prot_S-ischiensis_contig9.20419.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20419.1
Unique Nameprot_S-ischiensis_contig9.20419.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length422
Homology
BLAST of mRNA_S-ischiensis_contig9.20419.1 vs. uniprot
Match: A0A6H5KAT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAT8_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 5.440e-25
Identity = 79/270 (29.26%), Postives = 127/270 (47.04%), Query Frame = 0
Query:  137 ETPRERGFAREEASPGREGHLEFLSQFTNGVHQALLDVGGLGQTWPAAVDLHDAPLHEAIMALDDYGASDGQVRFLDHAYSCALRAFCQSRDTGVRLNACRVAIAAGYNLHSRTRSPWAGKEFVARGTLRNIIRGLSPLWQESATSSAGGGGRREASWADAASADMGTGTEVVDTMVFLLDAICSVLLLPPRGVHILGHLEAADKRLFPALGGFYARRREASVALPGVRTAALALLLQGWKLSDLVRVSERLGVNVDACQDKEDMARALV 406
            E  R+    RE     R  ++ F + FT G+  A   +  +           +APL EA MAL ++ AS G VRFL+ A+S A+ A  Q     V+LNA  +A++AGY   S+   P   K+F   GTL N++   +P W + + +S   G +                     T+ FLL+ +  VL+LPP    +L +L   D+R+ PA     +   E     P V  A +  +L+   + DL  +++ +GV+V++C   E M + L+
Sbjct:   13 EVKRDLASVRESVEDCRAENMVFFASFTAGLEAARQGIELMRV---------NAPLEEAQMALKNFEASKGNVRFLETAHSKAMTALVQGHTLDVKLNAAVIAVSAGYVHMSKVDCPSEAKDFTVNGTLANVVSHFAPTWSDPSCASTADGKK---------------------TVSFLLNIVSCVLVLPPESASVLSNL---DERILPAFCALCSAEPELRCMYPKVAGAVVGAMLEQKTMRDLFHLADMVGVDVESCTSHEAMVQVLL 249          
BLAST of mRNA_S-ischiensis_contig9.20419.1 vs. uniprot
Match: A0A6H5K720_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K720_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 3.830e-24
Identity = 90/258 (34.88%), Postives = 125/258 (48.45%), Query Frame = 0
Query:  153 REGHLEFLSQFTNGVHQALLDVGGLGQTWPAAVDLHDAPLHEAIMALDDYGASDGQVRFLDHAYSCALRAFCQSRDTGVRLNACRVAIAAGYNLHSRTRSPWAGKEFVARGTLRNIIRGLSPLWQESATSSAGGGGRREASWADAASADMGTGTEVVDTMVFLLDAICSVLLLPPRGVHILGHLEAADKRLFPALGGFYARRREASVALPGVRTAALALLLQGWKLSDLVRVSERLGVNVDACQDKEDMARALVVHSR 410
            R  + +F   FT G+      +  L      A+ L  APL EA MAL ++ AS GQVRFLD A S AL A  Q     V+L+A  +A++AGY   S+T SP   K+F   GTL NI+  L+PLW +S+                 ASAD   G +V   + FLL+ +  V  LPP    +L  L   DKRL PA G   A   E     P V   A   LL    + DL  +++ + V+V  C  K+++ + L+   +
Sbjct:  151 RSENEQFFKSFTQGLEATHRGIQTL-----MAMQL-SAPLKEAEMALKNFTASKGQVRFLDEARSKALTALVQGHTVDVKLSAAVIAVSAGYVFASKTESPLEAKQFTVNGTLVNIVDVLAPLWVDSSRG---------------ASAD---GPKV---LAFLLNLVSCVCALPPVAEPVLPDL---DKRLLPAFGTLCATEPEIYRMYPEVGGVAARALLAIQTMRDLFELADEVDVDVAKCTSKDEVIQILLASGK 378          
BLAST of mRNA_S-ischiensis_contig9.20419.1 vs. uniprot
Match: D8LD84_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD84_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 2.550e-23
Identity = 83/231 (35.93%), Postives = 115/231 (49.78%), Query Frame = 0
Query:  176 GLGQTWPAAVDLHDAPLHEAIMALDDYGASDGQVRFLDHAYSCALRAFCQSRDTGVRLNACRVAIAAGYNLHSRTRSPWAGKEFVARGTLRNIIRGLSPLWQESATSSAGGGGRREASWADAASADMGTGTEVVDTMVFLLDAICSVLLLPPRGVHILGHLEAADKRLFPALGGFYARRREASVALPGVRTAALALLLQGWKLSDLVRVSERLGVNVDACQDKEDMARALV 406
            GL  T      L  APL EA MAL ++ AS G VRFLD A+S A+ A  Q     V+L+A  +A++AGY   S+T SP   K+F   GTL NI+  L+PLW +S+                AASAD   G +V   + FLL+ +  V  LPP    +L  L   DKRL PA G   A         P +   A   LL    + DL  +++ + V+V  C  K+++ + L+
Sbjct:  280 GLAATHRGIETLMSAPLKEAEMALKNFTASGGNVRFLDVAHSKAMTALVQGHTVDVKLSAAVIAVSAGYVFASKTDSPLEAKQFTVNGTLVNIVDVLAPLWVDSSR---------------AASAD---GPKV---LAFLLNLVSCVCALPPVAEPVLPDL---DKRLLPAFGTLCATEPGIYRMYPEIGGVAARALLASQTMRDLFELADEVDVDVARCTSKDEVIQILL 486          
BLAST of mRNA_S-ischiensis_contig9.20419.1 vs. uniprot
Match: A0A6H5KIE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIE6_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 1.430e-7
Identity = 41/119 (34.45%), Postives = 60/119 (50.42%), Query Frame = 0
Query:  137 ETPRERGFAREEASPGREGHLEFLSQFTNGVHQALLDVGGLGQTWPAAVDLHDAPLHEAIMALDDYGASDGQVRFLDHAYSCALRAFCQSRDTGVRLNACRVAIAAGYNLHSRTRSPWA 255
            E  R+    RE     R  ++ F + FT G+  A   +  +           +APL EA MAL ++ AS G VRFL+ A+S A+ A  Q     V+LNA  +A++AGY   S+  S +A
Sbjct:   30 EVKRDLASVRESVEDCRAENMVFFASFTAGLEAARQGIELM----------RNAPLEEAQMALKNFEASKGNVRFLETAHSKAMTALVQGHALDVKLNAAVIAVSAGYVHMSKVSSSFA 138          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20419.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KAT8_9PHAE5.440e-2529.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K720_9PHAE3.830e-2434.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LD84_ECTSI2.550e-2335.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KIE6_9PHAE1.430e-734.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..422
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:342885..346452 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20419.1mRNA_S-ischiensis_contig9.20419.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 342883..346452 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20419.1 ID=prot_S-ischiensis_contig9.20419.1|Name=mRNA_S-ischiensis_contig9.20419.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=422bp
LALLAPCFAAFRQHRSCISTAAAAARCPRALVCAHTRQLASEHGRVAQQF
ANHAAVWRYRAMNTFKLTAALASLGDDEHGGEVMEVASGAGTWENAPEMT
QLVIALASHKDEANDGLMALARGPGGDSDTTALLTVETPRERGFAREEAS
PGREGHLEFLSQFTNGVHQALLDVGGLGQTWPAAVDLHDAPLHEAIMALD
DYGASDGQVRFLDHAYSCALRAFCQSRDTGVRLNACRVAIAAGYNLHSRT
RSPWAGKEFVARGTLRNIIRGLSPLWQESATSSAGGGGRREASWADAASA
DMGTGTEVVDTMVFLLDAICSVLLLPPRGVHILGHLEAADKRLFPALGGF
YARRREASVALPGVRTAALALLLQGWKLSDLVRVSERLGVNVDACQDKED
MARALVVHSRWSLELLLGGRAD
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