prot_S-ischiensis_contig87.20249.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig87.20249.1
Unique Nameprot_S-ischiensis_contig87.20249.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length301
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig87.20249.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 24..192
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 252..281
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 241..251
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 219..240
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 193..213
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 214..218
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 282..301

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig87contigS-ischiensis_contig87:255135..256037 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig87.20249.1mRNA_S-ischiensis_contig87.20249.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig87 254960..256037 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig87.20249.1 ID=prot_S-ischiensis_contig87.20249.1|Name=mRNA_S-ischiensis_contig87.20249.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=301bp
MVLEYGRVYSCTIWYLVLEYFLVASLRARRDSAPVHSTLPHNTENIEQSA
PHAIRPLVIPPVRSSTPVSSCVRRCLAGATSPAQPARRRHRHRRLAPVPL
ARPPLLAAFAAPVLPAATAAAGQRRPVIHAHVRPRRNGPRTRAVPAPALL
RVRAWARGGPILGAPRAGAGAVTWPLGAGAPGRGPRGAAVVRVLAAAAAV
ARGLAAAALVVRVLAATAIVARVLAAALVVRVQAAAALVVRVQAATAIVA
RVLAAAATVARVQAAAALVTRVLAVTVVVGAGSRGPDLAVLAAARGPGPL
Q
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