prot_S-ischiensis_contig84.20104.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig84.20104.1
Unique Nameprot_S-ischiensis_contig84.20104.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length99
Homology
BLAST of mRNA_S-ischiensis_contig84.20104.1 vs. uniprot
Match: D7G8Y9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Y9_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 5.950e-38
Identity = 69/83 (83.13%), Postives = 74/83 (89.16%), Query Frame = 0
Query:   14 AAGSHTVAVQLSGYRWLPQVCADRLGTRATPLRALLGRRDQRLVCLDPRLAAALALVTEVHHLNGGRQVTLRSVFRLQNCTDH 96
            A GSHTVAVQ+SGYRW+P+VCAD LGTRA PLRALLGR D R VC DP LAAAL+LV +VHHLNGGRQVTLRSVFRLQNCTDH
Sbjct: 4359 AGGSHTVAVQVSGYRWMPEVCADNLGTRAIPLRALLGRVDARRVCPDPGLAAALSLVADVHHLNGGRQVTLRSVFRLQNCTDH 4441          
BLAST of mRNA_S-ischiensis_contig84.20104.1 vs. uniprot
Match: A0A6H5L016_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L016_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 4.160e-33
Identity = 64/83 (77.11%), Postives = 70/83 (84.34%), Query Frame = 0
Query:    9 PTAAAAAGSHTVAVQLSGYRWLPQVCADRLGTRATPLRALLGRRDQRLVCLDPRLAAALALVTEVHHLNGGRQVTLRSVFRLQ 91
            P    A GSHTVAVQ+SGYRW+P+VCAD LGTRA PLRALLGR D R VC DP +AAAL+LV +VHHLNGGRQVTLRSVFRLQ
Sbjct: 1078 PKGQRAGGSHTVAVQVSGYRWMPEVCADNLGTRAIPLRALLGRVDARRVCPDPGVAAALSLVADVHHLNGGRQVTLRSVFRLQ 1160          
BLAST of mRNA_S-ischiensis_contig84.20104.1 vs. uniprot
Match: W7TRD9_9STRA (Vacuolar protein sorting-associated protein 13 family protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRD9_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.370e-9
Identity = 36/82 (43.90%), Postives = 47/82 (57.32%), Query Frame = 0
Query:   17 SHTVAVQLSGYRWLPQVCADRLGTRATPLRALLGRRDQRLVCLDPRLAAALALVTEVHHLNGGRQVTLRSVFRLQNCTDHNL 98
            S  + VQ   YRWL  V AD LG +   L  L G      +  D ++  A  LV+EV  +NG RQ+TLRSVFR++NCT H +
Sbjct: 2667 SWIICVQPKDYRWLSCVSADALGLQFQSLWPLHGLPHAERLLEDWKIRNAFKLVSEVRVVNGCRQLTLRSVFRVKNCTKHKI 2748          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig84.20104.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G8Y9_ECTSI5.950e-3883.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L016_9PHAE4.160e-3377.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TRD9_9STRA1.370e-943.90Vacuolar protein sorting-associated protein 13 fam... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig84contigS-ischiensis_contig84:667650..668237 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig84.20104.1mRNA_S-ischiensis_contig84.20104.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig84 667650..668239 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig84.20104.1 ID=prot_S-ischiensis_contig84.20104.1|Name=mRNA_S-ischiensis_contig84.20104.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=99bp
RRRQLEVQPTAAAAAGSHTVAVQLSGYRWLPQVCADRLGTRATPLRALLG
RRDQRLVCLDPRLAAALALVTEVHHLNGGRQVTLRSVFRLQNCTDHNLA
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