prot_S-ischiensis_contig87.20278.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig87.20278.1
Unique Nameprot_S-ischiensis_contig87.20278.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length250
Homology
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BLAST of mRNA_S-ischiensis_contig87.20278.1 vs. uniprot
Match: D8LRB0_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB0_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 1.950e-16
Identity = 52/109 (47.71%), Postives = 75/109 (68.81%), Query Frame = 0 
Query:    1 DQEYYSPDIEQRGVTVTKMTGVGKSEVCKLFVRGDGFQLVTPERRVFRPQSRSFRFRDLTSVVVSGDRSLALSVNSSNKDIFLTAADRSTTEYIVDCLCRGRRDEKRRQ 109
            + E Y P++E RGV V K +  GKSE+ +L+VRGD  +LV PE+R+FR QS+ F   +LT+VV  G+RSL+LS+ +  K + LT ADR+T EY+ + L R  R++ R Q
Sbjct:   33 EPEPYPPNLE-RGVKVRKRSMAGKSEIRRLYVRGDTIELVNPEKRMFRSQSKVFPLSELTAVVAQGERSLSLSLGA--KGLHLTLADRATKEYLWEHL-RKMREQAREQ 137
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BLAST of mRNA_S-ischiensis_contig87.20278.1 vs. uniprot
Match: A0A6H5LG27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LG27_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 2.010e-16
Identity = 52/109 (47.71%), Postives = 75/109 (68.81%), Query Frame = 0 
Query:    1 DQEYYSPDIEQRGVTVTKMTGVGKSEVCKLFVRGDGFQLVTPERRVFRPQSRSFRFRDLTSVVVSGDRSLALSVNSSNKDIFLTAADRSTTEYIVDCLCRGRRDEKRRQ 109
            + E Y P++E RGV V K +  GKSE+ +L+VRGD  +LV PE+R+FR QS+ F   +LT+VV  G+RSL+LS+ +  K + LT ADR+T EY+ + L R  R++ R Q
Sbjct:   33 EPEPYPPNLE-RGVKVRKRSMAGKSEIRRLYVRGDTIELVNPEKRMFRSQSKIFPLSELTAVVAQGERSLSLSLGA--KGLHLTLADRATKEYLWEHL-RKMREQAREQ 137
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig87.20278.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRB0_ECTSI1.950e-1647.71NB-ARC and TPR repeat-containig protein n=1 Tax=Ec... [more]
A0A6H5LG27_9PHAE2.010e-1647.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig87contigS-ischiensis_contig87:465558..471701 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig87.20278.1mRNA_S-ischiensis_contig87.20278.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig87 465556..471701 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig87.20278.1 ID=prot_S-ischiensis_contig87.20278.1|Name=mRNA_S-ischiensis_contig87.20278.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=250bp
DQEYYSPDIEQRGVTVTKMTGVGKSEVCKLFVRGDGFQLVTPERRVFRPQ
SRSFRFRDLTSVVVSGDRSLALSVNSSNKDIFLTAADRSTTEYIVDCLCR
GRRDEKRRQLLQLDRHRHQRQDPHASYHDAQWQQVQRPAAHLRRTSSTDS
LMALAATTPPSSATPVTAAAAASQGGGRPRHHLRRLRRIQSLNDVSVDEN
RCRGSGDVSSGVGGGGGDDDDGGGGGGGRGHEGEGEGAGKQSGGGGGRDD
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