prot_S-ischiensis_contig83.20021.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig83.20021.1
Unique Nameprot_S-ischiensis_contig83.20021.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length190
Homology
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BLAST of mRNA_S-ischiensis_contig83.20021.1 vs. uniprot
Match: D8LBK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK8_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 1.500e-12
Identity = 42/108 (38.89%), Postives = 66/108 (61.11%), Query Frame = 0 
Query:   47 EELRIDLGGRVDEE-------GDEGPL-AEGEFPHRLHSLHEDFLQLVQGNLEEFLDEEGLTEGELRNRCQEALESDASGEAAAFLRALLASWDFASFVELATNYVRE 146
            E  R +LGG   EE       G EG    +G F  R+H L+++FL+++Q NLEEFL  EGLTE +LR+ C++ + +   G    F+  L++SW+F+SF+ L +++  E
Sbjct:   63 EAKREELGGEKQEEASMARGEGAEGYQDGDGHFSQRVHELYQEFLKILQSNLEEFLQAEGLTETQLRDACEKEMRAK-GGRGDCFMHTLISSWEFSSFIALVSDFAAE 169
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BLAST of mRNA_S-ischiensis_contig83.20021.1 vs. uniprot
Match: A0A7S3DCL9_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DCL9_9EUKA)

HSP 1 Score: 63.9 bits (154), Expect = 1.030e-9
Identity = 41/129 (31.78%), Postives = 65/129 (50.39%), Query Frame = 0 
Query:   21 IVHKISEHLGDGGLEKDLNDFLRSNQEELRIDLGGRVDEEGDEGPLAEGEFPHRLHSLHEDFLQLVQGNLEEFLDEEGLTEGELRNRCQEALESDASGEAAAFLRALLASWDFASFVELATNYVRELDE 149
            I+ +++++LG G     +  FL     +++             GP +E E  H  H +H  F+ L +  LE F+ EEGL+  E +  C EA   D     A FL AL+ASW++ +F+ LA +Y  E+ E
Sbjct:    9 IILRLADYLGQGDFASHIEAFLDEYATKVKA------------GPSSE-EHDHESHDIHLKFIALTEKLLEGFVKEEGLSNEEFKAICSEAQSRDEVS--ANFLEALIASWEYPTFLSLAHDYAEEMKE 122
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BLAST of mRNA_S-ischiensis_contig83.20021.1 vs. uniprot
Match: A0A7S3WKS4_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WKS4_9SPIT)

HSP 1 Score: 54.3 bits (129), Expect = 2.320e-6
Identity = 27/89 (30.34%), Postives = 49/89 (55.06%), Query Frame = 0 
Query:   69 GEFPHRLHSLHEDFLQLVQGNLEEFLDEEGLTEGELRNRCQEALESDASGEAAAFLRALLASWDFASFVELATNYVRELDETDSDCSDG 157
            GE  H L+ ++  F+QL++G L +FLDEE +T+      C+   ++     A   + ALL++ D+  FVE   +++ E +  + +  DG
Sbjct:    6 GEHHHGLYEVYRGFVQLIEGTLRKFLDEEAMTQDAFVELCRRVQQTTQESAATNLINALLSATDYQHFVEFMLDFLDEAEHPEDNEEDG 94
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig83.20021.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LBK8_ECTSI1.500e-1238.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3DCL9_9EUKA1.030e-931.78Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A7S3WKS4_9SPIT2.320e-630.34Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042541BART domain superfamilyGENE3D1.20.58.1900coord: 17..152
e-value: 2.2E-7
score: 32.6
IPR023379BART domainPFAMPF11527ARL2_Bind_BARTcoord: 69..148
e-value: 2.1E-6
score: 27.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig83contigS-ischiensis_contig83:524921..528641 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig83.20021.1mRNA_S-ischiensis_contig83.20021.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig83 524873..531302 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig83.20021.1 ID=prot_S-ischiensis_contig83.20021.1|Name=mRNA_S-ischiensis_contig83.20021.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=190bp
MEPKNDGNVAVPTPASASTAIVHKISEHLGDGGLEKDLNDFLRSNQEELR
IDLGGRVDEEGDEGPLAEGEFPHRLHSLHEDFLQLVQGNLEEFLDEEGLT
EGELRNRCQEALESDASGEAAAFLRALLASWDFASFVELATNYVRELDET
DSDCSDGDDGGGSGPDKSGHGGSIGGGGGSEDGGDSGGT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042541BART_sf
IPR023379BART_dom