prot_S-ischiensis_contig90.20880.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig90.20880.1
Unique Nameprot_S-ischiensis_contig90.20880.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length481
Homology
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BLAST of mRNA_S-ischiensis_contig90.20880.1 vs. uniprot
Match: D7G1Z3_ECTSI (Catabolite repression protein creC n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Z3_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 2.930e-11
Identity = 48/118 (40.68%), Postives = 58/118 (49.15%), Query Frame = 0 
Query:   12 LERRTAPRADPLCSKTLAFMPLCQVAFTRTGLVTLCGEGFLKLWTRPAMQSPLPPLMPPAAAVADRAGDPRHAAAELGGEFVSRGK--DDGAAAASLPGHGQDEEAAVEAIGRLSVSV 127
            L R++ PR +PLC K LA +PL QV   R G+VTLC EG LKLW RP M  PLPPL                   ++ G    RGK  D G+   S    GQ EEA   +    S S+
Sbjct:  857 LSRQSTPRGEPLCCKRLAQVPLSQVMVVRAGVVTLCAEGLLKLWARPTMPPPLPPL-------------------QMDGADFGRGKGDDSGSGGTSAAMDGQQEEAGTASPSLESSSL 955
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BLAST of mRNA_S-ischiensis_contig90.20880.1 vs. uniprot
Match: A0A6H5L471_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L471_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 3.740e-10
Identity = 36/69 (52.17%), Postives = 42/69 (60.87%), Query Frame = 0 
Query:   12 LERRTAPRADPLCSKTLAFMPLCQVAFTRTGLVTLCGEGFLKLWTRPAMQSPLPPLMPPAAAVADRAGD 80
            L R+  PR +PLC K LA +PL QV   R G+VTLC +G LKLW RP M  PLPPL    A    + GD
Sbjct:  995 LSRQLTPRGEPLCCKRLAQVPLSQVMVVRAGVVTLCADGLLKLWARPTMPPPLPPLQVDGADFGRKKGD 1063
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig90.20880.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1Z3_ECTSI2.930e-1140.68Catabolite repression protein creC n=1 Tax=Ectocar... [more]
A0A6H5L471_9PHAE3.740e-1052.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig90contigS-ischiensis_contig90:398112..400963 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig90.20880.1mRNA_S-ischiensis_contig90.20880.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig90 398112..400964 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig90.20880.1 ID=prot_S-ischiensis_contig90.20880.1|Name=mRNA_S-ischiensis_contig90.20880.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=481bp
VSTPLARRVVRLERRTAPRADPLCSKTLAFMPLCQVAFTRTGLVTLCGEG
FLKLWTRPAMQSPLPPLMPPAAAVADRAGDPRHAAAELGGEFVSRGKDDG
AAAASLPGHGQDEEAAVEAIGRLSVSVPEDLGDDHPPGDMAAAAAAAAAA
AAPAATNLVGGNGGGAAAPPPPPTPPSPPHLNGSSSGDGSGSGGGGSGGG
GSGSGGRRSWVPGTGGAKGAAAASAATAAIADRESLIRMDLITPKGGGPS
GCGAGGEDPAAAGGRGGGRKKSFSSFLSLRRPFFVGAEKSGGGGGGGGSS
MSTSTSAGTGMSGLPIVSHGNGPSARAGAGAGAAAAAAPQASSTSSGWPG
GASGSGSWSSSSVPSESSSRGPGARRRGPGAAPAPEAAASAAAQAGPTPP
QVVTAAPAQAVEPLAPVVRSGSDASAIAAAVAAVPAGARHGKLPGPASGH
RGGPDAADSTQATARAAGAAATVRAGGPATP
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