prot_S-ischiensis_contig88.20311.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig88.20311.1
Unique Nameprot_S-ischiensis_contig88.20311.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length710
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig88.20311.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 115..217
e-value: 5.4E-25
score: 89.8
coord: 327..430
e-value: 4.1E-26
score: 93.4
coord: 3..114
e-value: 3.1E-20
score: 74.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 451..656
e-value: 2.9E-52
score: 179.9
coord: 218..326
e-value: 2.6E-23
score: 84.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 62..229
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 158..203
e-value: 8.9E-4
score: 19.3
coord: 42..72
e-value: 1.7E-4
score: 21.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 524..571
e-value: 2.7E-7
score: 30.7
coord: 99..147
e-value: 7.0E-11
score: 42.1
coord: 280..323
e-value: 1.5E-7
score: 31.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 598..624
e-value: 0.0042
score: 17.2
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 172..205
e-value: 1.5E-4
score: 19.7
coord: 421..449
e-value: 1.8E-4
score: 19.5
coord: 279..312
e-value: 1.4E-7
score: 29.2
coord: 138..170
e-value: 5.2E-6
score: 24.3
coord: 352..383
e-value: 2.9E-4
score: 18.8
coord: 598..624
e-value: 3.4E-4
score: 18.6
coord: 457..491
e-value: 7.1E-9
score: 33.3
coord: 102..135
e-value: 1.5E-6
score: 26.0
coord: 492..526
e-value: 9.3E-8
score: 29.8
coord: 386..419
e-value: 2.0E-4
score: 19.3
coord: 563..595
e-value: 0.0032
score: 15.5
coord: 528..560
e-value: 4.5E-6
score: 24.5
coord: 63..90
e-value: 2.6E-4
score: 19.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 135..169
score: 11.027
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 311..347
score: 10.326
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 560..594
score: 10.106
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 383..417
score: 10.446
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 170..204
score: 10.227
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 418..452
score: 9.58
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 276..310
score: 11.816
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 455..489
score: 12.671
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 595..625
score: 8.517
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 205..240
score: 5.996
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 241..275
score: 7.377
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 348..382
score: 9.525
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 100..134
score: 11.586
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 525..559
score: 10.841
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 490..524
score: 12.397
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 23..59
score: 8.791
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 60..90
score: 9.054
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 352..519
e-value: 2.6E-14
score: 53.1
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 202..326
coord: 10..217
coord: 327..455
coord: 418..624

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig88contigS-ischiensis_contig88:318591..343325 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig88.20311.1mRNA_S-ischiensis_contig88.20311.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig88 318502..343398 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig88.20311.1 ID=prot_S-ischiensis_contig88.20311.1|Name=mRNA_S-ischiensis_contig88.20311.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=710bp
MRRAANAGRWAKVLSDLAGGPRTRPVFNAAIAAMAKANPARANLAKRLLK
EMRQEGIQPTTRSYNLAMKACVRAGEWQQAISLLQELREEREQGGDMAPD
AVTFNTAIDGCAKAGKAAEALELMSEMRELHVRMDRFTYSAGMNACSRSG
LWEEALDLLYEMQSQGLHGDAVAYSTAVTACGRALQWRQALRVLGEMREN
GVRRDTVCMMAVMEALVLSKKWAEALLLLKEILGDPDIAPNAHCFNLGID
AASGARQWQLVKPLLSQMRAAGLNPDGRTFGAAIHAFSKAGRAADALRML
EEMRSAGIVPDTRTYTNAITACSKDRQGLWEPAVRLLEDMRHDGLSPDTI
HYTAAIGACGVKGEWAKAVALLADMRERGVTRDAVAFNAGMRACNRAQRW
DGTLSLLAEMREAGMSPNVKAFNAAIEACAGRGDWEGALSLLEEMRTAGG
GVSPNVYSFSAAINACSKGGRWEKAVSLLEDMRAEGLEPNEVTYTAAIDA
CARAGKASEGLAVLAEMRARGVQPNVFSCTAAMGGLARLGRWEEALAMLG
LMKEEGPAPNPSTYIAAMQACGEALEWRRAVELLDVMREDGVAPNGRCFS
AAVNACTKAGQWEEALAVLEGMRKGRGTKSGGSGPAAEAAHAKRVGVLRA
AVEKCQWRGDPVIAVDLLDELASPGRRPPPRRETGGGGGSGGGGDSSGGG
TAAVPRGRQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
IPR033443PPR_long