prot_S-ischiensis_contig9.20614.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20614.1
Unique Nameprot_S-ischiensis_contig9.20614.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length181
Homology
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BLAST of mRNA_S-ischiensis_contig9.20614.1 vs. uniprot
Match: D7FMW4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMW4_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 1.360e-14
Identity = 34/66 (51.52%), Postives = 47/66 (71.21%), Query Frame = 0 
Query:   54 LTVIAEATELPPFGFHVYWLQERLKERLGFPVSHRAINECLSAYYNLREWQERFFENELPEDAEPF 119
            + V+ EATELPPFGF++  L++RLK RLG  ++  AIN CLS YYNLREW++R+    L  + + F
Sbjct:    1 MAVLDEATELPPFGFNIAVLEQRLKHRLGLEIAQSAINACLSPYYNLREWEDRYVVTSLGSEVQEF 66
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20614.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMW4_ECTSI1.360e-1451.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:1964534..1965076 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20614.1mRNA_S-ischiensis_contig9.20614.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 1964451..1965401 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20614.1 ID=prot_S-ischiensis_contig9.20614.1|Name=mRNA_S-ischiensis_contig9.20614.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=181bp
MPGEGSRASSTAAQAPRSRQSGSRRTKAAGPAAKKKGQGGMVGRASDLSL
EHKLTVIAEATELPPFGFHVYWLQERLKERLGFPVSHRAINECLSAYYNL
REWQERFFENELPEDAEPFSIPDSLLQDVNLSQDSGDEDRRPAFGPQGNG
SAGSAPSSEATGKAQSHGSAEGRASPRDHS*
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