prot_S-ischiensis_contig83.19987.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig83.19987.1
Unique Nameprot_S-ischiensis_contig83.19987.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length82
Homology
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BLAST of mRNA_S-ischiensis_contig83.19987.1 vs. uniprot
Match: A0A6H5KRD8_9PHAE (BZIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRD8_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 6.510e-7
Identity = 29/63 (46.03%), Postives = 41/63 (65.08%), Query Frame = 0 
Query:    8 QVNFAVDASELISTGEKLMGPFRASSALLSVPGMLRASFNSKTVRLQRLELSFDPQLVAAQLA 70
            +V + VD  E++   +  M PF A S  L VPGML+ASF++K+ RL  ++ SFDP + A QLA
Sbjct:  507 RVYYVVDPKEVMGLNQAFMCPFLARSPQLLVPGMLKASFSTKSNRLCSVQFSFDPTVPARQLA 569
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig83.19987.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KRD8_9PHAE6.510e-746.03BZIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig83contigS-ischiensis_contig83:262730..264334 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig83.19987.1mRNA_S-ischiensis_contig83.19987.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig83 262730..264335 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig83.19987.1 ID=prot_S-ischiensis_contig83.19987.1|Name=mRNA_S-ischiensis_contig83.19987.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=82bp
GAGGNRGQVNFAVDASELISTGEKLMGPFRASSALLSVPGMLRASFNSKT
VRLQRLELSFDPQLVAAQLAGGSGVSPAAAAS
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