prot_S-ischiensis_contig86.20198.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig86.20198.1
Unique Nameprot_S-ischiensis_contig86.20198.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length188
Homology
BLAST of mRNA_S-ischiensis_contig86.20198.1 vs. uniprot
Match: D7FZC8_ECTSI (ATP synthase subunit d, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZC8_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 2.240e-20
Identity = 61/180 (33.89%), Postives = 89/180 (49.44%), Query Frame = 0
Query:    1 MLVGAFRRTAPRAAGHNIDWNKLLGRMMTEEHKSEIVRFKAKVSEIEAMHEKYSKEPEPIDWASYRAFFNXXXXXXXXXXXQPACAWQIAEMEKEYAGVSLPSYTARDP------------AELRTAMEPSFEHAKTVVEEAKVKVEELTERLAVLEANRTTRDTTLEDIWRVYPDIEKK 168
            M+ G  RR+ PRA+G  +DW K+ G  +  E KS ++  K +V++ +AMHEKYSK+PEPIDWASY+ FF              +   Q+A    E   + +      DP             EL          A+T   EAKV    L ++  +L+ N T   TT+ DI++ YP IE++
Sbjct:    1 MIGGVIRRSVPRASGITVDWAKMAGNCVAAESKSFVIGLKQEVAQADAMHEKYSKQPEPIDWASYKEFFGNHPTIAKLQEEYESTK-QVAMPAPEAPEMMMKPVAVGDPKDIDWEGSWKTYGELFDGNTAQLAAAQTGNTEAKVVA--LADKEQLLKNNMTNDQTTVADIFKKYPQIEQE 177          
BLAST of mRNA_S-ischiensis_contig86.20198.1 vs. uniprot
Match: A0A7S2CQH6_9STRA (ATP synthase subunit d, mitochondrial n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CQH6_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.460e-14
Identity = 46/152 (30.26%), Postives = 78/152 (51.32%), Query Frame = 0
Query:   18 IDWNKLLGRMMTEEHKSEIVRFKAKVSEIEAMHEKYSKEPEPIDWASYRAFFNXXXXXXXXXXXQPACAWQIAEMEKEYAGVSLPSYTARDPAELRTAMEPSFEHAKTVVEEAKVKVEELTERLAVLEANRTTRDTTLEDIWRVYPDIEKKV 169
            IDW+ L  ++ ++  +SE  R +A   EI+ +   Y++ P PID+A Y+A              + A    + + E  Y GVS P   AR+  E+R         A+  V ++  ++E LT  +  +E+N  + DTTLE ++ VYPD+E ++
Sbjct:   34 IDWSALSSKLTSDGARSEFARLRATYGEIQGLANTYAEPPSPIDFAGYKA--------------KIAAPGLVEKFEAAYNGVSYPKAVARELDEVRQEHATMIADAEQSVADSVSRIEALTALVETMESNMVSPDTTLEQLYEVYPDLEAEI 171          
BLAST of mRNA_S-ischiensis_contig86.20198.1 vs. uniprot
Match: A0A7S3JVE1_9STRA (ATP synthase subunit d, mitochondrial n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVE1_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 2.510e-12
Identity = 47/149 (31.54%), Postives = 81/149 (54.36%), Query Frame = 0
Query:   23 LLGRMMTEEHKSEIVRFKAKVSEIEAMHEKYSKEPEPIDWASYRAFFNXXXXXXXXXXXQPACAWQIAEMEKEYAGVSLPSYT--ARDPAELRTAMEPSFEHAKTVVEEAKVKVEELTERLAVLEANRTTRDTTLEDIWRVYPDIEKKV 169
            LL  +  +E KSEI R K   SEI ++  KY  EPEPID++ Y++                  A  + ++E  Y+ V +P +      P E    ++ + + A  +++E+K ++ EL   +A L+A++   DTT+EDI++ +P+IEK+V
Sbjct:   26 LLSVVSGDEAKSEINRLKVMASEISSLEAKYLGEPEPIDFSMYKSKLG---------------AGVVDKIEALYSQVHIPKFPDGGMTPEE-ENELDQTLKEADKLIDESKARIVELNAEIASLKASKVGPDTTVEDIYKAFPEIEKEV 158          
BLAST of mRNA_S-ischiensis_contig86.20198.1 vs. uniprot
Match: A0A835YKM0_9STRA (ATP synthase subunit d, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKM0_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 2.600e-9
Identity = 53/174 (30.46%), Postives = 87/174 (50.00%), Query Frame = 0
Query:    5 AFRRTAPRAAGHN--IDWNKLLGRMMTEEHKSEIVRFKAKVSEIEAMHEKYSKEPEPIDWASYRAFFNXXXXXXXXXXXQPACAWQIAEMEKEYAGV--SLPSYTA-----RDPAELRTAMEPSFEHAKTVVEEAKVKVEELTERLAVLEANRTTRDTTLEDIWRVYPDIEKKV 169
            A RR+A R    +   DW+++L +   + H S ++  +   +++ A   KYS+ P PIDWASYR                    + +  MEK+YA    S   +T       D AE+  A     E     VEE+KV++ +L   LA +  +RTTR+TT++D+ + YP++ K++
Sbjct:    2 ALRRSARRLKDMSATFDWDRIL-KGPVKPHPS-VLELRTDAAKVTAELAKYSEPPAPIDWASYRKRMKDP--------------YVVDLMEKDYAASQKSFRKFTVGELFDMDAAEVEFASR--MERVNKQVEESKVELVKLEALLATMMKSRTTRETTVDDMIKAYPEMAKEI 157          
BLAST of mRNA_S-ischiensis_contig86.20198.1 vs. uniprot
Match: A0A6S8YNK8_9STRA (ATP synthase subunit d, mitochondrial n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8YNK8_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.430e-7
Identity = 48/169 (28.40%), Postives = 77/169 (45.56%), Query Frame = 0
Query:    2 LVGAFRRTAPRA-AGHNIDWNKLLGRMMTEEHKSEIVRFKAKVSEIEAMHEKYSKEPEPIDWASYRAFFNXXXXXXXXXXXQPACAWQIAEMEKEYAGVSLPSYTARDPAELRTAMEPSFEHAKTVVEEAKVKVEELTERLAVLEANRTTRDTTLEDIWRVYPDIEKKV 169
              G  RR A R     ++DW+  + +   +E  +++ RF+A     EAM EKYS+ P PID+A+ ++                     +  +E  Y     P  T    AE +       E A+  +   +  +EE    LA L ANRTTR+T+  D+ + +PDI ++V
Sbjct:    3 FAGTVRRVATRKITQRSVDWSAPVFKGGDQELAAQVGRFRAWAGAAEAMAEKYSEPPAPIDFAAAKSSVRDKAL--------------VEALEALYTTSKPPVETHEWSAEDQADKAQQIEDAQGRLAFTQEMIEETEAELAFLRANRTTRETSGNDLKQNFPDIAEEV 157          
BLAST of mRNA_S-ischiensis_contig86.20198.1 vs. uniprot
Match: A0A7S2IGI0_9STRA (ATP synthase subunit d, mitochondrial n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IGI0_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 7.320e-7
Identity = 48/167 (28.74%), Postives = 73/167 (43.71%), Query Frame = 0
Query:    4 GAFRRTAPRA-AGHNIDWNKLLGRMMTEEHKSEIVRFKAKVSEIEAMHEKYSKEPEPIDWASYRAFFNXXXXXXXXXXXQPACAWQIAEMEKEYAGVSLPSYTARDPAELRTAMEPSFEHAKTVVEEAKVKVEELTERLAVLEANRTTRDTTLEDIWRVYPDIEKKV 169
            G  RR A R     +IDW   + +    E  +++ RF+A     E+M EKYS  P PID+A  +                      +  +EK YA  + P+      AE +       E AK  +   +  +EE    L  L ANRT+R+T+  D+   +PDI ++V
Sbjct:    5 GTVRRVATRKLTQRSIDWAAPVFKSGDHELAAQVARFRAWAGAAESMAEKYSAPPAPIDFAKAKESVRDKAL--------------VEALEKLYATSTPPAEVHEWSAEDQADKAQQIEDAKGRLSFTQEMIEETEAELEFLRANRTSRETSGNDLKENFPDIAEEV 157          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig86.20198.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FZC8_ECTSI2.240e-2033.89ATP synthase subunit d, mitochondrial n=2 Tax=Ecto... [more]
A0A7S2CQH6_9STRA1.460e-1430.26ATP synthase subunit d, mitochondrial n=1 Tax=Flor... [more]
A0A7S3JVE1_9STRA2.510e-1231.54ATP synthase subunit d, mitochondrial n=1 Tax=Aure... [more]
A0A835YKM0_9STRA2.600e-930.46ATP synthase subunit d, mitochondrial n=1 Tax=Trib... [more]
A0A6S8YNK8_9STRA1.430e-728.40ATP synthase subunit d, mitochondrial n=2 Tax=Dity... [more]
A0A7S2IGI0_9STRA7.320e-728.74ATP synthase subunit d, mitochondrial n=1 Tax=Heli... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 120..147
NoneNo IPR availablePANTHERPTHR12700:SF12ATP SYNTHASE SUBUNIT D, MITOCHONDRIALcoord: 11..169
IPR036228ATP synthase, F0 complex, subunit D superfamily, mitochondrialGENE3D1.20.58.880coord: 9..146
e-value: 5.1E-11
score: 44.5
IPR036228ATP synthase, F0 complex, subunit D superfamily, mitochondrialSUPERFAMILY161065ATP synthase D chain-likecoord: 12..145
IPR008689ATP synthase, F0 complex, subunit D, mitochondrialPFAMPF05873Mt_ATP-synt_Dcoord: 12..165
e-value: 1.0E-10
score: 41.6
IPR008689ATP synthase, F0 complex, subunit D, mitochondrialPANTHERPTHR12700FAMILY NOT NAMEDcoord: 11..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig86contigS-ischiensis_contig86:330386..339973 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig86.20198.1mRNA_S-ischiensis_contig86.20198.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig86 330258..340017 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig86.20198.1 ID=prot_S-ischiensis_contig86.20198.1|Name=mRNA_S-ischiensis_contig86.20198.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=188bp
MLVGAFRRTAPRAAGHNIDWNKLLGRMMTEEHKSEIVRFKAKVSEIEAMH
EKYSKEPEPIDWASYRAFFNNNPAQQQQQEEQPACAWQIAEMEKEYAGVS
LPSYTARDPAELRTAMEPSFEHAKTVVEEAKVKVEELTERLAVLEANRTT
RDTTLEDIWRVYPDIEKKVCLISVAVCCFTDKPNGVD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036228ATP_synth_F0_dsu_sf_mt
IPR008689ATP_synth_F0_dsu_mt