prot_S-ischiensis_contig9.20536.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20536.1
Unique Nameprot_S-ischiensis_contig9.20536.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length383
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20536.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1070.10coord: 36..310
e-value: 4.3E-10
score: 41.3
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..67
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 139..157
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 181..199
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 68..87
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 223..263
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 314..383
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 284..288
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..138
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 289..313
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..21
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 200..222
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 106..116
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 88..105
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 264..283
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 158..180
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableTMHMMTMhelixcoord: 84..106
NoneNo IPR availableTMHMMTMhelixcoord: 116..138
NoneNo IPR availableTMHMMTMhelixcoord: 49..71
NoneNo IPR availableTMHMMTMhelixcoord: 158..180
NoneNo IPR availableTMHMMTMhelixcoord: 200..222
NoneNo IPR availableTMHMMTMhelixcoord: 264..281
NoneNo IPR availableTMHMMTMhelixcoord: 291..313

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:1179094..1191349 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20536.1mRNA_S-ischiensis_contig9.20536.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 1179093..1191349 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20536.1 ID=prot_S-ischiensis_contig9.20536.1|Name=mRNA_S-ischiensis_contig9.20536.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=383bp
LYRGSSIAAAGAAAVSRRAAAGPAQQLPANIMTFVTDWGAESSYRAYTVV
AATGAISIAAAVSALSWSLVRQRYGMTVDAHTHLARRLLVLDLLFSAAVL
MNPGLLGGKQYCQAQAFLLFVLGNCLVVWHGVIGVVLWKWAVTREDAARY
DRRRIGRYLLWTLGPVCLAGAAVLATFPVGHGEVACFPFREEGSGPGYTA
LYVLLVQAPIVVVWVLDIAVYLSVTIHFRDRLGEMAAEGYSGDDEDVREY
TQAARSVKRKMSHYIIGFTLVNLSVILTIGAHLDIESRLLDFVVLVIVSL
RGFIDACIWGGLFEGEKITWVGRQCGCAGRCTEGLLRMLEQCSRWPLFHC
CCYCCIGTETAMELSHRTQKLLPYRGKLHLPER
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