prot_S-ischiensis_contig9.20750.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20750.1
Unique Nameprot_S-ischiensis_contig9.20750.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length258
Homology
BLAST of mRNA_S-ischiensis_contig9.20750.1 vs. uniprot
Match: A0A6H5LEA1_9PHAE (Vesicle-fusing ATPase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LEA1_9PHAE)

HSP 1 Score: 251 bits (641), Expect = 5.930e-75
Identity = 130/206 (63.11%), Postives = 154/206 (74.76%), Query Frame = 0
Query:   53 LPTSETPIDAREAPPSAGSDDNNEDLPLFLQLLERCREATGAEAATAAASVTHTGSSEWAGFRTSPELLEGVQSALARAFPRSMRRDGSALCWDWLTLSPRPLRVELAT--DQRFGVYLTVLPAGRGLPPAHRPLNGCQILSRVLAGEVEQVKANSQRVVGRSTRSADGPVWSSFGGGARRLVNETFRTACVLEVVFYDWRRGQGY 256
            +P+S T    R  P   G      +L L  +LLERC EAT ++AA   A  +HTGSSEWAGF+T+P LLEGV++ L+RA  RS   DGSAL W WLTLSPRP+RV +AT  D R GVYLTVLPAG G PP+HRP+ GC ILSRVLAGEVEQVK+NS+RV+GRST S + PVWSSFGGGARRL+NE+F+ A +LEVV YDW RG GY
Sbjct:  109 VPSSTTTAGGRSVPDGEG------ELTLLDELLERCAEATKSDAA---AESSHTGSSEWAGFKTAPALLEGVRAVLSRARQRSRHSDGSALAWSWLTLSPRPVRVAVATPEDGRVGVYLTVLPAGNGNPPSHRPMYGCHILSRVLAGEVEQVKSNSKRVIGRSTHSLETPVWSSFGGGARRLINESFQPAVILEVVMYDWSRGSGY 305          
BLAST of mRNA_S-ischiensis_contig9.20750.1 vs. uniprot
Match: A0A836CBN6_9STRA (Vesicle-fusing ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN6_9STRA)

HSP 1 Score: 151 bits (381), Expect = 5.140e-38
Identity = 86/181 (47.51%), Postives = 111/181 (61.33%), Query Frame = 0
Query:   78 LPLFLQLLERCREATGAEAATAAASVTHTGSSEWAGFRTSPELLEGVQSALARAFPRSMRRDGSALCWDWLTLSPRPLRVELATDQRFGVYLTVLPAGRGLPPAHRPLNGCQILSRVLAGEVEQVKANSQRVVGRSTRSADGPVWSSFGGGARRLVNETFRTACVLEVVFYDWRRGQGYVT 258
            L +F QLL+ C+ A    AATA  +   +GSSEW+GF T+   L+ V  +L +  P      G++L W WL LS  PLRV L     FGV LTVLP G   PPAHRP+ G  +LS V  G+VEQVKAN QR++ R+  + + P+W+SFGGG RRL N +  TA +LEV+FY  R    Y T
Sbjct:   96 LNVFHQLLQDCQTAAD-YAATAEPADAGSGSSEWSGFWTAEPKLQQVLDSLQQCSPAWRGGRGASLAWSWLGLSTMPLRVMLHQGGGFGVLLTVLPPG-AKPPAHRPMIGAHMLSIVCQGDVEQVKANGQRIINRTRHTPETPIWNSFGGGVRRLANMSVTTAYILEVLFYGKRGPPEYDT 274          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20750.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LEA1_9PHAE5.930e-7563.11Vesicle-fusing ATPase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A836CBN6_9STRA5.140e-3847.51Vesicle-fusing ATPase n=1 Tax=Tribonema minus TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..258
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.923
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:2950843..2954525 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20750.1mRNA_S-ischiensis_contig9.20750.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 2950843..2954547 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20750.1 ID=prot_S-ischiensis_contig9.20750.1|Name=mRNA_S-ischiensis_contig9.20750.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=258bp
MFPCMHLWALLILLALLCGEGFSFTPSPVHFSVTKVHRKCVQVRRHVGRQ
FVLPTSETPIDAREAPPSAGSDDNNEDLPLFLQLLERCREATGAEAATAA
ASVTHTGSSEWAGFRTSPELLEGVQSALARAFPRSMRRDGSALCWDWLTL
SPRPLRVELATDQRFGVYLTVLPAGRGLPPAHRPLNGCQILSRVLAGEVE
QVKANSQRVVGRSTRSADGPVWSSFGGGARRLVNETFRTACVLEVVFYDW
RRGQGYVT
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