prot_S-ischiensis_contig9.20570.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20570.1
Unique Nameprot_S-ischiensis_contig9.20570.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length758
Homology
BLAST of mRNA_S-ischiensis_contig9.20570.1 vs. uniprot
Match: D7FR28_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR28_ECTSI)

HSP 1 Score: 753 bits (1943), Expect = 4.440e-252
Identity = 382/609 (62.73%), Postives = 454/609 (74.55%), Query Frame = 0
Query:    3 DGGCSDG-PQCECGLPCLELTAGTERNAGRKFYCCSKPQGSEDRCNFFEWVDGDQGGGGGSFSXXXSPVVAVDPADQLDTVDQLRKVFGHHRFRSGQKEVIMSAMAGKDVFVLMPTGGGKSLCYQLPAVCCPGLAVVFSPLISLVQDQVQAMTTIGVEAAYLNSEQDYQSEGRAVMDQLYHLPKYGSLKLLYITPEKLTRSPAMKRCLERLHNRGLLSRFVIDEAHCVSQWGHDFRPDYLQLNTLRGDFPDVPIMALTATADQRVRDDTIWRLGMRDPVVRTESFNRANLMYEIRPKTKHVVDEIAEVVLQKPEDSGIVYCLSRKDCQTVAEKLREKIASGPXXXXXXXRTRVDYYHAERTAQEKAYVHQQWSTGNIHVICATVAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGIRSRCLVFFAFRDKSRLESMVTRDKTIAWQHRRGQLDQLYRCVSFLANEVECRRVLLLEYFGEHFPREKCGRTCDNCRDMVNYSSECRDCSGAAMEILRLSQAIQAKGVRATLTQLVGLWRGETVKKLDSAGCRELRGAGAGRGFKKSEAERVGQQMACNWLLEEAAEETGTS-KTGQNFLATYCKPG 609
            DGG  DG P CE G  C++LT+ +E N GR+FY C  P+   ++C FFEW+DG +G GG   S        V    QLD   ++  +FGH +FR+GQ+EVI+ AM GKDVFVLMPTGGGKSLCYQLPA CCPGLAVVFSPLISLVQDQV  M   GVEAAY+NSEQDY SE R VMDQLY L  YG LKLLYITPEK  RSP+M + L+RLH++GLLSRFVIDEAHCVS WGHDFRPDYL+L  LR DFPDVPIMALTATA+  VRDDTI RL +R+P VRTESFNR NL YEIRPK   V+DEIA+V+   P  SGIVYCLSRKDC+ VA  L +K++          R RVD+YHA+RTA EKA VH++WS G IH+ICAT+AFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDG+ S+C+VFFA+RDK+RLE+MV RDK++ +Q R+  L ++Y+CV F  NEVECRRVL+LE+FGEHFPR +C  TCDNC  M     E +DC+  A  +LRLS+ +  + +R TL QLV +WRG++VK LD  G R+L  AG+ +   K EA RV QQM  +  LEE + +TG S  TGQ F A YC PG
Sbjct:  504 DGG--DGTPLCEHGERCVKLTSTSENNPGREFYKCPLPKNGGEQCGFFEWLDG-EGNGGNRPSGGGGLPGGVANGKQLDIRKEVSDIFGHAKFRTGQEEVIVDAMKGKDVFVLMPTGGGKSLCYQLPACCCPGLAVVFSPLISLVQDQVAQMRATGVEAAYINSEQDYDSEVRVVMDQLYRLQDYGGLKLLYITPEKFCRSPSMNKALQRLHSKGLLSRFVIDEAHCVSDWGHDFRPDYLKLGILRKDFPDVPIMALTATANTVVRDDTIRRLQLRNPTVRTESFNRPNLKYEIRPKKAAVLDEIAKVMQSFPGQSGIVYCLSRKDCEKVASGLLKKLSE--TTGGHRGRFRVDFYHADRTAAEKARVHREWSAGRIHLICATIAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGLDSKCIVFFAYRDKARLENMVNRDKSLPFQRRQSNLQEVYKCVRFCINEVECRRVLILEFFGEHFPRGRCKATCDNCIAMQGCEKETKDCTEQAGRLLRLSEVMVEREIRHTLVQLVSVWRGDSVKTLDQRGARQLECAGSCKDMTKDEAIRVAQQMVLSSFLEEVSCDTGASGATGQAFTAAYCSPG 1107          
BLAST of mRNA_S-ischiensis_contig9.20570.1 vs. uniprot
Match: A0A836CQM3_9STRA (DNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQM3_9STRA)

HSP 1 Score: 606 bits (1562), Expect = 1.900e-200
Identity = 333/637 (52.28%), Postives = 412/637 (64.68%), Query Frame = 0
Query:    8 DGPQCECGLPCLELTAGTERNAGRKFYCCSKPQGSEDRCNFFEWVD--GDQGGGGGSFSXXXSPVVAVDPADQLDTVDQLRKVFGHHRFRSGQKEVIMSAMAGKDVFVLMPTGGGKSLCYQLPAVCCPGLAVVFSPLISLVQDQVQAMTTIGVEAAYLNSEQDYQSEGRAVMDQLYHLPKYGSLKLLYITPEKLTRSPAMKRCLERLHNRGLLSRFVIDEAHCVSQWGHDFRPDYLQLNTLRGDFPDVPIMALTATADQRVRDDT-----IWRLGMRDPVVRTESFNRANLMYEIRPKTKHVVDEIAEVVLQKPEDSGIVYCLSRKDCQTVAEKLREKIASGPXXXXXXXRTRVDYYHAERTAQ----EKAYVHQQWSTGNIHVICATVAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGIRSRCLVFFAFRDKSRLESMVTRDKTIAWQHRRGQLDQLYRCVSFLANEVECRRVLLLEYFGEHFPREKCGRTCDNCRDMVNYSSECRD--CSGAAMEILRLSQAIQAKGVRATLTQLVGLWRGETVKKLDSA--GCRELRGAGAGRGFKKSEAERVGQQMACNWLLEEAAEETGTSKTGQ-NFLATYCKPGHKAGDLLSGKMEFKVVYRT 628
            D P CE GLP +  T+GT  +AGR+FYCCSK + S ++CNFF+W D  G+  G GGS           D + QLD  +QLR VFGH RFR GQ+EV+ +AM G+DVFVL+PTGGGKSLCYQLPAVCCPGL VVFSPL+SLV DQ                     +E   VMD+LY LP +G LKLLYITPEKL +S A+K+ L RL+ RGLLSRFVIDEAHC+S WGHDFRPDYL+L++LR D+P VPIMALTATAD++V DD      + RLG+R+ ++  +SFNR NL YEIR K+K +V++IAEVVL+ P++SGIVYCLS+++C+ V+EKL               R RVD+YHAER  Q    EK   H +W+ G   +ICATVAFGMGINK DVRYVIHHS+PK+LTH YQESGRAGRDG R+ C+VFF+F DK+RL++M+T+                          VECRRVLLL +FGE F R +C  TCDNCR +     E R+  C     E+LRL+  +  +G R TL  L  LWRGE    L +      +L   GAG GF K+EAER+ QQM  +  L+E   ETG    G   F A+Y K GH A  L S    F V+YRT
Sbjct:  248 DAPMCEHGLPAVCRTSGTSVSAGRRFYCCSKGRDSGEQCNFFQWKDVGGEWEGAGGSGQQ-------ADQSQQLDIFEQLRTVFGHLRFRHGQEEVVRAAMRGRDVFVLIPTGGGKSLCYQLPAVCCPGLTVVFSPLLSLVHDQ---------------------AEIAPVMDELYQLPPFGGLKLLYITPEKLDKSGAIKQVLRRLYERGLLSRFVIDEAHCLSDWGHDFRPDYLKLDSLRRDYPKVPIMALTATADKKVMDDAXXXXXVRRLGLREHLLHKQSFNRPNLEYEIRKKSKKIVEDIAEVVLRYPDESGIVYCLSKRECEVVSEKLNAH------EGIRAKRIRVDFYHAERAPQASSSEKKRAHTEWTMGRTKLICATVAFGMGINKIDVRYVIHHSLPKSLTHLYQESGRAGRDGKRAECIVFFSFNDKNRLKNMITK--------------------------VECRRVLLLGHFGEPFQRARCNATCDNCRALAQGGCEAREVNCLQQGRELLRLATQLVLQGRRLTLMHLASLWRGEKHAGLKALLPAAEKLPDFGAGSGFSKAEAERMVQQMVLHHYLDEDTVETGNGGAGGLKFQASYVKRGHLAAGLESNDGAFTVMYRT 824          
BLAST of mRNA_S-ischiensis_contig9.20570.1 vs. uniprot
Match: A0A7S4EMT8_9STRA (DNA helicase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EMT8_9STRA)

HSP 1 Score: 557 bits (1436), Expect = 9.880e-180
Identity = 304/644 (47.20%), Postives = 413/644 (64.13%), Query Frame = 0
Query:    2 GDGGCSDGPQCEC-GLPCLELTAGTERNAGRKFYCCSKPQGSEDRCNFFEWVDGDQGGGGGSFSXXXSPVVAVDPADQLDTVDQLRKVFGHHRFRSGQKEVIMSAMAGKDVFVLMPTGGGKSLCYQLPAVCCPGLAVVFSPLISLVQDQVQAMTTIGVEAAYLNSEQDYQSEGRAVMDQLYHLPKYGSLKLLYITPEKLTRSPAMKRCLERLHNRGLLSRFVIDEAHCVSQWGHDFRPDYLQLNTLRGDFPDVPIMALTATADQRVRDDTIWRLGMRDPVVRTESFNRANLMYEIRPKTKHVVDEIAEVVLQKPEDSGIVYCLSRKDCQTVAEKLREKIASGPXXXXXXXRTRVDYYHAERTAQEKAYVHQQWSTGNIHVICATVAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGIRSRCLVFFAFRDKSRLESMVTRDKTIAWQHR-RGQLDQLYRCVSFLANEVECRRVLLLEYFGEHFPREKCGRTCDNCRDMVNYSSECRDCSGAAMEILRLSQAIQ---AKGVRATLTQLVGLWRGETVKKLD-SAGCRELRGAGAGRGFKKSEAERVGQQMACNWLLEEAAEETGTSKTGQNFLATYCKPGHKAGDLLSGKMEFKVVYRTKLKASEVAARK 639
            GD G  D P+C   GLPC  LTA T  N+GR+F+ CS P+G  + C+FF+W DG +G    +     S   +    D L+  ++ R+VFGH  FR GQ++VI  A+ G+DVFVLMPTGGGKSLCYQLPA CCPGLAVV SPL+SL+QDQVQ++   GV++ + +S QDY SE   +  QL     +G +KLLY+TPEKL+ S  M+  L RLHN+GL+SRF++DEAHC+S WGHDFRPDY QL  LR D+P VP+MALTATA ++V +D +  LGMR+      SFNR NL YE+R K   V D IA++V Q+P DSG++YCLSRK+C+ +AEKL++K+              V +YHA+   +E+ + H+QWS G I+V+CATVAFGMGI+KPDVRYVIH+SMPK+LTH+YQESGRAGRDG  + C++F++++DK  LE M+            R ++DQLY+CV +  NE  CRR + LE+FG+ F R KC +TCDNC+       + R+ +  A+ I+ L  +      KG+  T+ QL  L+RG   K +  S     + G GAG  FKK + +++   M    +L E + E   +K G  F + Y   G KA  L  G  +F V +  K+ A +  A K
Sbjct:  434 GDDG--DTPRCPGHGLPCRLLTANTSANSGREFFKCSLPEG--ENCDFFQWKDGMEGNLNNNNFLEGSSTSSAG-GDVLNMREENRRVFGHRSFRKGQEDVIEKAIQGRDVFVLMPTGGGKSLCYQLPAWCCPGLAVVVSPLLSLIQDQVQSLLKNGVKSVFFSSAQDYHSEQVDINRQLNETTAHGGVKLLYLTPEKLSHSNQMQSILRRLHNKGLISRFIVDEAHCLSDWGHDFRPDYNQLGRLRRDYPGVPLMALTATASEKVVNDAVRALGMRNEYRYQSSFNRPNLRYEVRKKDGKVTDAIADIVAQRPNDSGVIYCLSRKNCEQLAEKLQKKLRE-----KGCRNVLVSFYHADLDPKEREHRHKQWSVGRINVLCATVAFGMGIDKPDVRYVIHYSMPKSLTHYYQESGRAGRDGEDAECVLFYSYKDKQVLEKMIRNGSDDKCNPSIRRKVDQLYKCVQYCENEFRCRRAMQLEFFGQKFDRAKCNQTCDNCK--AGRLPDERNMTAEAITIINLFNSASNQSRKGI--TMLQLAELYRGSKSKAITKSYPINVIEGFGAGSKFKKHDIDKITHGMIFQRILVENSVE---NKGG--FTSDYVALGEKAASLQRGSEKFIVEFPKKVTAPKARAEK 1058          
BLAST of mRNA_S-ischiensis_contig9.20570.1 vs. uniprot
Match: A0A7S4SBW1_9STRA (ATP-dependent DNA helicase n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SBW1_9STRA)

HSP 1 Score: 538 bits (1385), Expect = 2.010e-178
Identity = 274/538 (50.93%), Postives = 368/538 (68.40%), Query Frame = 0
Query:   17 PCLELTAGTERNAGRKFYCCSKPQGSEDRCNFFEWVDGDQGGGGGSFSXXXSPVVAVDPADQL-DTVDQLRKVFGHHRFRSGQKEVIMSAMAGKDVFVLMPTGGGKSLCYQLPAVCCPGLAVVFSPLISLVQDQVQAMTTIGVEAAYLNSEQDYQSEGRAVMDQLYHLPKYGSLKLLYITPEKLTRSPAMKRCLERLHNRGLLSRFVIDEAHCVSQWGHDFRPDYLQLNTLRGDFPDVPIMALTATADQRVRDDTIWRLGMRDPVVRTESFNRANLMYEIRPKTKHVVDEIAEVVLQKPEDSGIVYCLSRKDCQTVAEKLREKIASGPXXXXXXXRTRVDYYHAERTAQEKAYVHQQWSTGNIHVICATVAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGIRSRCLVFFAFRDKSRLESMVTRDKTIAWQHR---RGQLDQLYRCVSFLANEVECRRVLLLEYFGEHFPREKCGRTCDNCRDMVNYSSECRDCSGAAMEILRLSQAIQAK--GVRATLTQLVGLWRGETVK 548
            PC  +T  T  NAGR+FY CS P+G +  C+FF+W DG +G    S S        V  + +L D   + R+ FGH+ FR GQK+VI  AM G+DVFVLMPTGGGKSLCYQLPA CCPG+AVV SPL+SL+QDQVQ+MT +GVE+ +LNS QD++SE R ++ +L ++  +G +KLLYITPEKL  S  +K  + +L+NRG+LSRFV+DEAHC+S WGHDFRPDY QL  LR D+P+VP+MALTATA+++V  D I  L MR+  +   SFNR NL YE+R K    +D +A+ + ++  DSG++YCLSRKDC+TV++KL+EK+              V +YHAE    E+   H  W +G I V+CAT+AFGMGI+KPDVRYV+H+SMPK++TH+YQESGRAGRDG ++ C++F+++RDK  LE M+   KT   Q+    R ++DQLY C+ +  NE  CRR + LE+FGE F R  C +TCDNCR      ++  D +  A EI++L    QA+  G   TL QL  L++G   K
Sbjct:  195 PCRTVTVSTANNAGRQFYKCSMPEGKQ--CDFFQWADGMEGNLNDSMSGGMGGGDGVYGSGELKDIYAESRRKFGHNSFRPGQKKVIEKAMQGRDVFVLMPTGGGKSLCYQLPAWCCPGVAVVVSPLLSLIQDQVQSMTKLGVESVFLNSMQDFESEQRDILRRLDNVSSHGGIKLLYITPEKLRHSGMIKSVMTKLYNRGMLSRFVVDEAHCLSDWGHDFRPDYNQLGCLRSDYPNVPMMALTATANEKVVQDAIRALKMRNEHLYRSSFNRPNLAYEVRKKDSKSIDVMADYIAKRRNDSGVIYCLSRKDCETVSDKLQEKLREKGCSNIG-----VSFYHAELDPSERQRRHHMWGSGRISVLCATIAFGMGIDKPDVRYVMHYSMPKSITHYYQESGRAGRDGDKADCILFYSYRDKKILEMMIR--KTANNQNNQSTRRKIDQLYSCLRYCENEFLCRRTMQLEFFGEKFDRSLCNKTCDNCRQ--GKIADRHDLTDVAKEIIKLFLDTQAEKNGRGVTLVQLTDLFKGSKNK 721          
BLAST of mRNA_S-ischiensis_contig9.20570.1 vs. uniprot
Match: B8BWN4_THAPS (ATP-dependent DNA helicase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWN4_THAPS)

HSP 1 Score: 503 bits (1296), Expect = 3.430e-168
Identity = 263/527 (49.91%), Postives = 348/527 (66.03%), Query Frame = 0
Query:  106 MAGKDVFVLMPTGGGKSLCYQLPAVCCPGLAVVFSPLISLVQDQVQAMTTIGVEAAYLNSEQDYQSEGRAVMDQLYHLPKYGSLKLLYITPEKLTRSPAMKRCLERLHNRGLLSRFVIDEAHCVSQWGHDFRPDYLQLNTLRGDFPDVPIMALTATADQRVRDDTIWRLGMRDPVVRTESFNRANLMYEIRPKTKHVVDEIAEVVLQKPEDSGIVYCLSRKDCQTVAEKLREKIASGPXXXXXXXRTRVDYYHAERTAQEKAYVHQQWSTGNIHVICATVAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGIRSRCLVFFAFRDKSRLESMVTRDKTIAWQHRRGQ-----LDQLYRCVSFLANEVECRRVLLLEYFGEHFPREKCGRTCDNCRDMVNYSSECRDCSGAAMEILRLSQAIQAKGVRATLTQLVGLWRGETVKKLDSAGCRE-LRGAGAGRGFKKSEAERVGQQMACNWLLEEAAEETGTSKTGQNFLATYCKPGHKAGDLLSGKMEFKVVY 626
            M G+DVFVLMPTGGGKSLCYQLPA CCPGL+V+ SPL+SL++DQVQ+MT +GV + +LNS Q ++ E R ++D+L   P +G +KLLYITPEKL  S  +K  L  L N G +SRFV+DEAHC+S WGHDFRPDY QL  LR D+P+VP+MALTATA+++V  D I  LGMR+      SFNR NL YE+R K    VD IA+ + ++  DSG++YCLSRKDC+T+++KL  K+             RV YYHAE   +E+   H  WS G+I V+CAT+AFGMGI+KPDVRYV+H+SMPK++TH+YQESGRAGRDG  + C++F+A++DK  LE M+   +  A  ++R Q     +D LY C+ +  N  ECRR L L++FGE F + KC +TCDNCR  +    E RD + +A EIL+L   + ++G   TL QL  LWRG   K        E L G G G+   KSE + +   M    ++EE +EET    TG  F A Y  PG  A  + SG+ +F V +
Sbjct:    1 MKGRDVFVLMPTGGGKSLCYQLPAWCCPGLSVIISPLLSLIEDQVQSMTKLGVRSVFLNSAQSWEDEQRNIVDELRRTPIHGGIKLLYITPEKLAHSNMIKGVLSNLANNGRISRFVVDEAHCLSDWGHDFRPDYNQLGCLRRDYPNVPLMALTATANKKVVSDAIRALGMRNEYSYRSSFNRPNLHYEVRRKDNKTVDTIADYIAERRNDSGVIYCLSRKDCETLSDKLNNKLREKGFRD-----VRVSYYHAELDQRERHQRHHAWSLGHISVLCATIAFGMGIDKPDVRYVMHYSMPKSITHYYQESGRAGRDGGNADCILFYAYKDKKTLEMMI---RKAAGHNQRSQATLRKIDHLYTCLRYCENTFECRRTLQLQFFGEMFEKHKCNKTCDNCR--LGLVEEKRDMTNSAREILQL---LDSRGRGVTLHQLAELWRGTKSKAHTKFLITENLNGYGKGKAVSKSETDALVHAMVFEGVIEELSEET----TG-GFAADYVHPGKNAALVQSGRQQFFVSF 509          
BLAST of mRNA_S-ischiensis_contig9.20570.1 vs. uniprot
Match: B7FSW6_PHATC (ATP-dependent DNA helicase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FSW6_PHATC)

HSP 1 Score: 498 bits (1281), Expect = 3.850e-166
Identity = 248/500 (49.60%), Postives = 350/500 (70.00%), Query Frame = 0
Query:   82 VDQLRKVFGHHRFRSGQKEVIMSAMAGKDVFVLMPTGGGKSLCYQLPAVCCPGLAVVFSPLISLVQDQVQAMTTIGVEAAYLNSEQDYQSEGRAVMDQLYHLPKYGSLKLLYITPEKLTRSPAMKRCLERLHNRGLLSRFVIDEAHCVSQWGHDFRPDYLQLNTLRGDFPDVPIMALTATADQRVRDDTIWRLGMRDPVVRTESFNRANLMYEIRPKTKHVVDEIAEVVLQKPEDSGIVYCLSRKDCQTVAEKLREKIASGPXXXXXXXRTRVDYYHAERTAQEKAYVHQQWSTGNIHVICATVAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGIRSRCLVFFAFRDKSRLESMVTRD-KTIAWQHRRGQLDQLYRCVSFLANEVECRRVLLLEYFGEHFPREKCGRTCDNCRDMVNYSSECRDCSGAAMEILRLSQAI-QAKGVRATLTQLVGLWRGE----TVKKLDSAGCRELRGAGAGRGFKKSEAERV 575
            V + R+ FGH  FR+GQ+++I +A+ G D+FVLMPTGGGKSLCYQLPA CCPGLAVV SPL+SL+QDQVQA+T +G+EA +L S QDYQ+E   +  +L     +G +KLLYITPEKL  S  ++  + RL N+ L+SRFV+DEAHC+S WGHDFRPDY++L+++R ++P+VP+MALTATA+++V +D I  LGM++      SFNR+NL YE+R K    ++ IA+ +  +P++SG+VYCLSRKDC+  ++KL+E     P       R R+ +YHA+    E+   H++WS G + V+CATVAFGMGI+KPDVRYVIH+SMPK++TH+YQESGRAGRDG  + C++++ ++DK  LE+++T+  K    Q  R Q+DQLY CV +  +   CRR + LE+FGEHF R KC +TCDNC+     + + RD +  A  I+ L   + + K    TL Q+  L+RG      VK +D    ++L G GAGR +KK E +++
Sbjct:    2 VAENRRKFGHQEFRAGQQKIIKNAIQGCDIFVLMPTGGGKSLCYQLPAWCCPGLAVVISPLLSLIQDQVQALTQLGIEAVFLASTQDYQTEQMDITRRLNETTAHGGVKLLYITPEKLNNSTMIQNIIRRLCNKNLISRFVVDEAHCLSDWGHDFRPDYMRLDSVRREYPNVPLMALTATANEKVVNDAIRALGMKNEYRYQSSFNRSNLHYEVRKKDGQTLEVIADYIASRPKESGVVYCLSRKDCEKTSQKLQEIARQRPGCN----RIRISFYHADLDPHEREQRHREWSNGGVSVLCATVAFGMGIDKPDVRYVIHYSMPKSITHYYQESGRAGRDGDDADCILYYHYKDKKILENLITKSSKNPHSQTTRRQIDQLYGCVQYCEDLFRCRRTMQLEFFGEHFERGKCNKTCDNCK--AGRTPDRRDLTEDAKTIINLHTDVSKQKRNGTTLHQITELFRGSKSQAAVKFID---VKKLPGYGAGRNYKKFEIDKI 492          
BLAST of mRNA_S-ischiensis_contig9.20570.1 vs. uniprot
Match: A0A1E7EUD2_9STRA (DNA helicase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUD2_9STRA)

HSP 1 Score: 518 bits (1335), Expect = 2.660e-165
Identity = 288/633 (45.50%), Postives = 389/633 (61.45%), Query Frame = 0
Query:   17 PCLELTAGTERNAGRKFYCCSKPQGSEDRCNFFEWVDGDQGGGGGS----------FSXXXSPVVAVDPADQLDTVDQLRKVFGHHRFRSGQKEVIMSAMAGKDVFVLMPTGGGKSLCYQLPAVCCPGLAVVFSPLISLVQDQVQAMTTIGVEAAYLNSEQDYQSEGRAVMDQLYHLPKYGSLKLLYITPEKLTRSPAMKRCLERLHNRGLLSRFVIDEAHCVSQWGHDFRPDYLQLNTLRGDFPDVPIMALTATADQRVRDDTIWRLGMRDPVVRTESFNRANLMYEIRPKTKHVVDEIAEVVLQKPEDSGIVYCLSRKDCQTVAEKLREKIASGPXXXXXXXRTRVDYYHAERTAQEKAYVHQQWSTGNIHVICATVAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGIRSRCLVFFAFRDKSRLESMVTRDKTIAWQHR-RGQLDQLYRCVSFLANEVECRRVLLLEYFGEHFPREKCGRTCDNCRDMVNYSSECRDCSGAAMEILRLSQAIQAKGVRA---TLTQLVGLWRGETVKKLDSAGCRE-LRGAGAGRGFKKSEAERVGQQMACNWLL-EEAAEETGTSKTGQNFLATYCKPGHKAGDLLSGKMEFKVVYRTKLKAS 633
            PC   TA T  N GR+F+ CS P+G    C+FF+W DGD      +            XXX         + LD  ++ ++VFGH  FR GQ+ VI  A+ GKDVFVLMPTGGGKSLCYQLPA CCPGLAVV SPL+SL+QDQVQ++T  GV++ + +S QDYQ+E   +  QL     +G +KLLY+TPEKL  S  M+  L RL+N+GL+SRFV+DEAHC+S WGHDFRPDY QL  LR D+P VP+MALTATA+++V +D I  LGM                  +R K   V+D IA+++  +P+DSG++YCLSRK+C+ VAEKLR K+              V YYHAE   QE+   H+QWS+G I+V+CATVAFGMGI+KPDVRYVIH+SMPK++TH+YQESGRAGRDG  + C++F++++DK  LE M+       +    + ++DQLY C+++  ++  CRR + LE+FGE F R KC +TCDNC+      ++ RD +  A+ I+ L  +   K       T+ QL  L+RG   K +        L G GAG  +KK E ER+  +M  + +L E + E TG       F + Y   G  A  L +G   F V +  K+ A+
Sbjct:  405 PCRVFTANTSTNMGRQFFKCSLPEGQN--CDFFQWKDGDVEENNWNDXXXXXXXXXXXXXXXXXXXTSGGNILDMYEENQRVFGHRTFRKGQQLVIEKAIQGKDVFVLMPTGGGKSLCYQLPAWCCPGLAVVISPLLSLIQDQVQSLTKYGVKSVFFSSHQDYQTEQVDINRQLNQTTAHGGVKLLYLTPEKLRHSNQMQSILRRLYNKGLISRFVVDEAHCLSDWGHDFRPDYNQLGVLRKDYPGVPLMALTATANKKVVNDAIGALGM------------------LRKKDGKVIDAIADLIASRPKDSGVIYCLSRKNCEQVAEKLRGKLREKKCGHVG-----VSYYHAELDPQERERRHKQWSSGRINVLCATVAFGMGIDKPDVRYVIHYSMPKSITHYYQESGRAGRDGDNADCILFYSYKDKQVLEKMIRSGNGGRYSPSIQRKIDQLYGCLNYCEDDFRCRRTMQLEFFGETFDRAKCNKTCDNCK--AGRLADNRDMTKEAISIINLFNSASRKKRNTSGITMLQLTDLYRGSKSKAITKNYTTSGLEGYGAGSKYKKDEVERITHKMIFDRILIENSVENTG------GFTSDYVSLGDAAPPLQNGSKRFFVEFPQKVVAA 1004          
BLAST of mRNA_S-ischiensis_contig9.20570.1 vs. uniprot
Match: A0A4D9D6D9_9STRA (DNA helicase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6D9_9STRA)

HSP 1 Score: 509 bits (1312), Expect = 6.280e-160
Identity = 285/619 (46.04%), Postives = 373/619 (60.26%), Query Frame = 0
Query:   10 PQCECGLPCLELTAGTERNAGRKFYCCSKPQGSEDRCNFFEWVDGDQGGGGGSFSXXXS-PVVAVDPADQLDTVDQLR---KVFGHHRFRSGQKEVIMSAMAGKDVFVLMPTGGGKSLCYQLPAVCCPGLAVVFSPLISLVQDQVQAMTTIGVEAAYLNSEQDYQSEGRAVMDQLYHLPKYGSLKLLYITPEKLTRSPAMKRCLERLHNRGLLSRFVIDEAHCVSQWGHDFRPDYLQLNTLRGDFPDVPIMALTATADQRVRDDTIWRLGMRDPVVRTESFNRANLMYEIRPKTKH------VVDEIAEVVLQK-PEDSGIVYCLSRKDCQTVAEKLREKIASGPXXXXXXXRTRVDYYHAERTAQEKAYVHQQWSTGNIHVICATVAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGIRSRCLVFFAFRDKSRLESMVTRDKTIAWQHRRGQLDQLYRCVSFLANEVECRRVLLLEYFGEHFPREKCGRTCDNCRDMVNYSSECRDCSGAAMEILRLSQAIQAKGVRATLTQLVGLWRGETVKKLDSAGCRELRGAGAGRGFKKSEAERVGQQMACNWLLEEAAEETGTSKTGQNFLATYCKPGHKAGDLLS 617
            P  +CG P     A T+ NAGRKF+ C            F W D + G  GG +    S P+    P   +   D  +   ++FGH  FR GQ++V+ +A++ +DVFVLMPTGGGKSLCYQLPA   PG+ VVFSPL+SL+QDQV+ +   GV+AA L S QDY++EGR +MD+LYHLP +GSLKLLYITPEK  RS AM +CL+RL +RGLL+RFVIDEAHC+SQWGHDFRPDYL L ++R  FP +PIMALTATA+QR+ +D +  L M+ P +  +SFNR NL Y+IRPK+K        +DEIAE V +K P  SGIVYCLSRKD + +A  L EK            R RV YYHA+   +E+   H++WS G + VI ATVAFGMGINKPDVRYVIH S+PK+LTH+YQESGRAGRDG+ + C ++++F+                                     V+CRR L+++YFGE F   +C RTCDNCR+    + +  D +  A  ++RL  ++   G++ TL QL  L RGE +      G  +    G G    K + ER+ QQM     L E   E         F A Y + G +A  L++
Sbjct:  407 PCSKCGKPLEARVARTDTNAGRKFWKCFDCDAD------FRWDDEEGGERGGDYGERASFPIHHELPVHNISMQDAAQCNHRIFGHRSFRLGQEKVVEAALSLRDVFVLMPTGGGKSLCYQLPACLTPGITVVFSPLLSLIQDQVEGLRENGVDAAQLTSHQDYETEGREIMDRLYHLPAHGSLKLLYITPEKFARSDAMVKCLQRLKDRGLLARFVIDEAHCISQWGHDFRPDYLMLRSIRDKFPSIPIMALTATANQRLLEDAVKLLKMQSPYIHQQSFNRPNLTYDIRPKSKASPAFLGAIDEIAEYVKKKGPRSSGIVYCLSRKDTERIATALAEKT-----------RLRVGYYHADMPPKERERAHREWSQGRMPVIAATVAFGMGINKPDVRYVIHFSLPKSLTHYYQESGRAGRDGLPAECRMYYSFK-------------------------------------VDCRRTLIMQYFGEAFDPSRCKRTCDNCRNEA--AVQALDLTELAKNVIRLVDSMA--GMQFTLCQLASLVRGENLAWARKTGADKEELFGCGSQHSKGDVERLTQQMVLQHFLAEEMVELANG-----FPANYVQLGVEAEALMN 962          
BLAST of mRNA_S-ischiensis_contig9.20570.1 vs. uniprot
Match: A0A0P1A6Z6_PLAHL (DNA helicase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6Z6_PLAHL)

HSP 1 Score: 501 bits (1289), Expect = 2.350e-158
Identity = 274/639 (42.88%), Postives = 383/639 (59.94%), Query Frame = 0
Query:   10 PQCECGLPCLELTAGTERNAGRKFYCCSKPQGSEDRCNFFEWVDGDQGGGGGSFSXXXS---------PVVAVDP---ADQLDTVDQLRKVFGHHRFRSGQKEVIMSAMAGKDVFVLMPTGGGKSLCYQLPAVCCPGLAVVFSPLISLVQDQVQAMTTIGVEAAYLNSEQDYQSEGRAVMDQLYHLPKYGSLKLLYITPEKLTRSPAMKRCLERLHNRGLLSRFVIDEAHCVSQWGHDFRPDYLQLNTLRGDFPDVPIMALTATADQRVRDDTIWRLGMRDPVVRTESFNRANLMYEIRPKTKHVVDEIAEVVLQKPEDSGIVYCLSRKDCQTVAEKLREKIASGPXXXXXXXRTRVDYYHAERTAQEKAYVHQQWSTGNIHVICATVAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGIRSRCLVFFAFRDKSRLESMVTRDKTIAWQHRRGQLDQLYRCVSFLANEVECRRVLLLEYFGEHFPREKCGRTCDNCRDM-VNYSSECRDCSGAAMEILRLSQAIQAKGVRATLTQLVGLWRGETVKKLD--SAGCRELRGAGAGRG-FKKSEAERVGQQMACNWLLEEAAEETGTSKTGQNFLATYCKPGHKAGDLLSGKMEFKVVYRTKLKA 632
            P C CG+  +E       NA R +Y CS        C FF WVD     GG S +   +         P V+ DP   A        LR VFGH+ FR  Q+  +M A +G+DVFVLMPTGGGKSLC+QLPA    G+ +V SPL+SL+QDQVQ +  + V  A L  +QDY +E R ++ +L+    +  +K+LY+TPEK+  S  +    E L  RGLL+RFVIDEAHC+SQWGHDFR DYL L TLR  F  VPIMALTATA+ +   D +  L +R+P V   SFNR NL Y++R KT   ++EIA+ V +  +DSGI+YCLS+KDC+  AEKL + +             ++ +YHA    +++AY H +WS G+I +ICATVAFGMGINKPDVRYVIHH++P+++TH+YQE+GRAGRDG  + C+++++F D +R   ++T+D+    QHR   L  L R   F  N+VECRR  LLEYFGEHF  E+C  TCDNC++  +  + E  D +   + ++++ + ++      TL Q+  ++ G  VK  +       +L G G G+G + +SEAER+   M     L    E+  T+  G  F  T+  PG  A  L+ G+   ++V +TK +A
Sbjct:  346 PTCSCGMLTVEARVQHGANANRLYYRCST-------CGFFSWVDSTLSSGGDSSTVLNNETCVRVIDKPCVSNDPSVNAKMQRAKRLLRDVFGHNSFRPNQERTVMEAFSGRDVFVLMPTGGGKSLCFQLPACIDDGVTIVISPLVSLIQDQVQQLEALDVGVANLKGDQDYATEQRPIITELFS--NHSRIKMLYVTPEKIASSNMLNNLFESLEKRGLLARFVIDEAHCISQWGHDFRKDYLNLGTLRAKFSSVPIMALTATANTQTEADIVKNLKLRNPFVTRSSFNRPNLTYDVRRKTSKFMNEIADYVRKHIDDSGIIYCLSKKDCEQTAEKLIKALG----FEQTRKANQISFYHAGLEPEDRAYRHHEWSKGSIKLICATVAFGMGINKPDVRYVIHHTIPQSVTHYYQEAGRAGRDGEVANCILYYSFMDLTRRRKLITKDRDNI-QHRNVHLQNLRRMTQFCENQVECRRTSLLEYFGEHFLDEQCHGTCDNCKNKALGITFEKTDVTDDCLALVKMVKTLEESNDPTTLVQIAHIYLGMVVKGREWKQYQMAQLEGFGKGKGRYSRSEAERILYHMILRQYL---CEKDQTNVKG--FTTTFLSPGQNANRLMRGE-RVRIVCKTKYQA 964          
BLAST of mRNA_S-ischiensis_contig9.20570.1 vs. uniprot
Match: A0A6H5L064_9PHAE (DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L064_9PHAE)

HSP 1 Score: 471 bits (1213), Expect = 4.110e-158
Identity = 247/386 (63.99%), Postives = 279/386 (72.28%), Query Frame = 0
Query:   55 DQGGGGGSFSXXXSPVVAVDPADQLDTVDQLRKVFGHHRFRSGQKEVIMSAMAGKDVFVLMPTGGGKSLCYQLPAVCCPGLAVVFSPLISLVQDQVQAMTTIGVEAAYLNSEQDYQSEGRAVMDQLYHLPKYGSLKLLYITPEKLTRSPAMKRCLERLHNRGLLSRFVIDEAHCVSQWGHDFRPDYLQLNTLRGDFPDVPIMALTATADQRVRDDTIWRLGMRDPVVRTESFNRANLMYEIRPKTKHVVDEIAEVVLQKPEDSGIVYCLSRKDCQTVAEKLREKIASGPXXXXXXXRTRVDYYHAERTAQEKAYVHQQWSTGNIHVICATVAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGIRSRCLVFFAFRDKSRLE 440
            DQG GG   S        V    QLD   ++  +FGH +FR+GQ+EVI+ AM GKDVFVLMPTGGGKSLCYQLPA CCPGLAVVFSPLISLVQDQV                       R VMDQLY L  YG LKLLYITPEK  RSP+M + L+RLH++GLLSRFVIDEAHCVS WGHDFRPDYL+L  LR DFPDVPIMALTATA+  VRDDTI RL +R+P VRTESFNR NL YEIRPK   V+DEIA+V+   P  SGIV          + +KL E             R RVD+YHA+RTA EKA VH++WS G IH+ICAT+AFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDG+ S+C+VFFA+RDK+RLE
Sbjct:    8 DQGNGGNRPSGGGGLPGGVANGKQLDIRKEVSDIFGHAKFRTGQEEVIVDAMKGKDVFVLMPTGGGKSLCYQLPACCCPGLAVVFSPLISLVQDQV-----------------------RVVMDQLYRLQDYGGLKLLYITPEKFCRSPSMNKALQRLHSKGLLSRFVIDEAHCVSDWGHDFRPDYLKLGILRKDFPDVPIMALTATANTVVRDDTIRRLQLRNPTVRTESFNRPNLKYEIRPKKAGVLDEIAKVMQSFPGQSGIV-------ASGLLKKLSETTGG------HRGRFRVDFYHADRTAAEKARVHREWSAGRIHLICATIAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGLDSKCIVFFAYRDKARLE 357          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20570.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR28_ECTSI4.440e-25262.73DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A836CQM3_9STRA1.900e-20052.28DNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S4EMT8_9STRA9.880e-18047.20DNA helicase n=1 Tax=Pseudo-nitzschia australis Ta... [more]
A0A7S4SBW1_9STRA2.010e-17850.93ATP-dependent DNA helicase n=3 Tax=Ditylum brightw... [more]
B8BWN4_THAPS3.430e-16849.91ATP-dependent DNA helicase (Fragment) n=1 Tax=Thal... [more]
B7FSW6_PHATC3.850e-16649.60ATP-dependent DNA helicase (Fragment) n=1 Tax=Phae... [more]
A0A1E7EUD2_9STRA2.660e-16545.50DNA helicase n=1 Tax=Fragilariopsis cylindrus CCMP... [more]
A0A4D9D6D9_9STRA6.280e-16046.04DNA helicase n=1 Tax=Nannochloropsis salina CCMP17... [more]
A0A0P1A6Z6_PLAHL2.350e-15842.88DNA helicase n=1 Tax=Plasmopara halstedii TaxID=47... [more]
A0A6H5L064_9PHAE4.110e-15863.99DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 90..296
e-value: 1.2E-25
score: 101.3
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 102..280
score: 20.971
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 329..422
e-value: 5.0E-20
score: 82.5
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 308..421
e-value: 1.1E-13
score: 51.4
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 302..462
score: 17.455
IPR032284ATP-dependent DNA helicase RecQ, zinc-binding domainPFAMPF16124RecQ_Zn_bindcoord: 434..500
e-value: 6.3E-15
score: 55.7
NoneNo IPR availableGENE3D3.40.50.300coord: 288..431
e-value: 3.5E-37
score: 129.1
NoneNo IPR availableGENE3D3.40.50.300coord: 73..287
e-value: 1.5E-81
score: 274.9
NoneNo IPR availablePANTHERPTHR13710:SF128ATP-DEPENDENT DNA HELICASE Q-LIKE 4Acoord: 84..670
NoneNo IPR availablePANTHERPTHR13710DNA HELICASE RECQ FAMILY MEMBERcoord: 84..670
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 97..266
e-value: 1.6E-18
score: 67.1
IPR018982RQC domainPFAMPF09382RQCcoord: 508..629
e-value: 1.5E-7
score: 31.2
IPR010666Zinc finger, GRF-typePFAMPF06839zf-GRFcoord: 10..53
e-value: 4.1E-12
score: 46.0
IPR004589DNA helicase, ATP-dependent, RecQ typeTIGRFAMTIGR00614TIGR00614coord: 85..559
e-value: 1.4E-150
score: 500.1
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 432..633
e-value: 1.6E-32
score: 114.6
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved sitePROSITEPS00690DEAH_ATP_HELICASEcoord: 219..228
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 134..439

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:1466089..1484793 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20570.1mRNA_S-ischiensis_contig9.20570.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 1466089..1484795 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20570.1 ID=prot_S-ischiensis_contig9.20570.1|Name=mRNA_S-ischiensis_contig9.20570.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=758bp
QGDGGCSDGPQCECGLPCLELTAGTERNAGRKFYCCSKPQGSEDRCNFFE
WVDGDQGGGGGSFSGGGSPVVAVDPADQLDTVDQLRKVFGHHRFRSGQKE
VIMSAMAGKDVFVLMPTGGGKSLCYQLPAVCCPGLAVVFSPLISLVQDQV
QAMTTIGVEAAYLNSEQDYQSEGRAVMDQLYHLPKYGSLKLLYITPEKLT
RSPAMKRCLERLHNRGLLSRFVIDEAHCVSQWGHDFRPDYLQLNTLRGDF
PDVPIMALTATADQRVRDDTIWRLGMRDPVVRTESFNRANLMYEIRPKTK
HVVDEIAEVVLQKPEDSGIVYCLSRKDCQTVAEKLREKIASGPGPGRGRQ
RTRVDYYHAERTAQEKAYVHQQWSTGNIHVICATVAFGMGINKPDVRYVI
HHSMPKTLTHFYQESGRAGRDGIRSRCLVFFAFRDKSRLESMVTRDKTIA
WQHRRGQLDQLYRCVSFLANEVECRRVLLLEYFGEHFPREKCGRTCDNCR
DMVNYSSECRDCSGAAMEILRLSQAIQAKGVRATLTQLVGLWRGETVKKL
DSAGCRELRGAGAGRGFKKSEAERVGQQMACNWLLEEAAEETGTSKTGQN
FLATYCKPGHKAGDLLSGKMEFKVVYRTKLKASEVAARKKASAGGGGKSK
GKATTPSSSGKKQPRQSKDKATTPSSSGKKQPRQRRSGGDGSSGSRASKA
TAGTGTAGKARPAAATGANAGRRSGASAGLGGAEQAIVVADDDDGDEEEE
EWHAPVLG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
IPR032284RecQ_Zn-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR018982RQC_domain
IPR010666Znf_GRF
IPR004589DNA_helicase_ATP-dep_RecQ
IPR036388WH-like_DNA-bd_sf
IPR002464DNA/RNA_helicase_DEAH_CS
IPR027417P-loop_NTPase