prot_S-ischiensis_contig85.20144.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig85.20144.1
Unique Nameprot_S-ischiensis_contig85.20144.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length433
Homology
BLAST of mRNA_S-ischiensis_contig85.20144.1 vs. uniprot
Match: A0A6H5K8J3_9PHAE (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8J3_9PHAE)

HSP 1 Score: 372 bits (956), Expect = 2.320e-116
Identity = 197/348 (56.61%), Postives = 241/348 (69.25%), Query Frame = 0
Query:    4 FIHPSDRNGAVVRKRFTTEKVAKALSGYLSAVQGASDAVRTALQQLSSTLVDNKDLPAITQ-------------------------AAHWAVICQALEGHVRQAAASRWCLPRLKDPKDPDMSMQVEGLAPYWLPPGQGGVSNSFDLAGIFLLTAPNMSGKSTLLRATTAAALLANAGLHCPCMSATVPRYDGFFLRTASHDVPSEGKSAFAQEVEDVSVMLRDASPRTLAMVDELGRGTSARDGTAIAGAILEKMSHLSLTAIFATHLHELFDLPLRADPLVYKRMGIDWGGRGGEGEGEGGDDEPRWTYKLEDGRCTDSLGIQTARSYGFPEDVLGRAGEFREMFD 326
            F++P DRNG ++ KRFTTE+V+ ALSGYL+A++    AV   LQ LS ++V N DLP I Q                         AAHW+VICQA+EGHVR+A +S W LP LKD  +PDMSM+VE L PYWLP  Q  V NSFD  G+FLLTAPNMSGKSTL+RA  A +LL+NAGL  PC SA VPR+D FFLRTAS+D+P+E KSAFA E++DV VMLRD+S R+LA+VDELG+GT   DG ++AGAILE+M  +S+T IFATHLHELF+LPL  + L +KRMGIDW             D PRWTY +EDG+CTDSL +QTA+ Y  P  V+ RA    E FD
Sbjct:  403 FLNPHDRNGKLMPKRFTTERVSTALSGYLTAIEETKAAVLFQLQALSDSIVTNNDLPVIAQGVNAFLSLASVRTLHISPLTAPSRKAAHWSVICQAMEGHVRRALSSGWSLPSLKDVNNPDMSMKVENLVPYWLP-RQEAVPNSFDFGGLFLLTAPNMSGKSTLMRAVLACSLLSNAGLFAPCTSAVVPRFDCFFLRTASYDIPAEDKSAFALEMDDVRVMLRDSSGRSLALVDELGKGT---DGASLAGAILEEMDRVSITGIFATHLHELFELPLETESLTHKRMGIDWDDA----------DNPRWTYTMEDGKCTDSLALQTAKKYNIPAGVIARAQALSETFD 736          
BLAST of mRNA_S-ischiensis_contig85.20144.1 vs. uniprot
Match: A0A0G4EAV3_VITBC (DNA_MISMATCH_REPAIR_2 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EAV3_VITBC)

HSP 1 Score: 333 bits (853), Expect = 7.490e-100
Identity = 180/340 (52.94%), Postives = 226/340 (66.47%), Query Frame = 0
Query:    4 FIHPSDRNGAVVRKRFTTEKVAKALSGYLSAVQGASDAVRTALQQLSSTLVDNKDLPAITQAAHWAVICQALEGHVRQAAASRWCLPRLKDPKDPDMSMQVEGLAPYWLPPGQGG---VSNSFDLAGIFLLTAPNMSGKSTLLRATTAAALLANAGLHCPCMSATVPRYDGFFLRTASHDVPSEGKSAFAQEVEDVSVMLRDASPRTLAMVDELGRGTSARDGTAIAGAILEKMSHLSLTAIFATHLHELFDLPLRADPLVYKRMGIDWGGRGGEGEGEGGDDEPRWTYKLEDGRCTDSLGIQTARSYGFPEDVLGRAGEFREMFDTHCRTTAHQATSKP 340
            F+HP DRN  ++  R+TTE+V+ A+S Y+ A + A+ AVR AL+ LS  L+ +  LP +TQ+ H+ VI QA   HV  +    WCLP LK     DMSMQ+ GL PYW+  G+ G   V+NSFD+ G+ LLTAPNMSGKSTL+RATT AALLAN GL  PC SA VPRYD FF+RTA+ DVP+EGKSAFA E++D+ VMLRD SPR+L MVDELG+GTSARDG A+AGA+LE +  + +  IFATHLHEL  LPL    L Y +MG++     G+          RWTY+LEDG C DSL + TA+ +G P+ VL RA      FD   R      T  P
Sbjct:  658 FVHPIDRNNRILSNRWTTERVSLAVSRYVEAAEDAAAAVREALRTLSGELLMH--LPTLTQSTHFLVILQAAASHVSASLCKGWCLPTLKPVGGQDMSMQLNGLVPYWMD-GRDGILPVANSFDMDGLLLLTAPNMSGKSTLMRATTVAALLANCGLMVPCKSANVPRYDAFFVRTAAFDVPAEGKSAFALEMDDIRVMLRDCSPRSLVMVDELGKGTSARDGAALAGALLEALDSVPVRGIFATHLHELLHLPLETQTLSYHKMGVEVNDATGD---------VRWTYRLEDGICVDSLALATAKKFGLPKTVLDRAETLLNQFDETVRMPPVDFTPPP 985          
BLAST of mRNA_S-ischiensis_contig85.20144.1 vs. uniprot
Match: D7FNS7_ECTSI (MutS protein homolog 1A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNS7_ECTSI)

HSP 1 Score: 285 bits (730), Expect = 1.310e-89
Identity = 144/220 (65.45%), Postives = 176/220 (80.00%), Query Frame = 0
Query:    2 PTFIHPSDRNGAVVRKRFTTEKVAKALSGYLSAVQGASDAVRTALQQLSSTLVDNKDLPAITQAAHWAVICQALEGHVRQAAASRWCLPRLKDPKDPDMSMQVEGLAPYWLPPGQGGVSNSFDLAGIFLLTAPNMSGKSTLLRATTAAALLANAGLHCPCMSATVPRYDGFFLRTASHDVPSEGKSAFAQEVEDVSVMLRDASPRTLAMVDELGRGTSAR 221
            P F++P DRNG ++ KRFTTE+V+ ALSGYL+A++    AV++ LQ LS ++V N DLP I QAAHW+VICQA+EGHVR A +S W LP LKD  +PDMSM+VE L PYWLP  Q  V NSFD  G+FLLTAPNMSGKSTL+RA  A +LL+NAGL  PC SA VPR+D FFLRTAS+D+P+E KSAFA E++DV VMLRD+S R+LA+VDELG+GTSAR
Sbjct:  115 PKFLNPHDRNGKLLPKRFTTERVSTALSGYLTAIEETKTAVQSQLQALSDSIVTNNDLPVIAQAAHWSVICQAMEGHVRHALSSGWSLPSLKDLNNPDMSMKVENLVPYWLP-RQEAVPNSFDFGGLFLLTAPNMSGKSTLMRAVLACSLLSNAGLFAPCTSAVVPRFDCFFLRTASYDIPAEDKSAFALEMDDVRVMLRDSSDRSLALVDELGKGTSAR 333          
BLAST of mRNA_S-ischiensis_contig85.20144.1 vs. uniprot
Match: W7TDK9_9STRA (Dna mismatch repair protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TDK9_9STRA)

HSP 1 Score: 295 bits (755), Expect = 3.960e-88
Identity = 183/420 (43.57%), Postives = 233/420 (55.48%), Query Frame = 0
Query:    4 FIHPSDRNGAVVRKRFTTEKVAKALSGYLSAVQGASDAVRTALQQLSSTLVDNKDLPAITQAAHWAVICQALEGHVRQAAASRWCLPRLKD-------------------------------PKDPDMSMQVEGLAPYWLPPGQGGVSNSFDLAGIFLLTAPNMSGKSTLLRATTAAALLANAGLHCPCM-----------------------------------SATVPRYDGFFLRTASHDVPSEGKSAFAQEVEDVSVMLRDASPRTLAMVDELGRGTSARDGTAIAGAILEKMSHLSLTAIFATHLHELFDLPLR-ADPLVYKRMGIDWGGRGGEGEGEGGDDEP-----RWTYKLEDGRCTDSLGIQTARSYGFPEDVLGRAGEFREMFDTHCRTTAHQATSKPIGGGGTATDEQ 351
            +IHP+DR+   +  R+TT +V  AL+ YL A   A+ AVR ALQ LSSTL    DLP +  A H AV+ QA   HV  A    W LP L                                 P  P   M++  L PYWL    GGVS+S DL G+FLLTAPNMSGKSTL+R+   AALL NAGL  PCM                                   S  +PR+D  FLRTAS+DVPSEGKSAFA E++DV V+LRD++ R+L  +DELG+GTSAR+G A++GA++E +  + +T IFATHLHE+FDLPL+ +D + +KRMG +      E   EGG++ P     RWTY+LEDGRC DS+   TAR +G PE +L RA    + FD  CR    +  SK  G GG   D +
Sbjct:  277 YIHPTDRHRKPLSSRYTTVRVETALNDYLQACGQATVAVRRALQSLSSTL--RSDLPTLITATHMAVVLQAAAAHVAAAKQKGWTLPTLLSFSDSDCDGKEGDRGLSPSTPAVTPASHPLGPPSRPSWRMRLPNLTPYWLSRNSGGVSSSVDLDGLFLLTAPNMSGKSTLMRSIAVAALLGNAGLFVPCMTGKEGFEDVREGGGQGGLCGKRRKFQEGGPGAGRKSVVIPRFDHLFLRTASYDVPSEGKSAFALEMDDVRVLLRDSTSRSLVFLDELGKGTSAREGAALSGALIEALDAVPVTGIFATHLHEIFDLPLQTSDRVRWKRMGFE------EDVVEGGEEGPQERRVRWTYQLEDGRCLDSMAWYTARKFGIPETILARAQVLGKEFDASCRG---RGDSKEDGKGGGWRDSR 685          
BLAST of mRNA_S-ischiensis_contig85.20144.1 vs. uniprot
Match: A0A4D9CWC2_9STRA (DNA mismatch repair protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWC2_9STRA)

HSP 1 Score: 291 bits (746), Expect = 5.240e-85
Identity = 177/399 (44.36%), Postives = 224/399 (56.14%), Query Frame = 0
Query:    4 FIHPSDRNGAVVRKRFTTEKVAKALSGYLSAVQGASDAVRTALQQLSSTLVDNKDLPAITQAAHWAVICQALEGHVRQAAASRWCLPRLKDPKD-------------------------------PDMSMQVEGLAPYWLPPGQGGVSNSFDLAGIFLLTAPNMSGKSTLLRATTAAALLANAGLHCPCM-----------------------------------SATVPRYDGFFLRTASHDVPSEGKSAFAQEVEDVSVMLRDASPRTLAMVDELGRGTSARDGTAIAGAILEKMSHLSLTAIFATHLHELFDLPLR-ADPLVYKRMGIDWGGRGGEGEGEGGDDEP-----RWTYKLEDGRCTDSLGIQTARSYGFPEDVLGRAGEFREMFDTHCR 330
            +IHP+DR+   +  R+TT +V  AL+ YL A   A+ AVR ALQ LSSTL    DLP +  A H AV+ QA   HV  A    W LP L    D                               P   M++  L PYWL    GGVS+S DL G+FLLTAPNMSGKSTL+R+   AALL NAGL  PCM                                   S  +PR+D  FLRTAS+DVPSEGKSAFA E++DV V+LRD++ R+L  +DELG+GTSAR+G A++GA++E +  + +T IFATHLHE+FDLPL+ +D + +KRMG +      E   EGG++ P     RWTY+LEDGRC DS+   TAR +G PE +L RA      FD  CR
Sbjct:  745 YIHPTDRHRKPLSSRYTTARVETALNDYLQACGHATVAVRRALQSLSSTL--RSDLPTMITATHMAVVLQAAAAHVAAAKQKGWTLPALLSFSDSDCDGKEGDRGLSPSTPAAPPASHXXXXXXRPSWRMRLPNLTPYWLSRNSGGVSSSVDLDGLFLLTAPNMSGKSTLMRSIAVAALLGNAGLFVPCMTGKEGFEDVREGGGQGGLCGKRTKFQEAGSGAGRKSVVIPRFDHLFLRTASYDVPSEGKSAFALEMDDVRVLLRDSTSRSLVFLDELGKGTSAREGAALSGALIEALDAVPVTGIFATHLHEIFDLPLQTSDRVRWKRMGFE------EDVVEGGEEGPQERRVRWTYQLEDGRCLDSMAWYTARKFGIPETILARARVLGGEFDVSCR 1135          
BLAST of mRNA_S-ischiensis_contig85.20144.1 vs. uniprot
Match: A0A812URG2_SYMMI (MSH1 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812URG2_SYMMI)

HSP 1 Score: 268 bits (686), Expect = 3.120e-82
Identity = 148/340 (43.53%), Postives = 209/340 (61.47%), Query Frame = 0
Query:    5 IHPSDRNGAVVRKRFTTEKVAKALSGYLSAVQGASDAVRTALQQLSSTLVDNKDLPAITQAAHWAVICQALEGHVRQAAASRWCLPRLKDP--KDPDMSMQVEGLAPYWLP-PGQGGVSNSFDLAGIFLLTAPNMSGKSTLLRATTAAALLANAGLHCPCMSATVPRYDGFFLRTASHDVPSEGKSAFAQEVEDVSVMLRDASPRTLAMVDELGRGTSARDGTAIAGAILEKMSHLSLTAIFATHLHELFDLPLRADPLVYKRMGIDWGGRGGEGEGEGGDDEPRWTYKLEDGRCTDSLGIQTARSYGFPEDVLGRAGEFREMFDTHCRTTAHQATSKPI 341
            IHPSDR G  +  R+T+ +V +ALS Y+++   A    + AL+++ + L+  ++   I QA+H A++ Q    H   +    W LP +++       +++ + G+ PYW+   G   VSN  ++ GIFLLTAPNMSGKSTL+R+    ALLAN GL  PC+ A+VPRYD FFLRTASHD P EGKSAFA E++D+ VM+RD++ ++L M+DE+G+GTS+RDG A AGA+LE MS   +  IFATHLHEL  + L  D +  KRMG+                +P WTY LEDG CT+S+   TAR++G    ++ RA E +  FD     T     +K I
Sbjct:   16 IHPSDRYGQQIVNRYTSLRVNQALSSYIASAGQARTVTKHALREMCTALL--RESLTIVQASHVALLLQVAVLHATASRQKGWVLPVVENTTVSAQRVALTLHGMRPYWMDGAGSRAVSNDVEMNGIFLLTAPNMSGKSTLMRSILVTALLANCGLFVPCLRASVPRYDSFFLRTASHDTPLEGKSAFAVEMDDIRVMMRDSTQKSLVMIDEIGKGTSSRDGAAFAGALLEWMSSTGMHGIFATHLHELLHMKLNLDNVKMKRMGVTLTAP-----------DPAWTYCLEDGSCTNSMAFITARAFGITSSLIDRALEIQRAFDHESNMTGILEATKSI 342          
BLAST of mRNA_S-ischiensis_contig85.20144.1 vs. uniprot
Match: A0A7S0DLR2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DLR2_9EUKA)

HSP 1 Score: 259 bits (663), Expect = 7.110e-76
Identity = 149/365 (40.82%), Postives = 212/365 (58.08%), Query Frame = 0
Query:    4 FIHPSDRNGAVVRKRFTTEKVAKALSGYLSAVQGASDAVRTALQQLSSTLVDNKDLPAITQAAHWAVICQALEGHVRQAAASRWCLPRLKD-PK---------------DPDMS---------MQVEGLAPYWLPPGQGGVSNSFDLAGIFLLTAPNMSGKSTLLRATTAAALLANAGLHCPCMSATVPRYDGFFLRTASHDVPSEGKSAFAQEVEDVSVMLRDASPRTLAMVDELGRGTSARDGTAIAGAILEKMSHLSLTAIFATHLHELFDLPLRADPLVYKRMGIDWGGRGGEGEGEGGDDEPRWTYKLEDGRCTDSLGIQTARSYGFPEDVLGRAGEFREMFDT-HCRTTAHQATSKPIG 342
            +IHP DRN  +++ RFTT  V    SGY+SA + A  AV   L+ L+  +  ++D+  I QAAHW V+  ++  H   A    W +P L+  PK                P+ S         ++++ + PYW+P  Q  V NS  L GI+LLTAPNM+GKSTL+R+  A +LL N GL  PC  A +PRYD +FLR  SHDVP+EGKSAFA E++D+ VMLRD +PR+L   DE+G+GTS+RDG  +   +LE +S  + T IFATHLHE+  LP++A  L  ++M +      G       D +  W YKL+ G C DSL ++TAR    P++++ RA E    +D  + RT   Q  ++ +G
Sbjct:  133 YIHPRDRNKQMMQNRFTTSVVVSLCSGYVSAAEEAEKAVEGQLKSLAEAI--SQDMQVIVQAAHWGVLYHSINLHTHHARRLSWTIPDLEPLPKPVAHRRHEPQHRGDTSPEFSQDLPSIPPPLKLDLMIPYWMPINQA-VPNSVTLDGIYLLTAPNMAGKSTLMRSILACSLLGNCGLFVPCTRAFIPRYDSYFLRATSHDVPAEGKSAFAVEMDDLRVMLRDCTPRSLMAADEIGKGTSSRDGATLCAGLLEYLSANNATCIFATHLHEILKLPIQATRLKARQMAVKLDNDNGR------DIKTVWEYKLKPGVCLDSLALETARMCSIPQEIIQRALELEAYYDQINNRTFPTQGQTQAVG 488          
BLAST of mRNA_S-ischiensis_contig85.20144.1 vs. uniprot
Match: A0A7S1ZN30_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZN30_9STRA)

HSP 1 Score: 257 bits (656), Expect = 1.090e-75
Identity = 148/330 (44.85%), Postives = 202/330 (61.21%), Query Frame = 0
Query:    4 FIHPSDRNGAVVRKRFTTEKVAKALSGYLSAVQGASDAVRTALQQLSSTLVDNKDLPAITQAAHWAVICQALEGHVRQAAASRWCLPRLKDPKDP--DMSMQVEGLAPYWLPPGQGGVSNSFDLAGIFLLTAPNMSGKSTLLRATTAAALLANAGLHCPC-MSATVPRYDGFFLRTASHDVPSEGKSAFAQEVEDVSVMLRDASPRTLAMVDELGRGTSARDGTAIAGAILEKMSHLSLTAIFATHLHELFDLPL---RADPLVYKRMGIDWGGRGGEGEGEGGD-DEPRWTYKLEDGRCTDSLGIQTARSYGFPEDVLGRAGEFREMFD 326
            + HP DRNG V+RKR+TT  V  ALS Y+ + + A   V+  L +LS  + D   LPA+ QA+H  +I  +   H   + A  W + R  +  D   D +     + PYW+      V+NSFDL+G+FLLTAPNMSGKSTL+R+T AAALL+N GL  P   ++++ R+D  F+R AS DVP+E KSAF  E+ D++ +LR    R+L  VDELGRGTS +DGT++AGA+LE M+   ++ IFATHLH L  LPL     D +  KRM I    +G   +  G D  +  WTY+LEDG CTDSL + TA  +G  + +L RA    E+ D
Sbjct:  183 YYHPRDRNGKVLRKRYTTSNVENALSDYIESCENACKEVKAVLTKLSQVICDEGHLPAVVQASHANLILSSAAHHASNSNALGWNMARTFEMADEENDQAGHFVDVWPYWMDKSDA-VANSFDLSGLFLLTAPNMSGKSTLMRSTAAAALLSNCGLCAPLGPNSSIRRFDSIFVRGASSDVPTEDKSAFGAEMGDIAALLRSCGDRSLVFVDELGRGTSPKDGTSLAGAVLEAMAEEGMSGIFATHLHGLLTLPLVESAQDRIRKKRMAIHDKRKGTNNDSIGEDCTDVTWTYRLEDGVCTDSLALVTAAKFGLSDRILKRANFLSEVVD 511          
BLAST of mRNA_S-ischiensis_contig85.20144.1 vs. uniprot
Match: A0A7S4EIL4_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EIL4_9STRA)

HSP 1 Score: 263 bits (672), Expect = 1.030e-74
Identity = 149/322 (46.27%), Postives = 202/322 (62.73%), Query Frame = 0
Query:    4 FIHPSDRNGAVVRKRFTTEKVAKALSGYLSAVQGASDAVRTALQQLSSTLVDNKDLPAITQAAHWAVICQALEGHVRQAAASRWCLPRLKDPKDPDMSMQVEGLAPYWLPPGQGGVSNSFDLAGIFLLTAPNMSGKSTLLRATTAAALLANAGLHCPCMSAT-VPRYDGFFLRTASHDVPSEGKSAFAQEVEDVSVMLRDASPRTLAMVDELGRGTSARDGTAIAGAILEKMSHLSLTAIFATHLHELFDLPLRADPLVYKRMGIDWGGRGGEGEGEGGDDEPRWTYKLEDGRCTDSLGIQTARSYGFPEDVLGRAGEFREM 324
            F+HP DR G V+  R+TTEKV +A+S Y+S    A++ V + L  L+  L D+  +PAI Q++H  +I      H  +A  SRW L    + K P        + PYW+  G   V+N+FDL+ + LLTAPNMSGKSTL+R+T AAALL   GL  P  S + + R+D  FLR AS DVP+E KSAF  E+ D++ + R + P++   VDELGRGTS RDGT +AGA+LE M+   ++ +FATHLH++ DLPLR D +V KR+ ID   R  E       D  +WT+KLEDGRCTDS+ + TA  +G PE ++ RA E  E 
Sbjct:  689 FVHPYDRFGKVLSNRWTTEKVKQAVSRYVSECDNATNEVASILSDLAQNLQDDGHIPAIVQSSHLNLILSTAFHHAIKATNSRWQLANTIEDK-PSSEAHFVNVFPYWMH-GSKAVTNTFDLSSMILLTAPNMSGKSTLMRSTAAAALLTVCGLCAPLSSESRISRFDTLFLRGASADVPTEDKSAFGAEMGDLAALFRCSGPKSFVFVDELGRGTSPRDGTRLAGAVLESMAESGMSGVFATHLHDVLDLPLRKDRIVTKRIKID---RDEES------DTYQWTHKLEDGRCTDSMALVTAERFGLPEHIIKRAKELTEF 999          
BLAST of mRNA_S-ischiensis_contig85.20144.1 vs. uniprot
Match: A0A7S2UM94_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UM94_9STRA)

HSP 1 Score: 258 bits (658), Expect = 2.190e-73
Identity = 170/439 (38.72%), Postives = 239/439 (54.44%), Query Frame = 0
Query:    4 FIHPSDRNGAVVRKRFTTEKVAKALSGYLSAVQGASDAVRTALQQLSSTLVDNKDLPAITQAAHWAVICQALEGHVRQAAASRWCLPRLKDPK-----DPDMSMQVEGLAPYWLPPGQGGVSNSFDLAGIFLLTAPNMSGKSTLLRATTAAALLANAGLHCP-CMSATVPRYDGFFLRTASHDVPSEGKSAFAQEVEDVSVMLRDASPRTLAMVDELGRGTSARDGTAIAGAILEKMSHLSLTAIFATHLHELFDLPLRA---DPLVYKRMGIDWGGRGGEGEGEGGDDEPRWTYKLEDGRCTDSLGIQTARSYGFPEDVLGRAGEFREMFDTHC------RTTAHQATSKPIGGGGTATDEQQRVFPGPHVGVRGGAKSDGGGAWGGVDVSIHDIRQLMDPGPTTTASTTTFVIPEGQQTPPSLERLPCLYALRVTPR 427
            + HP DRNG V+R R+TT  V  ALS Y+ A + A   V   L  LS+TL D   LPA+ QAAH  +I      H   + A  W + ++ +       +P+++  ++ + PYW+   +  V+NSF L G+FLLTAPNMSGKSTL+R+T AAALL+N GL  P    +++ R+D  F+R AS DVP+EGKSAF  E+ D++ ++R    ++L  VDELGRGTS +DGT++AGA+LE M+   +  IFATHLH + DLPL     + +  KRM I    +    + E    E  WTY+LEDG C DSL + TAR +G PE++L RA    E+F          R T+H+  S       + T   QRV  G  + V             G+D ++  + +          +     IP     P SLE   C+Y L+V  R
Sbjct:  504 YFHPRDRNGKVLRNRYTTANVQAALSDYVEACETACKEVTKVLTNLSATLCDEGHLPAVVQAAHANLILSTAAHHAANSNALGWSMAQVFEKNTSGSPNPNLAGNIKDIWPYWMDRHES-VANSFKLDGLFLLTAPNMSGKSTLMRSTAAAALLSNCGLCAPLAQGSSIQRFDALFVRGASADVPTEGKSAFGAEMGDIAALIRSCGDKSLVFVDELGRGTSPKDGTSLAGAVLEAMAESRMNGIFATHLHGILDLPLSPVAQEHIFMKRMAIH---KNSNVDVESPTYE--WTYRLEDGVCKDSLALVTARHFGLPENILNRA----ELFSLSLVSSNPNRITSHEGDSDTSP---SFTHSNQRVANGASLPVSNNV---------GLDHAMTIVEEYAG------ENEKVVRIPPKWMCPASLEGYCCVYILQVDDR 914          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig85.20144.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K8J3_9PHAE2.320e-11656.61DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
A0A0G4EAV3_VITBC7.490e-10052.94DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]
D7FNS7_ECTSI1.310e-8965.45MutS protein homolog 1A n=1 Tax=Ectocarpus silicul... [more]
W7TDK9_9STRA3.960e-8843.57Dna mismatch repair protein n=1 Tax=Nannochloropsi... [more]
A0A4D9CWC2_9STRA5.240e-8544.36DNA mismatch repair protein n=2 Tax=Monodopsidacea... [more]
A0A812URG2_SYMMI3.120e-8243.53MSH1 protein (Fragment) n=1 Tax=Symbiodinium micro... [more]
A0A7S0DLR2_9EUKA7.110e-7640.82Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A7S1ZN30_9STRA1.090e-7544.85Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S4EIL4_9STRA1.030e-7446.27Hypothetical protein n=2 Tax=Pseudo-nitzschia aust... [more]
A0A7S2UM94_9STRA2.190e-7338.72Hypothetical protein n=1 Tax=Attheya septentrional... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000432DNA mismatch repair protein MutS, C-terminalSMARTSM00534mutATP5coord: 126..323
e-value: 4.7E-37
score: 139.1
IPR000432DNA mismatch repair protein MutS, C-terminalPFAMPF00488MutS_Vcoord: 130..321
e-value: 4.3E-40
score: 137.8
IPR000432DNA mismatch repair protein MutS, C-terminalPROSITEPS00486DNA_MISMATCH_REPAIR_2coord: 207..223
NoneNo IPR availableGENE3D3.40.50.300coord: 96..349
e-value: 1.6E-58
score: 200.0
NoneNo IPR availablePANTHERPTHR11361:SF82DNA MISMATCH REPAIR PROTEIN MSH1, MITOCHONDRIALcoord: 16..328
NoneNo IPR availablePANTHERPTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERcoord: 16..328
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 118..325

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig85contigS-ischiensis_contig85:363869..373863 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig85.20144.1mRNA_S-ischiensis_contig85.20144.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig85 363868..373863 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig85.20144.1 ID=prot_S-ischiensis_contig85.20144.1|Name=mRNA_S-ischiensis_contig85.20144.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=433bp
LPTFIHPSDRNGAVVRKRFTTEKVAKALSGYLSAVQGASDAVRTALQQLS
STLVDNKDLPAITQAAHWAVICQALEGHVRQAAASRWCLPRLKDPKDPDM
SMQVEGLAPYWLPPGQGGVSNSFDLAGIFLLTAPNMSGKSTLLRATTAAA
LLANAGLHCPCMSATVPRYDGFFLRTASHDVPSEGKSAFAQEVEDVSVML
RDASPRTLAMVDELGRGTSARDGTAIAGAILEKMSHLSLTAIFATHLHEL
FDLPLRADPLVYKRMGIDWGGRGGEGEGEGGDDEPRWTYKLEDGRCTDSL
GIQTARSYGFPEDVLGRAGEFREMFDTHCRTTAHQATSKPIGGGGTATDE
QQRVFPGPHVGVRGGAKSDGGGAWGGVDVSIHDIRQLMDPGPTTTASTTT
FVIPEGQQTPPSLERLPCLYALRVTPRHRPDGW
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000432DNA_mismatch_repair_MutS_C
IPR027417P-loop_NTPase