prot_S-ischiensis_contig9.20677.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20677.1
Unique Nameprot_S-ischiensis_contig9.20677.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length235
Homology
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BLAST of mRNA_S-ischiensis_contig9.20677.1 vs. uniprot
Match: D7G502_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G502_ECTSI)

HSP 1 Score: 141 bits (355), Expect = 8.560e-37
Identity = 71/128 (55.47%), Postives = 89/128 (69.53%), Query Frame = 0 
Query:   79 PVHITPNLDQSQQRRPKTMAVRDVNSYPNAVAVEHSSEIGAMAWAEFADWARRTVNRNVKGESTFQFDHRQWGSSIRKWWIRAVEADEQAKAEFYRLYGRGLQERDAWGRQAVEVDSKVEDEWDSIYL 206
            P+ ITPN    ++RRPK    +DV     A   E S +I AMAW EF+D+ RRTV RN+ G + F FD RQW SSIRKWW RAVE D QAKA+ +RLY   + +RDA G QA++VD++VEDEWDSIY+
Sbjct:   84 PLRITPNFQPQEKRRPKFNVDKDVTY--GAFLTEESFDIAAMAWEEFSDFLRRTVERNLNG-AQFDFDTRQWSSSIRKWWSRAVEMDVQAKADLFRLYDSSVGQRDARGNQALKVDARVEDEWDSIYV 208
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BLAST of mRNA_S-ischiensis_contig9.20677.1 vs. uniprot
Match: A0A836CHX3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHX3_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 2.000e-16
Identity = 47/107 (43.93%), Postives = 63/107 (58.88%), Query Frame = 0 
Query:   79 PVHITPNLDQSQQRRPK---TMAVRDVNSYPNAVAVE----HSSEIGAMAWAEFADWARRTVNRNVKGESTFQFDHRQWGSSIRKWWIRAVEADEQAKAEFYRLYGR 178
            P+ I  NL       P+    M  R+ ++Y NA  V+    H   + AMA AEF DW  RT+ RN++G + F+FD RQW +S+ KWW RA+EADE A+ EF R Y R
Sbjct:   67 PLRIMANLSPRSSGGPRGMRNMQEREFSTYQNAATVDRLNLHFEPMAAMACAEFKDWVARTLARNLEGHA-FEFDTRQWQTSVAKWWGRALEADETARLEFARQYLR 172
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20677.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G502_ECTSI8.560e-3755.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CHX3_9STRA2.000e-1643.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..235
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.675

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:2591339..2595712 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20677.1mRNA_S-ischiensis_contig9.20677.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 2591339..2595860 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20677.1 ID=prot_S-ischiensis_contig9.20677.1|Name=mRNA_S-ischiensis_contig9.20677.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=235bp
MKPIGVELLAVLACLNGLCTFGDAFTGPCRTLSILPRGVECPRRVRTTLA
GPRPAMDSSKDTGRRRGRPLASDDDRDDPVHITPNLDQSQQRRPKTMAVR
DVNSYPNAVAVEHSSEIGAMAWAEFADWARRTVNRNVKGESTFQFDHRQW
GSSIRKWWIRAVEADEQAKAEFYRLYGRGLQERDAWGRQAVEVDSKVEDE
WDSIYLGEGGQAAAHERSNAWGPLAMAARALAGGE
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