prot_S-ischiensis_contig88.20308.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig88.20308.1
Unique Nameprot_S-ischiensis_contig88.20308.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length75
Homology
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BLAST of mRNA_S-ischiensis_contig88.20308.1 vs. uniprot
Match: D7G4S5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4S5_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 5.570e-11
Identity = 35/75 (46.67%), Postives = 43/75 (57.33%), Query Frame = 0 
Query:    1 MPLEDFIREVNRDDYDESVAKDMPRYPGAALAFHVYYKNIQVMSTLAVGAATAMWLKRG--RAERLVLGMMPRYA 73
            MPL D  +  +   YDESVAKDMP YPG AL  HV  KN+Q+ ST+   A+  +WL         LVL   PR+A
Sbjct:    1 MPLADLNKRADLSKYDESVAKDMPEYPGLALTSHVLLKNVQLWSTVGSVASLGVWLNSPDRSVSSLVLKQWPRFA 75
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig88.20308.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G4S5_ECTSI5.570e-1146.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..56
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 57..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig88contigS-ischiensis_contig88:278491..281223 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig88.20308.1mRNA_S-ischiensis_contig88.20308.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig88 278484..281223 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig88.20308.1 ID=prot_S-ischiensis_contig88.20308.1|Name=mRNA_S-ischiensis_contig88.20308.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=75bp
MPLEDFIREVNRDDYDESVAKDMPRYPGAALAFHVYYKNIQVMSTLAVGA
ATAMWLKRGRAERLVLGMMPRYARR
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