRCGNVDDAIEGEVLTIVLQLKKLVP-AKGDGPNKVECQDANGTAIGLVFWGGHKNWTWQTIRSSFVKGQARVVSGVARYNTFLDRWEISGPDVVAPLEQLSDVLSVEARYKLTTGLGQRKLRGTLRSALDTALQALDDVLD 168
            +SKL  K + G     LL+H PVD IDRR    + D   G+V+T+ +++ K VP A+   P +V   D +G AI LVF+  H N +W  I+     GQ+ ++SG   Y  F  + ++  PD+  P E+   + +VEA Y LT G+  + +R  + +A+ T +  L + LD
Sbjct:   25 ISKLMEKLIEGPKTLDLLFHAPVDFIDRRFSCPISDCPNGKVVTMEVRIDKHVPNARKSLPYRVRATDDSG-AISLVFF--HANQSW--IKKLLPIGQSVIISGKIEY--FQGQPQMMHPDIAKP-EERETLETVEAIYPLTQGVTNKTIRKAINAAM-THIPTLPEWLD 185          
BLAST of mRNA_S-ischiensis_contig92.20945.1 vs. uniprot
Match: A0A2E2WIB2_9PROT (ATP-dependent DNA helicase RecG n=1 Tax=Micavibrio sp. TaxID=2024841 RepID=A0A2E2WIB2_9PROT)

HSP 1 Score: 73.6 bits (179), Expect = 1.290e-11
Identity = 49/164 (29.88%), Postives = 85/164 (51.83%), Query Frame = 0
Query:    8 LGIKSVSGLLWHLPVDVIDRRRCGNVDDAIEGEVLTIVLQLKKLVPAKGDG-PNKVECQDANGTAIGLVFWGGHKNWTWQTIRSSFVKGQARVVSGVARYNTFLDRWEISGPDVVAPLEQLSDVLSVEARYKLTTGLGQRKLRGTLRSALDTALQALDDVLDKN 170
            LG   +  LL+H PVD +DRR    +++A  G++ TI ++++K+ PA   G P +V+C D  G+ I +VF+  +K W    I      G   ++SG   Y  +  + ++  PD +    + S + ++E  Y LT G+  +    TL  A+  ALQ +  + + N
Sbjct:   32 LGGGKIIDLLFHSPVDFVDRRFSPALNEAPNGKIATIEVRVEKITPATRRGLPTRVKCTDGTGS-IDIVFFNANKPW----IEKQMPIGSVVILSGKIEY--YQGQAQMVHPDAIGQPSERSSIETIEPVYGLTAGVTNK----TLHKAMAGALQIIPKLPEWN 184          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig92.20945.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2S6QBQ0_9PROT2.970e-1632.11ATP-dependent DNA helicase RecG n=1 Tax=Alphaprote... [more]
A0A2D6K0L1_9PROT4.650e-1536.67ATP-dependent DNA helicase RecG n=1 Tax=Micavibrio... [more]
A0A2D5Y0Q9_9PROT9.850e-1433.77ATP-dependent DNA helicase RecG n=1 Tax=Micavibrio... [more]
G2KQK1_MICAA1.340e-1330.64ATP-dependent DNA helicase RecG n=2 Tax=Micavibrio... [more]
A0A7C7WUE7_9PROT3.350e-1333.33ATP-dependent DNA helicase RecG n=1 Tax=Micavibrio... [more]
A0A1Z8P3T3_9PROT8.310e-1330.00ATP-dependent DNA helicase RecG n=1 Tax=Rhodospiri... [more]
A0A4P6FSY8_9SPHN1.520e-1230.81ATP-dependent DNA helicase RecG n=2 Tax=Sphingomon... [more]
A0A1G3I928_9PROT1.530e-1235.81ATP-dependent DNA helicase RecG n=1 Tax=Rhodospiri... [more]
A0A2A5H4F4_9PROT2.070e-1234.71ATP-dependent DNA helicase RecG n=3 Tax=Proteobact... [more]
A0A2E2WIB2_9PROT1.290e-1129.88ATP-dependent DNA helicase RecG n=1 Tax=Micavibrio... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033454RecG, wedge domainPFAMPF17191RecG_wedgecoord: 4..156
e-value: 9.4E-8
score: 31.8
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 4..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig92contigS-ischiensis_contig92:346295..355041 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig92.20945.1mRNA_S-ischiensis_contig92.20945.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig92 346295..355041 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig92.20945.1 ID=prot_S-ischiensis_contig92.20945.1|Name=mRNA_S-ischiensis_contig92.20945.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=213bp
MEGHLSKLGIKSVSGLLWHLPVDVIDRRRCGNVDDAIEGEVLTIVLQLKK
LVPAKGDGPNKVECQDANGTAIGLVFWGGHKNWTWQTIRSSFVKGQARVV
SGVARYNTFLDRWEISGPDVVAPLEQLSDVLSVEARYKLTTGLGQRKLRG
TLRSALDTALQALDDVLDKNAFQGQGEEESVFRRRPLSRRSGGEHRDRGH
VRDPDDELLECDG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033454RecG_wedge
IPR012340NA-bd_OB-fold