prot_S-ischiensis_contig85.20132.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig85.20132.1
Unique Nameprot_S-ischiensis_contig85.20132.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length356
Homology
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BLAST of mRNA_S-ischiensis_contig85.20132.1 vs. uniprot
Match: D7G4B6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4B6_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 3.420e-20
Identity = 82/233 (35.19%), Postives = 113/233 (48.50%), Query Frame = 0 
Query:   79 LEASCLDPETGVRRRWVVKRSQTDFDDFNTYLLDVFGYEA----VPALPPPGAPLPVLETYLGRLLDIPRVLSTPAIYDFLDVPADVVDEPVLLAEVVED------ARRWPTRSANPWEQQXXXXXXXXXXXXGGRXXXXXXXXXXXXXXXXQPPSSEEFASDRRSRSAG--VAGAVXXXXXXXXXXXXXXXXXXXXXXXXDDVIGDVAKQAGAAADATIDRAKELDREFDIT 299
            ++AS ++  TG RR W   RS+ DF      L+      A    VP  PP G+   V E YL RL+D+P V S PA+Y+FLD P D+V EPVL  EVV+D      A+R+  RSANP + +                                  SS  + +D     +G  VAG  XXXXXXX                 +D +G+VAK AGA ADA +++A+ L+REF+++
Sbjct:   43 IQASYVELGTGTRRTWTASRSEKDFFALGVTLMGKLAGSAADAKVPGPPPEGSSPAVFEVYLRRLIDVPVVTSLPALYEFLDAPPDLVQEPVLFGEVVDDDFGGGRAKRY--RSANPDDPRTAS-------------------------------SSSAYGNDVDGNKSGATVAGXXXXXXXXXPVGAAIGAMAARAASGREDGVGNVAKGAGAVADAAMEKAQALEREFELS 242
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BLAST of mRNA_S-ischiensis_contig85.20132.1 vs. uniprot
Match: A0A6H5KTK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTK9_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 4.680e-20
Identity = 96/301 (31.89%), Postives = 133/301 (44.19%), Query Frame = 0 
Query:   33 SRPADAIGHQHARPRQHSFRAR-----STTMLTAADGVTVVIIEGGGSGYR-----------------LEASCLDPETGVRRRWVVKRSQTDFDDFNTYLLDVFGYEA----VPALPPPGAPLPVLETYLGRLLDIPRVLSTPAIYDFLDVPADVVDEPVLLAEVVED------ARRWPTRSANPWEQQXXXXXXXXXXXXGGRXXXXXXXXXXXXXXXXQPPSSEEFAS--DRRSRSAGVAGAVXXXXXXXXXXXXXXXXXXXXXXXXDDVIGDVAKQAGAAADATIDRAKELDREFDIT 299
            SR + +       PR  S R       +T M  AA+G+ V ++   G                     ++AS ++P TG RR W   RS+ DF      L+      A    VP  PP G+   V E YL RL+D+P V S PA+Y+FLD P D+V EPVL  EVV+D      A+R+  RSANP + +                                  SS  + +  D     A VA   XXXXXXXX                +D +G+VAK AGA ADA +++A+ L+REF+++
Sbjct:   73 SRCSSSXXXXXXXPRSRSSRLEDALSYTTRMSLAAEGLDVWVVSDDGRTXXXXXXXXXXXXXXAKLLSIQASYVEPGTGTRRTWTASRSEKDFFALGVTLMGKLAGSAADAKVPGPPPEGSSPVVFEVYLRRLIDVPVVTSLPALYEFLDAPPDLVQEPVLFGEVVDDDFGGGRAKRY--RSANPDDPRTAS-------------------------------SSSAYGNNVDGNKSGATVAXXXXXXXXXXXVGAAIGAIAARAASGREDGVGNVAKGAGAVADAAMEKAQALEREFELS 340
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BLAST of mRNA_S-ischiensis_contig85.20132.1 vs. uniprot
Match: A0A835ZJG0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJG0_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 9.040e-6
Identity = 40/101 (39.60%), Postives = 49/101 (48.51%), Query Frame = 0 
Query:   91 RRRWVVKRSQTDFDDFNTYLLDVFGYEAVPA---LPPPGAPLPVLETYLGRLLDIPRVLSTPAIYDFLDVPADVVDEPVLLAEVVEDARRWP---TRSANP 185
            RR W V RS   F   +  +L        P     P P A    LE YL +LL     L++P +Y FL  P DVV+EPVL+ EVV D   W     RSA+P
Sbjct:  236 RRTWSVVRSDAQFAALSDAILAALAAGTAPPPLRYPGPAAGADALERYLAQLLRSGAALASPDLYAFLAAPPDVVEEPVLIGEVV-DEDSWTDRRVRSADP 335
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig85.20132.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G4B6_ECTSI3.420e-2035.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTK9_9PHAE4.680e-2031.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZJG0_9STRA9.040e-639.60Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 75..163
e-value: 1.7E-5
score: 26.6
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 91..158
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..355
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 28..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.771

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig85contigS-ischiensis_contig85:251340..254928 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig85.20132.1mRNA_S-ischiensis_contig85.20132.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig85 251303..255370 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig85.20132.1 ID=prot_S-ischiensis_contig85.20132.1|Name=mRNA_S-ischiensis_contig85.20132.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=356bp
MLASQMKSALALTLGLCHAVCLGWAFVFAPPPSRPADAIGHQHARPRQHS
FRARSTTMLTAADGVTVVIIEGGGSGYRLEASCLDPETGVRRRWVVKRSQ
TDFDDFNTYLLDVFGYEAVPALPPPGAPLPVLETYLGRLLDIPRVLSTPA
IYDFLDVPADVVDEPVLLAEVVEDARRWPTRSANPWEQQQQQSARRRRRR
DGGRGGWGGAWSRWSEESEEQPPSSEEFASDRRSRSAGVAGAVVGGLLGG
PVGALLGSIAGSKAAERDDVIGDVAKQAGAAADATIDRAKELDREFDITG
RAGKAAAEAVSVAQKVDEEYHIREKAKGVLRTVEKTVKKSVDGIADAVAE
GRRRD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036871PX_dom_sf