prot_S-ischiensis_contig9.20784.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20784.1
Unique Nameprot_S-ischiensis_contig9.20784.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length119
Homology
BLAST of mRNA_S-ischiensis_contig9.20784.1 vs. uniprot
Match: D8LN51_ECTSI (Whsc1 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN51_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 5.640e-17
Identity = 36/63 (57.14%), Postives = 43/63 (68.25%), Query Frame = 0
Query:    4 EVYCLCRGGDYGGVMVGCDFCEEWYHVICVGLVPRQLRKDRAYACMVCSEAEPRRHRGGYAHR 66
            +VYC+CRGGD GGVMV CD C EWYH  CVGL  +   + + Y C+VC EA P +H G Y HR
Sbjct: 1488 DVYCICRGGDDGGVMVECDLCGEWYHASCVGLTAQTAGELQQYRCLVCCEAHPEKH-GPYKHR 1549          
BLAST of mRNA_S-ischiensis_contig9.20784.1 vs. uniprot
Match: A0A164NC75_9CRUS (CXXC-type zinc finger protein 1 n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A164NC75_9CRUS)

HSP 1 Score: 67.0 bits (162), Expect = 1.450e-10
Identity = 23/56 (41.07%), Postives = 35/56 (62.50%), Query Frame = 0
Query:    1 MEEEVYCLCRGGDYGGVMVGCDFCEEWYHVICVGLVPRQLRKDRAYACMVCSEAEP 56
            +EE+VYC+CR  D    M+GCD+CEEWYH  C+ +   + R  + + C  C + +P
Sbjct:   30 LEEQVYCICRSSDASRFMIGCDYCEEWYHGDCIDITEEESRFIKKFFCPKCRQRDP 85          
BLAST of mRNA_S-ischiensis_contig9.20784.1 vs. uniprot
Match: A0A0P5HZJ2_9CRUS (CXXC-type zinc finger protein 1 n=2 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5HZJ2_9CRUS)

HSP 1 Score: 67.0 bits (162), Expect = 1.560e-10
Identity = 23/56 (41.07%), Postives = 35/56 (62.50%), Query Frame = 0
Query:    1 MEEEVYCLCRGGDYGGVMVGCDFCEEWYHVICVGLVPRQLRKDRAYACMVCSEAEP 56
            +EE+VYC+CR  D    M+GCD+CEEWYH  C+ +   + R  + + C  C + +P
Sbjct:   30 LEEQVYCICRSSDASRFMIGCDYCEEWYHGDCIDITEEESRFIKKFFCPKCRQRDP 85          
BLAST of mRNA_S-ischiensis_contig9.20784.1 vs. uniprot
Match: E9HNH3_DAPPU (CXXC-type zinc finger protein 1 n=4 Tax=Daphnia TaxID=6668 RepID=E9HNH3_DAPPU)

HSP 1 Score: 65.9 bits (159), Expect = 3.970e-10
Identity = 22/56 (39.29%), Postives = 35/56 (62.50%), Query Frame = 0
Query:    1 MEEEVYCLCRGGDYGGVMVGCDFCEEWYHVICVGLVPRQLRKDRAYACMVCSEAEP 56
            +EE+VYC+CR  D    M+GCD+CE+WYH  C+ +   + R  + + C  C + +P
Sbjct:   30 LEEQVYCICRSSDASRFMIGCDYCEDWYHGDCIDITEEESRFIKKFFCPKCRQRDP 85          
BLAST of mRNA_S-ischiensis_contig9.20784.1 vs. uniprot
Match: A0A6H5L4N3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4N3_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 4.240e-10
Identity = 24/50 (48.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    4 EVYCLCRGGDYGGVMVGCDFCEEWYHVICVGLVPRQLRKDRAYACMVCSE 53
            EVYC+CR  D  G M+ CDFC++W+HV CVGL  +   +   YAC +C++
Sbjct:  395 EVYCVCRTADVTGTMLECDFCQDWFHVRCVGLTEQDCDRFSKYACPLCTK 444          
BLAST of mRNA_S-ischiensis_contig9.20784.1 vs. uniprot
Match: D7FZH6_ECTSI (WD repeat domain-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH6_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 4.390e-10
Identity = 24/50 (48.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    4 EVYCLCRGGDYGGVMVGCDFCEEWYHVICVGLVPRQLRKDRAYACMVCSE 53
            EVYC+CR  D  G M+ CDFC++W+HV CVGL  +   +   YAC +C++
Sbjct: 3384 EVYCVCRTADVTGTMLECDFCQDWFHVRCVGLTEQDCDRFSKYACPLCTK 3433          
BLAST of mRNA_S-ischiensis_contig9.20784.1 vs. uniprot
Match: A0A7S0RU55_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RU55_9CHLO)

HSP 1 Score: 60.1 bits (144), Expect = 9.250e-9
Identity = 24/55 (43.64%), Postives = 30/55 (54.55%), Query Frame = 0
Query:    4 EVYCLCRGGDYGGVMVGCDFCEEWYHVICVGLVPRQLRK---DRAYACMVCSEAE 55
            ++YC CR  D G  M+GCD+C+ WYH  CVGL    + K   D  Y C  C   E
Sbjct:  104 QLYCKCRSPDDGRFMIGCDYCDGWYHPACVGLKESAVAKWGDDHKYMCAACQRKE 158          
BLAST of mRNA_S-ischiensis_contig9.20784.1 vs. uniprot
Match: A0A167DYW9_9ASCO (Spp1p n=1 Tax=Sugiyamaella lignohabitans TaxID=796027 RepID=A0A167DYW9_9ASCO)

HSP 1 Score: 61.2 bits (147), Expect = 1.590e-8
Identity = 22/52 (42.31%), Postives = 33/52 (63.46%), Query Frame = 0
Query:    2 EEEVYCLCRGGDYGGVMVGCDFCEEWYHVICVGLVPRQLRKDRAYACMVCSE 53
            E  VYC+CR GD G  M+GCDFC++W+H  C+ +   + +    +AC +C E
Sbjct:  166 ESTVYCICRTGDDGRWMIGCDFCDDWFHGDCINMDTVKAKLVMKFACPLCQE 217          
BLAST of mRNA_S-ischiensis_contig9.20784.1 vs. uniprot
Match: A0A3B4B9P6_9GOBI (CXXC-type zinc finger protein 1 n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B4B9P6_9GOBI)

HSP 1 Score: 61.2 bits (147), Expect = 1.640e-8
Identity = 21/52 (40.38%), Postives = 31/52 (59.62%), Query Frame = 0
Query:    5 VYCLCRGGDYGGVMVGCDFCEEWYHVICVGLVPRQLRKDRAYACMVCSEAEP 56
            +YC+CR  D    M+GCD+C EW+H  C+ +  +Q +  R + CM C E  P
Sbjct:   34 LYCICRKPDINCFMIGCDYCNEWFHGHCINITEKQAKAIRQWYCMKCREENP 85          
BLAST of mRNA_S-ischiensis_contig9.20784.1 vs. uniprot
Match: A0A8K1C3S4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3S4_PYTOL)

HSP 1 Score: 60.1 bits (144), Expect = 4.540e-8
Identity = 22/49 (44.90%), Postives = 31/49 (63.27%), Query Frame = 0
Query:    4 EVYCLCRGGDYGGVMVGCDFCEEWYHVICVGLVPRQLRKDRAYACMVCS 52
            E YC+CR   Y G M+GCD+C++W+H +C+GL   +  K   Y C  CS
Sbjct: 1225 ERYCVCRQ-PYDGFMIGCDYCDDWFHDVCIGLSKEKAEKVENYTCPSCS 1272          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20784.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN51_ECTSI5.640e-1757.14Whsc1 protein n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A164NC75_9CRUS1.450e-1041.07CXXC-type zinc finger protein 1 n=1 Tax=Daphnia ma... [more]
A0A0P5HZJ2_9CRUS1.560e-1041.07CXXC-type zinc finger protein 1 n=2 Tax=Daphnia ma... [more]
E9HNH3_DAPPU3.970e-1039.29CXXC-type zinc finger protein 1 n=4 Tax=Daphnia Ta... [more]
A0A6H5L4N3_9PHAE4.240e-1048.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZH6_ECTSI4.390e-1048.00WD repeat domain-containing protein, putative n=1 ... [more]
A0A7S0RU55_9CHLO9.250e-943.64Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A167DYW9_9ASCO1.590e-842.31Spp1p n=1 Tax=Sugiyamaella lignohabitans TaxID=796... [more]
A0A3B4B9P6_9GOBI1.640e-840.38CXXC-type zinc finger protein 1 n=1 Tax=Periophtha... [more]
A0A8K1C3S4_PYTOL4.540e-844.90Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 6..52
e-value: 1.2E-8
score: 44.7
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 6..53
e-value: 9.6E-10
score: 38.2
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 4..54
score: 8.529
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..63
e-value: 9.5E-16
score: 59.0
IPR037869Spp1/CFP1PANTHERPTHR46174FAMILY NOT NAMEDcoord: 3..56
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 7..51
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 3..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:3195605..3196717 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20784.1mRNA_S-ischiensis_contig9.20784.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 3195605..3196748 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20784.1 ID=prot_S-ischiensis_contig9.20784.1|Name=mRNA_S-ischiensis_contig9.20784.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=119bp
MEEEVYCLCRGGDYGGVMVGCDFCEEWYHVICVGLVPRQLRKDRAYACMV
CSEAEPRRHRGGYAHRWITSAGVQEKADIIKKRARVAAAAAAAAAPSPTP
AASAVVATAAAEETMAATR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR019787Znf_PHD-finger
IPR013083Znf_RING/FYVE/PHD
IPR037869Spp1/CFP1
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD