prot_S-ischiensis_contig90.20847.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig90.20847.1
Unique Nameprot_S-ischiensis_contig90.20847.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length217
Homology
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BLAST of mRNA_S-ischiensis_contig90.20847.1 vs. uniprot
Match: D8LKQ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKQ8_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 9.870e-9
Identity = 35/80 (43.75%), Postives = 50/80 (62.50%), Query Frame = 0 
Query:    2 AGAKVAHLSTLRWTGDG-NPWDAPPASPPPVFVGNGRRAWHGGLITTNKNQALAGFLRRKLEKGEELTTAQVALLKEMAH 80
            A +K   L       DG NPW+    +PPP+     R AW GG I +NK++ALA FLRRK+++G+ LT  Q+A+L+ MA+
Sbjct:    3 APSKTVCLRAFNKDLDGTNPWERQGPTPPPLPK---RIAWPGGKIVSNKDEALANFLRRKVDQGQTLTPEQMAMLRRMAY 79
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BLAST of mRNA_S-ischiensis_contig90.20847.1 vs. uniprot
Match: A0A6H5L4S5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4S5_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 2.560e-8
Identity = 35/80 (43.75%), Postives = 49/80 (61.25%), Query Frame = 0 
Query:    2 AGAKVAHLSTLRWTGDG-NPWDAPPASPPPVFVGNGRRAWHGGLITTNKNQALAGFLRRKLEKGEELTTAQVALLKEMAH 80
            A +K   L       DG NPW+    +PPP+     R AW GG I +NK++ALA FLRRK+++G+ LT  Q+ +LK MA+
Sbjct:    3 APSKTVCLRAFNKDLDGTNPWERQGPAPPPLPK---RIAWPGGKIVSNKDEALANFLRRKVDQGQTLTPEQMTMLKRMAY 79
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig90.20847.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKQ8_ECTSI9.870e-943.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4S5_9PHAE2.560e-843.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig90contigS-ischiensis_contig90:72899..76067 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig90.20847.1mRNA_S-ischiensis_contig90.20847.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig90 72867..76067 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig90.20847.1 ID=prot_S-ischiensis_contig90.20847.1|Name=mRNA_S-ischiensis_contig90.20847.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=217bp
MAGAKVAHLSTLRWTGDGNPWDAPPASPPPVFVGNGRRAWHGGLITTNKN
QALAGFLRRKLEKGEELTTAQVALLKEMAHQAPTPTAAAAELVRRDTSTA
AAAATHARGDRAPNRGSDGGRRAKGRRGRGGKREGSVVEPSGGDDSGTTA
AVRATLVAWLKKVEDQPSCLEPTRKRPRSSREEEDDGDNYDDDGGGGGDG
GGGGSSHRGLSRGQQPP
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