prot_S-ischiensis_contig90.20863.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig90.20863.1
Unique Nameprot_S-ischiensis_contig90.20863.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length69
Homology
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BLAST of mRNA_S-ischiensis_contig90.20863.1 vs. uniprot
Match: D7G3X8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3X8_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 2.330e-11
Identity = 33/54 (61.11%), Postives = 41/54 (75.93%), Query Frame = 0 
Query:   10 GAFRPGSRVSHHHAMVTSLFERLRAVTSLAQAMQKERHRQAKANKQRFYAGPSD 63
            G  RPGSR +H +A VT LFERL+AVT +A+AMQ ERH +A A + RFY GP+D
Sbjct:  106 GELRPGSRPAHENAAVTFLFERLKAVTEVAEAMQTERHARAAAGQSRFYGGPAD 159
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig90.20863.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3X8_ECTSI2.330e-1161.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig90contigS-ischiensis_contig90:229867..231349 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig90.20863.1mRNA_S-ischiensis_contig90.20863.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig90 229867..231350 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig90.20863.1 ID=prot_S-ischiensis_contig90.20863.1|Name=mRNA_S-ischiensis_contig90.20863.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=69bp
GGGATPDQEGAFRPGSRVSHHHAMVTSLFERLRAVTSLAQAMQKERHRQA
KANKQRFYAGPSDGDLRGT
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