prot_S-ischiensis_contig87.20269.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig87.20269.1
Unique Nameprot_S-ischiensis_contig87.20269.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length135
Homology
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BLAST of mRNA_S-ischiensis_contig87.20269.1 vs. uniprot
Match: D7FHE8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHE8_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 1.360e-9
Identity = 43/112 (38.39%), Postives = 55/112 (49.11%), Query Frame = 0 
Query:   21 LDPNQEREAYTSFLDFGLCGRCDRTYRIVDGARH----SMTEEERTGWARERERVREVLENCRRKKAVFRAERRWSAVALE-TEAIKAAETRVEELRRLLEHVVTSCPFCLW 127
            +D + E E    FL FGLCGRCDR +RI  G +H    S  E    G ++ R  +  ++      K   RA R      LE TE ++A    V   RR L  +V SCPFCLW
Sbjct:   11 VDGSLEYEERAKFLQFGLCGRCDRVFRISQGWKHVEQKSRHETVVDGESKLRH-LSTLVAKAEMNKTALRAARGAHKDILEATEKLRALRHEVSATRRALAPLVMSCPFCLW 121
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig87.20269.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHE8_ECTSI1.360e-938.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 94..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig87contigS-ischiensis_contig87:420200..424609 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig87.20269.1mRNA_S-ischiensis_contig87.20269.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig87 419750..424618 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig87.20269.1 ID=prot_S-ischiensis_contig87.20269.1|Name=mRNA_S-ischiensis_contig87.20269.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=135bp
MRQGGHLVRVSIPHSESLEALDPNQEREAYTSFLDFGLCGRCDRTYRIVD
GARHSMTEEERTGWARERERVREVLENCRRKKAVFRAERRWSAVALETEA
IKAAETRVEELRRLLEHVVTSCPFCLWRPSESTA*
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