prot_S-ischiensis_contig9.20465.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20465.1
Unique Nameprot_S-ischiensis_contig9.20465.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length240
Homology
BLAST of mRNA_S-ischiensis_contig9.20465.1 vs. uniprot
Match: A0A6H5JA70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA70_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 2.630e-52
Identity = 101/203 (49.75%), Postives = 139/203 (68.47%), Query Frame = 0
Query:   44 STAVVSRAELLRQ-------AGIAAVAVATGTGVAAHPALASATLASYKRQYFRYVPRLQESMAWYQGELQKAVLNGDWAAVLAFFDVVNTANEDSKRPEMYQGRSSRMQRELYDPMTIWAQSFAEKGSSPKVRKLLEQERGLEVAMESLVATAAEEAKGSGRGGGSAAAKQAWETGRDSIKRYVEIANDGLIRQLNKVDTPF 239
            S++  SR+E+LR+       AG+ ++A A G+ +   PALA   LA+ K+ YFRYVPR+ ++MAWY+G+LQ+A+   DW  VLA+F+VVNTA  DS RP MYQ  SSRMQREL+ P+++WAQS + KG+  ++R LL QE  LE AM SL   A+ +    G   G AA   AWE GRD+++ YVE+AN G++R L K+DTPF
Sbjct:   54 SSSSSSRSEVLRELGRYAAGAGVLSLAGACGSPL---PALADNALAATKKSYFRYVPRILDAMAWYEGDLQQAIAEEDWPKVLAYFEVVNTARSDSSRPAMYQSSSSRMQRELFSPLSVWAQSMSIKGTG-QLRALLSQEEKLEQAMASLEKAASGKGLKEGESQGQAAIA-AWEAGRDALQEYVEVANKGMVRSLRKIDTPF 251          
BLAST of mRNA_S-ischiensis_contig9.20465.1 vs. uniprot
Match: D8LLR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLR8_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 2.500e-45
Identity = 79/141 (56.03%), Postives = 101/141 (71.63%), Query Frame = 0
Query:   99 MAWYQGELQKAVLNGDWAAVLAFFDVVNTANEDSKRPEMYQGRSSRMQRELYDPMTIWAQSFAEKGSSPKVRKLLEQERGLEVAMESLVATAAEEAKGSGRGGGSAAAKQAWETGRDSIKRYVEIANDGLIRQLNKVDTPF 239
            MAWY+G+LQKA+   DW  VLA+F+VVNTA  DS RP MYQ  SSRMQREL+ P+++WAQS + KG+  K+R LL QE  LE AM SL   A+ ++   G   G AA K AWE GRD+++ YVE+AN G++R L K+DTPF
Sbjct:    1 MAWYEGDLQKAIAEEDWPKVLAYFEVVNTARSDSSRPAMYQSSSSRMQRELFSPLSVWAQSMSIKGTGAKLRALLSQEEKLEQAMASLEKAASGKSLKEGESQGQAA-KAAWEAGRDALQEYVEVANKGMVRSLRKIDTPF 140          
BLAST of mRNA_S-ischiensis_contig9.20465.1 vs. uniprot
Match: A0A7S3Y028_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y028_HETAK)

HSP 1 Score: 114 bits (284), Expect = 2.930e-27
Identity = 81/218 (37.16%), Postives = 113/218 (51.83%), Query Frame = 0
Query:   38 GQATRPSTAVVSRAELLRQAGIAAVAVATGTGVAAHPALASATLASYKRQYFRYVPRLQESMAWYQGELQKAVLNGDWAAVLAFF--DVVNTANEDSKRPEMYQGRSSRMQRELYDPMTIWAQSFAEKGSSPKVRKLLEQERGLEVAMESLVATAAEEAKGSGRGGG-----------------SAAAKQAWETGRDSIKRYVEIANDGLIRQLNKVD 236
            G +    T VVSR + L  AG+AA    TG  +A H  LA  +L + K+ YFRYVPRL +  ++Y  +L+KA+ + DW AV   F  +V+         P      +S+  R+L  PMTIW+ +FAEKG S K   L EQE+ LE A+  +   A  +      GGG                    A ++WE GR +I  Y+EIAN GL R+LNK++
Sbjct:   28 GSSMGEKTVVVSRRDFLAGAGVAA----TGLVLAPHSVLADMSLPAAKQLYFRYVPRLNDGKSFYANDLKKAIDDQDWEAVKKTFVKEVIVQPTSKKYNPPA----TSKWDRDLTTPMTIWSSTFAEKGVSKKTTALQEQEQLLETALAKIERVAGGDLTALPTGGGFLGFGTKSEDTNKGKSQKQIALESWEEGRTAINTYIEIANFGLSRELNKLE 237          
BLAST of mRNA_S-ischiensis_contig9.20465.1 vs. uniprot
Match: A0A5J4Z2T5_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2T5_PORPP)

HSP 1 Score: 103 bits (256), Expect = 4.430e-23
Identity = 78/195 (40.00%), Postives = 103/195 (52.82%), Query Frame = 0
Query:   48 VSRAELLRQAGIAAVAVATGTGVAAHPALASATLASYKRQYFRYVPRLQESMAWYQGELQKAVLNGDWAAVLAFFDVVNTANEDSKRPEMYQGRS-SRMQRELYDPMTIWAQSFAEKGSSPKVRKLLEQERGLEVAMESLVATA-AEEAKGSGRGGGSA---AAKQAWETGRDSIKRYVEIANDGLIRQLNKVDT 237
            VSR  LL   G  A A      V+   ALA   L + KR YFRY  R +  + W+  +L  AV    W AVL  F   + A ++SK+ E    R  S MQR L+DP+TIWAQSFAEKG+ P  R L  QE+  E  M+ L   A  ++   S +  G +   AA  AW  GRD+I  Y+  AN  L R+L ++D+
Sbjct:   30 VSRRALL--GGCVAAAXXXXXAVSPPEALADRDLMTAKRSYFRYATRAESGIDWFVTDLYPAVQEQKWDAVLDAFAPRSDARDNSKKAEYGIDRKVSNMQRFLFDPLTIWAQSFAEKGTGPNFRYLASQEKEFEEQMDRLRRIAKGDKLDFSKQNAGLSRQDAALDAWNKGRDAINLYLARANANLSRELRRLDS 222          
BLAST of mRNA_S-ischiensis_contig9.20465.1 vs. uniprot
Match: A0A7S0XTY6_HEMAN (Hypothetical protein n=3 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XTY6_HEMAN)

HSP 1 Score: 103 bits (256), Expect = 8.300e-23
Identity = 63/167 (37.72%), Postives = 97/167 (58.08%), Query Frame = 0
Query:   70 VAAHPALASATLASYKRQYFRYVPRLQESMAWYQGELQKAVLNGDWAAVLAFFDVVNTANEDSKRPEM-YQGRSSRMQRELYDPMTIWAQSFAEKGSSPKVRKLLEQERGLEVAMESLVATAAEEAKGSGRGGGSAAAKQAWETGRDSIKRYVEIANDGLIRQLNKV 235
            +A  PA A  TL S KR YFRYVPR++     Y  +L++A+ + DW AV   F  V+ A E+S +  +    + S+++ EL +PM +W  SFAEKG+SPK RK+  +   L  A++ + A AA+  K         AA Q+WE G+ ++  Y++ AN GL  Q+ ++
Sbjct:   85 LAVQPANADMTLTSMKRAYFRYVPRIEVGRDLYVLKLREAIESEDWKAVDDIFVQVSAAQEESSKAALGLDAKLSKIENELLNPMQVWITSFAEKGTSPKQRKMDAKLASLRAALDGVQAAAAKRDKD--------AAIQSWEDGKIALNGYIKTANKGLTLQVRQL 243          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20465.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JA70_9PHAE2.630e-5249.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLR8_ECTSI2.500e-4556.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3Y028_HETAK2.930e-2737.16Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A5J4Z2T5_PORPP4.430e-2340.00Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S0XTY6_HEMAN8.300e-2337.72Hypothetical protein n=3 Tax=Hemiselmis andersenii... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..239
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.779
NoneNo IPR availableTMHMMTMhelixcoord: 59..81
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:586341..593966 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20465.1mRNA_S-ischiensis_contig9.20465.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 586064..593986 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20465.1 ID=prot_S-ischiensis_contig9.20465.1|Name=mRNA_S-ischiensis_contig9.20465.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=240bp
MMGLKSAAVVGLAGLLCSGAYAFAPVNAAGNIAMKMGGQATRPSTAVVSR
AELLRQAGIAAVAVATGTGVAAHPALASATLASYKRQYFRYVPRLQESMA
WYQGELQKAVLNGDWAAVLAFFDVVNTANEDSKRPEMYQGRSSRMQRELY
DPMTIWAQSFAEKGSSPKVRKLLEQERGLEVAMESLVATAAEEAKGSGRG
GGSAAAKQAWETGRDSIKRYVEIANDGLIRQLNKVDTPF*
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