prot_S-ischiensis_contig9.20393.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20393.1
Unique Nameprot_S-ischiensis_contig9.20393.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length88
Homology
BLAST of mRNA_S-ischiensis_contig9.20393.1 vs. uniprot
Match: D8LN43_ECTSI (DIS3-like exonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN43_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 1.020e-23
Identity = 54/72 (75.00%), Postives = 61/72 (84.72%), Query Frame = 0
Query:    9 LLKALATRAMTEAEYVCTGMLTEHQAGGQ--QGQGESRFAHTGLGLGHYTHFTSPIRRYADIIVHRLLLASL 78
            LLK+LA RAM+EAEYV TG L++HQA G+  + Q ESRF H GLGL HYTHFTSPIRRYADI+VHRLLLASL
Sbjct:  891 LLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQEESRFGHFGLGLSHYTHFTSPIRRYADIVVHRLLLASL 962          
BLAST of mRNA_S-ischiensis_contig9.20393.1 vs. uniprot
Match: A0A6H5JSW4_9PHAE (DIS3-like exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSW4_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 2.770e-21
Identity = 52/72 (72.22%), Postives = 59/72 (81.94%), Query Frame = 0
Query:    9 LLKALATRAMTEAEYVCTGMLTEHQAGGQ--QGQGESRFAHTGLGLGHYTHFTSPIRRYADIIVHRLLLASL 78
            LLK+LA RAM+EAEYV TG L++HQA G+  + Q  SRF H GLGL  YTHFTSPIRRYADI+VHRLLLASL
Sbjct:  485 LLKSLAVRAMSEAEYVSTGTLSDHQAHGKGLEAQEGSRFGHFGLGLSLYTHFTSPIRRYADIVVHRLLLASL 556          
BLAST of mRNA_S-ischiensis_contig9.20393.1 vs. uniprot
Match: A0A836CJZ0_9STRA (DIS3-like exonuclease 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ0_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 2.390e-20
Identity = 48/69 (69.57%), Postives = 55/69 (79.71%), Query Frame = 0
Query:    9 LLKALATRAMTEAEYVCTGMLTEHQAGGQQGQGESRFAHTGLGLGHYTHFTSPIRRYADIIVHRLLLAS 77
            LLK+LATR M+EA YVCTG L EH AGG  G    R +H GLG+G YTHFTSPIRRYAD++VHRLLLA+
Sbjct:  399 LLKSLATRVMSEAVYVCTGTLDEHSAGG--GVTGERLSHFGLGIGSYTHFTSPIRRYADVVVHRLLLAA 465          
BLAST of mRNA_S-ischiensis_contig9.20393.1 vs. uniprot
Match: A0A833WGM2_PHYIN (DIS3-like exonuclease 1 n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WGM2_PHYIN)

HSP 1 Score: 85.1 bits (209), Expect = 2.310e-17
Identity = 46/73 (63.01%), Postives = 54/73 (73.97%), Query Frame = 0
Query:    8 NLLKALATRAMTEAEYVCTGMLTEHQAGGQQGQGESRFAHTGLGLGHYTHFTSPIRRYADIIVHRLLLASLEA 80
            +LLK+LA R MTEAEYV +G +    A    G   +RFAH GLGL +YTHFTSPIRRYAD+IVHR LLAS+ A
Sbjct:  880 SLLKSLAVRVMTEAEYVSSGAVAAGDAASANGD-VTRFAHYGLGLQYYTHFTSPIRRYADVIVHRQLLASIAA 951          
BLAST of mRNA_S-ischiensis_contig9.20393.1 vs. uniprot
Match: D0NJG3_PHYIT (DIS3-like exonuclease 1 n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NJG3_PHYIT)

HSP 1 Score: 85.1 bits (209), Expect = 2.310e-17
Identity = 46/73 (63.01%), Postives = 54/73 (73.97%), Query Frame = 0
Query:    8 NLLKALATRAMTEAEYVCTGMLTEHQAGGQQGQGESRFAHTGLGLGHYTHFTSPIRRYADIIVHRLLLASLEA 80
            +LLK+LA R MTEAEYV +G +    A    G   +RFAH GLGL +YTHFTSPIRRYAD+IVHR LLAS+ A
Sbjct: 1087 SLLKSLAVRVMTEAEYVSSGAVAAGDAASANGD-VTRFAHYGLGLQYYTHFTSPIRRYADVIVHRQLLASIAA 1158          
BLAST of mRNA_S-ischiensis_contig9.20393.1 vs. uniprot
Match: A0A3M6VPV9_9STRA (DIS3-like exonuclease 1 n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VPV9_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 3.150e-17
Identity = 49/80 (61.25%), Postives = 56/80 (70.00%), Query Frame = 0
Query:    1 RASTAARNLLKALATRAMTEAEYVCTGMLTEHQAGGQQGQGESRFAHTGLGLGHYTHFTSPIRRYADIIVHRLLLASLEA 80
            R  T   +LLK+LA R MTEAEYV +G      A    G   +RFAH GLGL +YTHFTSPIRRYADIIVHR LLAS++A
Sbjct:  872 RMDTKTMSLLKSLAVRVMTEAEYVSSGETAAGDAATANGD-ITRFAHYGLGLQYYTHFTSPIRRYADIIVHRQLLASIKA 950          
BLAST of mRNA_S-ischiensis_contig9.20393.1 vs. uniprot
Match: A0A5D6XKW3_9STRA (DIS3-like exonuclease 1 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKW3_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 3.150e-17
Identity = 47/77 (61.04%), Postives = 51/77 (66.23%), Query Frame = 0
Query:    9 LLKALATRAMTEAEYVCTGMLTEHQAGGQQGQGESRFAHTGLGLGHYTHFTSPIRRYADIIVHRLLLASLEAHQRGG 85
            LLK+LA R M++AEYVC        A        + FAH GLGL HYTHFTSPIRRYADIIVHR LLASLE   R G
Sbjct:  885 LLKSLAVRVMSQAEYVCASDADARSAANDD---TTSFAHYGLGLQHYTHFTSPIRRYADIIVHRQLLASLEIETRSG 958          
BLAST of mRNA_S-ischiensis_contig9.20393.1 vs. uniprot
Match: W2QZJ8_PHYPN (DIS3-like exonuclease 1 n=11 Tax=Phytophthora TaxID=4783 RepID=W2QZJ8_PHYPN)

HSP 1 Score: 84.3 bits (207), Expect = 4.300e-17
Identity = 46/73 (63.01%), Postives = 54/73 (73.97%), Query Frame = 0
Query:    8 NLLKALATRAMTEAEYVCTGMLTEHQAGGQQGQGESRFAHTGLGLGHYTHFTSPIRRYADIIVHRLLLASLEA 80
            +LLK+LA R MTEAEYV +G +    A    G   +RFAH GLGL +YTHFTSPIRRYAD+IVHR LLAS+ A
Sbjct:  879 SLLKSLAVRVMTEAEYVSSGAVAAGDAATANGDA-TRFAHYGLGLQYYTHFTSPIRRYADVIVHRQLLASIVA 950          
BLAST of mRNA_S-ischiensis_contig9.20393.1 vs. uniprot
Match: A0A3R7JUU4_9STRA (DIS3-like exonuclease 1 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JUU4_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 4.320e-17
Identity = 45/71 (63.38%), Postives = 54/71 (76.06%), Query Frame = 0
Query:    8 NLLKALATRAMTEAEYVCTGMLTEHQAGGQQGQGESRFAHTGLGLGHYTHFTSPIRRYADIIVHRLLLASL 78
            +LLK+LA R MTEAEYV +G +T   A    G   +RFAH GLGL +YTHFTSPIRRYAD+IVHR LLA++
Sbjct: 1063 SLLKSLAVRVMTEAEYVSSGAVTSEGAAALNGD-VTRFAHYGLGLQYYTHFTSPIRRYADVIVHRQLLAAV 1132          
BLAST of mRNA_S-ischiensis_contig9.20393.1 vs. uniprot
Match: H3HBA3_PHYRM (DIS3-like exonuclease 1 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HBA3_PHYRM)

HSP 1 Score: 84.0 bits (206), Expect = 5.850e-17
Identity = 45/73 (61.64%), Postives = 54/73 (73.97%), Query Frame = 0
Query:    8 NLLKALATRAMTEAEYVCTGMLTEHQAGGQQGQGESRFAHTGLGLGHYTHFTSPIRRYADIIVHRLLLASLEA 80
            +LLK+LA R MTEAEYV +G +    A    G   +RFAH GLGL +YTHFTSPIRRYAD+IVHR LLA++ A
Sbjct:  794 SLLKSLAVRVMTEAEYVSSGAVAAGDAAAANGD-VTRFAHYGLGLQYYTHFTSPIRRYADVIVHRQLLAAIAA 865          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20393.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN43_ECTSI1.020e-2375.00DIS3-like exonuclease 1 n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSW4_9PHAE2.770e-2172.22DIS3-like exonuclease 1 n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CJZ0_9STRA2.390e-2069.57DIS3-like exonuclease 1 n=1 Tax=Tribonema minus Ta... [more]
A0A833WGM2_PHYIN2.310e-1763.01DIS3-like exonuclease 1 n=1 Tax=Phytophthora infes... [more]
D0NJG3_PHYIT2.310e-1763.01DIS3-like exonuclease 1 n=1 Tax=Phytophthora infes... [more]
A0A3M6VPV9_9STRA3.150e-1761.25DIS3-like exonuclease 1 n=2 Tax=Peronospora effusa... [more]
A0A5D6XKW3_9STRA3.150e-1761.04DIS3-like exonuclease 1 n=1 Tax=Pythium brassicum ... [more]
W2QZJ8_PHYPN4.300e-1763.01DIS3-like exonuclease 1 n=11 Tax=Phytophthora TaxI... [more]
A0A3R7JUU4_9STRA4.320e-1763.38DIS3-like exonuclease 1 n=3 Tax=Phytophthora kerno... [more]
H3HBA3_PHYRM5.850e-1761.64DIS3-like exonuclease 1 n=1 Tax=Phytophthora ramor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001900Ribonuclease II/RPFAMPF00773RNBcoord: 6..78
e-value: 1.1E-17
score: 64.4
NoneNo IPR availablePANTHERPTHR23355RIBONUCLEASEcoord: 6..82
IPR031192DIS3-like exonuclease 1PANTHERPTHR23355:SF30DIS3-LIKE EXONUCLEASE 1coord: 6..82
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 5..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:185476..186267 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20393.1mRNA_S-ischiensis_contig9.20393.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 185476..186267 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20393.1 ID=prot_S-ischiensis_contig9.20393.1|Name=mRNA_S-ischiensis_contig9.20393.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=88bp
RASTAARNLLKALATRAMTEAEYVCTGMLTEHQAGGQQGQGESRFAHTGL
GLGHYTHFTSPIRRYADIIVHRLLLASLEAHQRGGGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001900RNase_II/R
IPR031192DIS3L
IPR012340NA-bd_OB-fold