prot_S-ischiensis_contig87.20275.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig87.20275.1
Unique Nameprot_S-ischiensis_contig87.20275.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length288
Homology
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BLAST of mRNA_S-ischiensis_contig87.20275.1 vs. uniprot
Match: D8LRB0_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB0_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 2.850e-32
Identity = 75/167 (44.91%), Postives = 101/167 (60.48%), Query Frame = 0 
Query:    1 ENKEVSVSLPWGPQGPGAGEAASFLTAEIATRGLTCLLVLDDAWDRQTMDSLRTLGFHLLVTANDGGQLSPNAWHVSLGGGYTSGGYGGDGPAVGPAEAVAPLSNLGSEVVAVERMDEAEAKEFLQKLAGVTNADWNRLRDSEVVSALVSLCRGLPQALANMGSLLR 167
            ++ EV V LPWG +GP  GE A+FL A +ATRGLTCLLV+DD WDR+++D +R LGFH++VTAN  G L            +T  G G               + LGSEVVAV+RMD+ E K  LQ+ + +   DW  LRD+E V +++ LCR  P AL  +G+ L+
Sbjct:  652 QDDEVEVELPWGTRGPREGEVAAFLAAHLATRGLTCLLVVDDLWDRESLDQVRDLGFHVMVTANSKGLL------------WTQQGAG-------------LAATLGSEVVAVDRMDDDECKLLLQRCSMIETVDWAALRDTEPVKSIIKLCRYGPHALVMVGTTLQ 793
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BLAST of mRNA_S-ischiensis_contig87.20275.1 vs. uniprot
Match: A0A6H5LG27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LG27_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 1.290e-27
Identity = 69/141 (48.94%), Postives = 86/141 (60.99%), Query Frame = 0 
Query:    4 EVSVSLPWGPQGPGAGEAASFLTAEIATRGLTCLLVLDDAWDRQTMDSLRTLGFHLLVTANDGGQLSPNAWHVSLGGGYTSGGYGGDGPAVGPAEAVAPLSNLGSEVVAVERMDEAEAKEFLQKLAGVTNADWNRLRDSEV 144
            EV V LPWG +GP  GE A+FL A +ATRGLTCLLV+DD WDR+++D +R LGFH++VTAN  G L            +T  G G               + LGSEVVAV+RMDE E K  LQ+ + +  ADW  LRD+EV
Sbjct: 1127 EVEVELPWGTRGPREGEVAAFLAAHLATRGLTCLLVVDDLWDRESLDQVRDLGFHVMVTANSKGLL------------WTQQGAG-------------LAATLGSEVVAVDRMDEDECKLLLQRCSMIEMADWAALRDTEV 1242
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig87.20275.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRB0_ECTSI2.850e-3244.91NB-ARC and TPR repeat-containig protein n=1 Tax=Ec... [more]
A0A6H5LG27_9PHAE1.290e-2748.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig87contigS-ischiensis_contig87:451365..454067 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig87.20275.1mRNA_S-ischiensis_contig87.20275.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig87 451365..454067 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig87.20275.1 ID=prot_S-ischiensis_contig87.20275.1|Name=mRNA_S-ischiensis_contig87.20275.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=288bp
ENKEVSVSLPWGPQGPGAGEAASFLTAEIATRGLTCLLVLDDAWDRQTMD
SLRTLGFHLLVTANDGGQLSPNAWHVSLGGGYTSGGYGGDGPAVGPAEAV
APLSNLGSEVVAVERMDEAEAKEFLQKLAGVTNADWNRLRDSEVVSALVS
LCRGLPQALANMGSLLRAGKGARDGGSASGGGVDDDGSQALYSALYDWAE
AHDRLCDALEDGHTHNLARWPPVHQQQGSMSKAATAPATVTPTAVTPTVP
PHNPQGGHPPRPPPPPTPPPPQPARLPNPPSLPPSPVP
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