prot_S-ischiensis_contig9.20710.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20710.1
Unique Nameprot_S-ischiensis_contig9.20710.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length154
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20710.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 150..153
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 94..151
e-value: 9.5E-5
score: 31.8
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 1..81
e-value: 2.2E-11
score: 45.5
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 2..77
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 2..61
e-value: 1.6E-6
score: 28.1
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 1..58
score: 10.732
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 82..153
e-value: 8.9E-9
score: 36.9
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 95..150
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 92..153
score: 8.92
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 87..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:2732007..2733040 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20710.1mRNA_S-ischiensis_contig9.20710.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 2732004..2734232 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20710.1 ID=prot_S-ischiensis_contig9.20710.1|Name=mRNA_S-ischiensis_contig9.20710.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=154bp
MYVHYKEYVSEPMDLSELGRGLGRGLYDDAEGRALFAEHVRLIGTNCEAF
NGAKATITQSAYRLVDMITRLYSEWVEGAGADVALEHLRDDAATCPVCDE
ALPAAAAGGAAAAAVAALECSVCVKKYHAGCVKPKGPAAARGAAWMCPDC
EKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR036427Bromodomain-like_sf
IPR001487Bromodomain
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR019787Znf_PHD-finger
IPR011011Znf_FYVE_PHD