prot_S-ischiensis_contig9.20703.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20703.1
Unique Nameprot_S-ischiensis_contig9.20703.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length199
Homology
BLAST of mRNA_S-ischiensis_contig9.20703.1 vs. uniprot
Match: A0A6H5KQ21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ21_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 2.880e-43
Identity = 90/183 (49.18%), Postives = 110/183 (60.11%), Query Frame = 0
Query:    2 EKALRAGLDRLVMDTSRSEAVRRCAAVLRELCRHEKAALFVHAVDRLEMPEYYRIISHPVTIKSLLTGLEASVYEAEVGGAAASALEGERSEVENSGGGVGGSGGGLAADPVAGFAANVRRMWENCWCFNHEGSEAWAAAARLSQVFERLLREWVLRASPPPPDLAELVRQDARPCSACGEFD 184
            E  LR  L  L  D  + EAVRRCA VLRE+ RH    +F+  +DR++ PEYY +I  P+T+ SLL  LE         G  A A EG RS+ E              A  V  F  +VRRMWENCW +NHEG++AW AA RLS VFERLLREW+LRA+P PP L +L+  + RPCSACG  D
Sbjct: 1308 ETVLRRRLHGLAEDEGKPEAVRRCAVVLREIARHRLGGVFLFPMDRMQSPEYYAVIEEPITVLSLLDFLEGWSC-----GGTAEASEGGRSKAE------------AEAGLVDEFTISVRRMWENCWSYNHEGTKAWVAAVRLSSVFERLLREWILRATPAPPGLPQLLGGETRPCSACGAVD 1473          
BLAST of mRNA_S-ischiensis_contig9.20703.1 vs. uniprot
Match: D8LI13_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI13_ECTSI)

HSP 1 Score: 162 bits (409), Expect = 1.830e-42
Identity = 89/183 (48.63%), Postives = 109/183 (59.56%), Query Frame = 0
Query:    2 EKALRAGLDRLVMDTSRSEAVRRCAAVLRELCRHEKAALFVHAVDRLEMPEYYRIISHPVTIKSLLTGLEASVYEAEVGGAAASALEGERSEVENSGGGVGGSGGGLAADPVAGFAANVRRMWENCWCFNHEGSEAWAAAARLSQVFERLLREWVLRASPPPPDLAELVRQDARPCSACGEFD 184
            E  LR  L  L  D  + EAVRRCA VLRE+ RH    +F+  +DR++ PEYY +I  P+T+ SLL  LE         G  A A EG  S  E              A  V  F  +VRRMWENCW +NHEG++AW AA RLS VFERLLREW+LRA+P PP L +L+  +ARPCSACG  +
Sbjct:  904 EAVLRRRLHGLAEDEGKPEAVRRCAVVLREIARHRLGGVFLFPMDRMQSPEYYAVIEEPITVLSLLDFLEGWSC-----GGTAEASEGGESTAE------------AEAGLVDEFTISVRRMWENCWSYNHEGTKAWLAAVRLSSVFERLLREWILRATPAPPGLPQLLGSEARPCSACGAVE 1069          
BLAST of mRNA_S-ischiensis_contig9.20703.1 vs. uniprot
Match: A0A7S3QEU5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QEU5_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 4.020e-5
Identity = 39/149 (26.17%), Postives = 66/149 (44.30%), Query Frame = 0
Query:   10 DRLVMDTSRS-EAVRRCAAVLRELCRHEKAALFVHAVDRLEMPEYYRIISHPVTIKSLLTGLEASVYEAEVGGAAASALEGERSEVENSGGGVGGSGGGLAADPVAGFAANVRRMWENCWCFNHEGSEAWAAAARLSQVFERLLREWVL 157
            D    D  R+ E +RRC AVLR LC    A  F++ VD     +YY  +  P+++  +   L+ ++ E           +G+  ++                  VA FA  +R + +N  CF+  G    + A  + ++FERL  +W+L
Sbjct: 1121 DEFCADAPRAPELLRRCLAVLRNLCMSSPADTFLYPVDPQANLKYYESVLRPMSLYDVGRSLQNTIQE----------YQGKWKDI-------------CVESVVAEFARKIRIIGKNPICFSPVGGPLISTAEEMLRIFERLFFDWIL 1246          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20703.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KQ21_9PHAE2.880e-4349.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI13_ECTSI1.830e-4248.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3QEU5_9STRA4.020e-526.17Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 25..142
e-value: 7.4E-12
score: 45.2
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 33..138
score: 10.539
NoneNo IPR availablePANTHERPTHR45926FAMILY NOT NAMEDcoord: 14..154
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 114..155
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 16..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:2715045..2716703 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20703.1mRNA_S-ischiensis_contig9.20703.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 2715045..2716705 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20703.1 ID=prot_S-ischiensis_contig9.20703.1|Name=mRNA_S-ischiensis_contig9.20703.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=199bp
SEKALRAGLDRLVMDTSRSEAVRRCAAVLRELCRHEKAALFVHAVDRLEM
PEYYRIISHPVTIKSLLTGLEASVYEAEVGGAAASALEGERSEVENSGGG
VGGSGGGLAADPVAGFAANVRRMWENCWCFNHEGSEAWAAAARLSQVFER
LLREWVLRASPPPPDLAELVRQDARPCSACGEFDRGVVASVVSGGGAGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf