prot_S-ischiensis_contig90.20883.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig90.20883.1
Unique Nameprot_S-ischiensis_contig90.20883.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length227
Homology
BLAST of mRNA_S-ischiensis_contig90.20883.1 vs. uniprot
Match: D7FXG5_ECTSI (Arginine/serine-rich splicing factor 6 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXG5_ECTSI)

HSP 1 Score: 253 bits (647), Expect = 4.200e-82
Identity = 118/157 (75.16%), Postives = 141/157 (89.81%), Query Frame = 0
Query:    7 RIYVGHLSTRTRDRDLDRAFSRFGRIEKVDVRLGYAFVEFDDPRDAEDAVRSMDGRELDGARIVVERGRGHRPNGPKGPTRRTDYRVKVTNLDAYTSWQDLKDFGRKAGQVLYSDVYMRQGQRFGVLEYVSKDDMKDAIRNLDDTRLGGQYVRVQKE 163
            RIY+GHLS  TRDRDLDRAF R+GRIEK+DVR+G+AF+EF+D RDAEDAV  MDGRE DGARIVV+ GRGHRPNGPK  TRRT++R+ V  LD++TSWQDLKDFGR+AGQVLYSDV+ RQG+R+GV+EYVS+DDMK AIR LDDTRLGG+Y+RV++E
Sbjct:    4 RIYIGHLSPHTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAEDAVAEMDGREFDGARIVVQPGRGHRPNGPKFATRRTEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGRRWGVVEYVSRDDMKAAIRTLDDTRLGGKYIRVREE 160          
BLAST of mRNA_S-ischiensis_contig90.20883.1 vs. uniprot
Match: A0A7S0Q5F1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q5F1_9EUKA)

HSP 1 Score: 168 bits (425), Expect = 9.800e-50
Identity = 77/142 (54.23%), Postives = 109/142 (76.76%), Query Frame = 0
Query:    5 GTRIYVGHLSTRTRDRDLDRAFSRFGRIEKVDVRLGYAFVEFDDPRDAEDAVRSMDGRELDGARIVVERGRGHRPNGPKGPTRRTDYRVKVTNLDAYTSWQDLKDFGRKAGQVLYSDVYMRQGQRFGVLEYVSKDDMKDAIR 146
            GTR+YVG LS+ TR+RDL+R F R+GR+E+VD++ G+AFVEF D RDA+DAV  M GR+LDG RI VE  +G R  G +GP + + +R+KV  LD  TSWQDLKDFGRK G ++Y+DV++   ++FG++EY  K+D ++A++
Sbjct:    4 GTRVYVGGLSSYTRERDLERVFDRYGRVERVDLKRGFAFVEFSDDRDADDAVYDMHGRDLDGRRITVEHAKGGR--GARGPAKGSGFRIKVEGLDMRTSWQDLKDFGRKVGDIMYTDVWVDGSKKFGIMEYGRKEDYEEALK 143          
BLAST of mRNA_S-ischiensis_contig90.20883.1 vs. uniprot
Match: L1JS00_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JS00_GUITC)

HSP 1 Score: 165 bits (418), Expect = 3.580e-47
Identity = 81/157 (51.59%), Postives = 110/157 (70.06%), Query Frame = 0
Query:    7 RIYVGHLSTRTRDRDLDRAFSRFGRIEKVDVRLGYAFVEFDDPRDAEDAVRSMDGRELDGARIVVERGRGHRPNGPKGPTRRTDYRVKVTNLDAYTSWQDLKDFGRKAGQVLYSDVYMRQGQRFGVLEYVSKDDMKDAIRNLDDTRLGGQYVRVQKE 163
            R+YVGHLS+R R+RDLD  FSRFG+I  + ++ G+AFVE+D   DAE AVR MDG  L+G RI+VE  +     GP+G +    YR+   NL   TSWQDLKDF RKAG+V+Y+DV+  +G++ GV+EY +++DM+DA+  LD T L    VR+ KE
Sbjct:    6 RVYVGHLSSRVRERDLDDEFSRFGKIRDISLKQGFAFVEYDHSEDAEYAVRKMDGVNLEGMRILVEFAKETPKRGPRGGS---GYRIYAENLSQNTSWQDLKDFARKAGKVIYTDVFSERGEKLGVIEYATREDMEDALYKLDGTELHRSKVRLVKE 159          
BLAST of mRNA_S-ischiensis_contig90.20883.1 vs. uniprot
Match: A0A7S0DYD6_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0DYD6_9CRYP)

HSP 1 Score: 164 bits (414), Expect = 1.110e-46
Identity = 80/157 (50.96%), Postives = 110/157 (70.06%), Query Frame = 0
Query:    7 RIYVGHLSTRTRDRDLDRAFSRFGRIEKVDVRLGYAFVEFDDPRDAEDAVRSMDGRELDGARIVVERGRGHRPNGPKGPTRRTDYRVKVTNLDAYTSWQDLKDFGRKAGQVLYSDVYMRQGQRFGVLEYVSKDDMKDAIRNLDDTRLGGQYVRVQKE 163
            R+YVGHLS+R R+RDLD  FSRFG+I  + ++ G+AFVE+D   DAE AVR MDG  L+G RI+VE  +     GPKG +    YR+   NL   TSWQDLKDF RKAG+V+++DV+  +G+R G++EY ++DDM++A+  LD T L    VR+ K+
Sbjct:   13 RVYVGHLSSRVRERDLDDEFSRFGKIRDISLKQGFAFVEYDHSEDAEYAVRKMDGVNLEGMRILVEFAKETPKRGPKGGS---GYRLYAENLSQNTSWQDLKDFARKAGKVIFTDVFSERGERLGIIEYATRDDMEEALYKLDGTELHRSKVRLVKD 166          
BLAST of mRNA_S-ischiensis_contig90.20883.1 vs. uniprot
Match: A0A7S0YN20_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YN20_9CRYP)

HSP 1 Score: 152 bits (384), Expect = 4.390e-43
Identity = 77/157 (49.04%), Postives = 108/157 (68.79%), Query Frame = 0
Query:    6 TRIYVGHLSTRTRDRDLDRAFSRFGRIEKVDVRLGYAFVEFDDPRDAEDAVRSMDGRELDGARIVVERGRGHRPNGPKGPTRRTDYRVKVTNLDAYTSWQDLKDFGRKAGQVLYSDVYMRQGQRFGVLEYVSKDDMKDAIRNLDDTRLGGQYVRVQK 162
            +RIYVG+LS R R+RDLD  F R+GRI  + ++ G+AF+EF+ P DA  A+R +DG  LDG R+ VE+ +     GP+ P + T +RV V NL   TSWQDLKDFGR  G+VLY+DV+  +G + GV+E+ +K+DM++AI  LD   L G  V++ K
Sbjct:   20 SRIYVGNLSHRLRERDLDDEFGRYGRIRDIFLKSGFAFIEFERPDDASYAIRKLDGVTLDGQRLQVEKAKEAPKRGPR-PGQSTGFRVTVENLSVATSWQDLKDFGRTGGRVLYTDVHNERGGKVGVIEFETKEDMEEAIDRLDGRDLQGNRVKLFK 175          
BLAST of mRNA_S-ischiensis_contig90.20883.1 vs. uniprot
Match: A0A1Y1L1P2_PHOPY (Uncharacterized protein n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1L1P2_PHOPY)

HSP 1 Score: 154 bits (390), Expect = 6.490e-43
Identity = 81/175 (46.29%), Postives = 116/175 (66.29%), Query Frame = 0
Query:    5 GTRIYVGHLSTRTRDRDLDRAFSRFGRIEKVDVRLGYAFVEFDDPRDAEDAVRSMDGRELDGARIVVERGRG-------------HRPNGPKGPTRRTDYRVKVTNLDAYTSWQDLKDFGRKAGQVLYSDVYMRQGQRFGVLEYVSKDDMKDAIRNLDDTRLGGQYVRVQKERRS 166
            G+R+YVG L  RT +RDL+R F  +GR+  V ++ GY FVEFDD RDA+DAV  ++G++L G R+ VER RG             HR +   GP  RT+YRV + NL +  SWQDLKD+ R+AG+V Y+D + ++ +  GV+E+ S  DMK+AI  LDDT L G+ ++V +++RS
Sbjct:    3 GSRVYVGGLPYRTTERDLERFFKSYGRMRDVLIKNGYGFVEFDDYRDADDAVYELNGKKLLGERVTVERARGTPRGRDQWSMRSDHRSHERYGPPARTNYRVIIENLSSRVSWQDLKDYMRQAGEVTYADAH-KEHRNQGVVEFASYSDMKNAIEKLDDTDLNGRKIKVVQDKRS 176          
BLAST of mRNA_S-ischiensis_contig90.20883.1 vs. uniprot
Match: A0A1B6M680_9HEMI (Uncharacterized protein n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6M680_9HEMI)

HSP 1 Score: 152 bits (383), Expect = 4.090e-42
Identity = 80/188 (42.55%), Postives = 120/188 (63.83%), Query Frame = 0
Query:    5 GTRIYVGHLSTRTRDRDLDRAFSRFGRIEKVDVRLGYAFVEFDDPRDAEDAVRSMDGRELDGARIVVERGRG-------------------------HRPNGPKGPTRRTDYRVKVTNLDAYTSWQDLKDFGRKAGQVLYSDVYMRQGQRFGVLEYVSKDDMKDAIRNLDDTRLGGQYVRVQKERRSN 167
            GTR++VG L+ R R+RDL+R F ++GRI++V ++ G+AFVEFDD RDA+DAV  ++G+EL G R++VE  RG                         HR +   GP  RT+YR+ V NL    SWQDLKD+ R+AG+V Y+D + +  +  GV+E+ +  DMK+A+  LDDT L G+ +R+ ++RR++
Sbjct:    2 GTRVFVGGLTYRVRERDLERFFRKYGRIKEVAMKNGFAFVEFDDHRDADDAVYELNGKELLGERVIVELARGTARRSDRSFGGSSRRRSSWYGKEPDHRISDRYGPPTRTEYRLIVENLSTRVSWQDLKDYMRQAGEVTYADAH-KDRRNEGVVEFATSSDMKNALDKLDDTELNGRRIRLVEDRRNS 188          
BLAST of mRNA_S-ischiensis_contig90.20883.1 vs. uniprot
Match: UPI00096B0064 (serine-arginine protein 55-like n=1 Tax=Aethina tumida TaxID=116153 RepID=UPI00096B0064)

HSP 1 Score: 152 bits (385), Expect = 6.160e-42
Identity = 82/184 (44.57%), Postives = 121/184 (65.76%), Query Frame = 0
Query:    5 GTRIYVGHLSTRTRDRDLDRAFSRFGRIEKVDVRLGYAFVEFDDPRDAEDAVRSMDGRELDGARIVVERGRGH---------------RPNGPK--------GPTRRTDYRVKVTNLDAYTSWQDLKDFGRKAGQVLYSDVYMRQGQRFGVLEYVSKDDMKDAIRNLDDTRLGGQYVRVQKERR 165
            GTR++VG L+ R R+RD+++ F ++GRI++V ++ G+AFVEFDD RDA+DAV  ++G+EL G R+ VER RG                R  GP         GP  RT+YR+ V NL +  SWQDLKD+ R+AG+V Y+D + +Q +  GV+E+ S  DMK+AI  LDDT L G+++ ++++RR
Sbjct:    2 GTRVFVGGLTYRVRERDIEKFFRKYGRIKEVAMKNGFAFVEFDDYRDADDAVYELNGKELLGERVSVERARGTPRGSDQWRGNGGGGGRSYGPPRGRSRDKYGPPTRTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAH-KQRRNEGVVEFASYSDMKNAIEKLDDTDLNGRHIHLREDRR 184          
BLAST of mRNA_S-ischiensis_contig90.20883.1 vs. uniprot
Match: A0A2B4SSR0_STYPI (Serine/arginine-rich splicing factor 4 n=6 Tax=Scleractinia TaxID=6125 RepID=A0A2B4SSR0_STYPI)

HSP 1 Score: 153 bits (386), Expect = 8.640e-42
Identity = 83/180 (46.11%), Postives = 117/180 (65.00%), Query Frame = 0
Query:    1 MSAPGTRIYVGHLSTRTRDRDLDRAFSRFGRIEKVDVRLGYAFVEFDDPRDAEDAVRSMDGRELDGARIVVERGRG--------------HRPNGPKG--PTRRTDYRVKVTNLDAYTSWQDLKDFGRKAGQVLYSDVYMRQGQRFGVLEYVSKDDMKDAIRNLDDTRLGGQYVRVQKER 164
            MS  GTR+Y G L   TR+RDL+R    FGRI +V ++LGY FVEFDDPRDA+D V  ++GREL G R+VVE  R               +R N  +G  P  RT++R+ V NL +  +WQDLK++  KAG+V ++D + R+ Q  GV+E+ SK+DMK A++ LDDT L G+ +R++ E+
Sbjct:    1 MSRGGTRVYFGRLPRDTRERDLERFVRGFGRIREVSIKLGYGFVEFDDPRDADDCVYDLNGRELLGERVVVEHARNPSRSQDYGYRSQPSNRNNQRRGRTPPLRTEHRLAVENLSSRINWQDLKEYISKAGEVTFADAHKRR-QGEGVVEFASKEDMKAALKKLDDTELHGKRIRLKIEK 179          
BLAST of mRNA_S-ischiensis_contig90.20883.1 vs. uniprot
Match: V5GNC3_ANOGL (Serine/arginine-rich splicing factor (Fragment) n=2 Tax=Anoplophora glabripennis TaxID=217634 RepID=V5GNC3_ANOGL)

HSP 1 Score: 151 bits (381), Expect = 1.100e-41
Identity = 82/193 (42.49%), Postives = 121/193 (62.69%), Query Frame = 0
Query:    5 GTRIYVGHLSTRTRDRDLDRAFSRFGRIEKVDVRLGYAFVEFDDPRDAEDAVRSMDGRELDGARIVVERGRG-------------------------HRPNGPKG-----PTRRTDYRVKVTNLDAYTSWQDLKDFGRKAGQVLYSDVYMRQGQRFGVLEYVSKDDMKDAIRNLDDTRLGGQYVRVQKERRSN 167
            GTR++VG L+ + R+RDL++ F ++GRI++V ++ GYAFVEFDD RDA+DAV  ++G+EL G R+ VER RG                          R + P+G     P  RT+YRV V NL +  SWQDLKD+ RKAG+V Y+D + +     GV+E+ S  DMK+AI  LDDT + G+ +R+ +++R++
Sbjct:    2 GTRVFVGGLTYKIRERDLEKFFRKYGRIKEVSMKNGYAFVEFDDHRDADDAVYELNGKELLGDRVTVERARGTPRGSDQWRGRDGGGXXXRGYGPPRSRSDNPRGRDKYGPPTRTEYRVIVENLSSRCSWQDLKDYMRKAGEVTYADAH-KLAPNEGVVEFASYSDMKNAIEKLDDTEINGRKIRLVEDKRAS 193          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig90.20883.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXG5_ECTSI4.200e-8275.16Arginine/serine-rich splicing factor 6 n=2 Tax=Ect... [more]
A0A7S0Q5F1_9EUKA9.800e-5054.23Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
L1JS00_GUITC3.580e-4751.59Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
A0A7S0DYD6_9CRYP1.110e-4650.96Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S0YN20_9CRYP4.390e-4349.04Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A1Y1L1P2_PHOPY6.490e-4346.29Uncharacterized protein n=1 Tax=Photinus pyralis T... [more]
A0A1B6M680_9HEMI4.090e-4242.55Uncharacterized protein n=1 Tax=Graphocephala atro... [more]
UPI00096B00646.160e-4244.57serine-arginine protein 55-like n=1 Tax=Aethina tu... [more]
A0A2B4SSR0_STYPI8.640e-4246.11Serine/arginine-rich splicing factor 4 n=6 Tax=Scl... [more]
V5GNC3_ANOGL1.100e-4142.49Serine/arginine-rich splicing factor (Fragment) n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 92..161
e-value: 3.4E-9
score: 46.6
coord: 7..72
e-value: 7.8E-20
score: 81.9
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 8..69
e-value: 6.1E-16
score: 58.0
coord: 94..158
e-value: 5.2E-10
score: 39.0
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 91..165
score: 10.514
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 6..76
score: 17.626
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..91
e-value: 2.8E-22
score: 81.2
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 92..164
e-value: 3.8E-18
score: 67.2
NoneNo IPR availablePANTHERPTHR23003RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEINcoord: 5..220
NoneNo IPR availablePANTHERPTHR23003:SF30SERINE/ARGININE-RICH-SPLICING FACTOR 5A-RELATEDcoord: 5..220
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 4..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig90contigS-ischiensis_contig90:448132..458629 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig90.20883.1mRNA_S-ischiensis_contig90.20883.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig90 447794..458736 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig90.20883.1 ID=prot_S-ischiensis_contig90.20883.1|Name=mRNA_S-ischiensis_contig90.20883.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=227bp
MSAPGTRIYVGHLSTRTRDRDLDRAFSRFGRIEKVDVRLGYAFVEFDDPR
DAEDAVRSMDGRELDGARIVVERGRGHRPNGPKGPTRRTDYRVKVTNLDA
YTSWQDLKDFGRKAGQVLYSDVYMRQGQRFGVLEYVSKDDMKDAIRNLDD
TRLGGQYVRVQKERRSNSRSRSRDSSRSRSRSADSRASSRGRDRGRKRSR
SPEREKPTRSRSRSPARHSRSRSRSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf