prot_S-ischiensis_contig83.19964.1 (polypeptide) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig83.19964.1 vs. uniprot
Match: D7FZX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZX9_ECTSI) HSP 1 Score: 86.7 bits (213), Expect = 1.800e-16 Identity = 41/58 (70.69%), Postives = 50/58 (86.21%), Query Frame = 0
Query: 108 GRLPRQHQEERRNLPIFKYREQLVAAVREHQTVVVVGETGSGKSTQIPQFLCEAGFCR 165
GR+PR+HQE+RR LPIF ++ ++ AV++HQTVVVVGETGSGKSTQIPQFL EAG R
Sbjct: 321 GRVPRKHQEQRRGLPIFAHKADIIRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGITR 378
BLAST of mRNA_S-ischiensis_contig83.19964.1 vs. uniprot
Match: A0A6H5KJ10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ10_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 5.920e-16 Identity = 41/58 (70.69%), Postives = 49/58 (84.48%), Query Frame = 0
Query: 108 GRLPRQHQEERRNLPIFKYREQLVAAVREHQTVVVVGETGSGKSTQIPQFLCEAGFCR 165
GR+PR+HQE+RR LPIF ++ ++ AV+ HQTVVVVGETGSGKSTQIPQFL EAG R
Sbjct: 321 GRVPRKHQEQRRGLPIFAHKADIIRAVKYHQTVVVVGETGSGKSTQIPQFLYEAGITR 378
BLAST of mRNA_S-ischiensis_contig83.19964.1 vs. uniprot
Match: A0A835ZD99_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD99_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 3.670e-15 Identity = 42/72 (58.33%), Postives = 55/72 (76.39%), Query Frame = 0
Query: 107 SGRLPRQHQEERRNLPIFKYREQLVAAVREHQTVVVVGETGSGKSTQIPQFLCEAGFCRPPALADGHASPSP 178
S RLPRQHQE RR LP+F++R+ +V AV+ H+TVV+VGETGSGKSTQIPQ+L +AG + G+ + SP
Sbjct: 26 SPRLPRQHQEVRRQLPVFQHRDNIVTAVKTHRTVVLVGETGSGKSTQIPQYLYDAGLASKHKGSSGNGTLSP 97
BLAST of mRNA_S-ischiensis_contig83.19964.1 vs. uniprot
Match: F2UF32_SALR5 (ATP-dependent helicase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UF32_SALR5) HSP 1 Score: 78.6 bits (192), Expect = 1.150e-13 Identity = 33/51 (64.71%), Postives = 46/51 (90.20%), Query Frame = 0
Query: 115 QEERRNLPIFKYREQLVAAVREHQTVVVVGETGSGKSTQIPQFLCEAGFCR 165
QE R++LP+FKYREQ + AV+EHQ +++VGETGSGK+TQ+PQ+L EAG+C+
Sbjct: 397 QEVRKSLPVFKYREQFLEAVKEHQILIIVGETGSGKTTQLPQYLVEAGYCK 447
BLAST of mRNA_S-ischiensis_contig83.19964.1 vs. uniprot
Match: A0A0M0JGR2_9EUKA (Pre-mRNA-splicing factor ATP-dependent RNA helicase dhx16-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JGR2_9EUKA) HSP 1 Score: 77.4 bits (189), Expect = 2.900e-13 Identity = 33/51 (64.71%), Postives = 44/51 (86.27%), Query Frame = 0
Query: 116 EERRNLPIFKYREQLVAAVREHQTVVVVGETGSGKSTQIPQFLCEAGFCRP 166
E R+ LP++ YRE+++AAVREHQ +++VGETGSGK+TQIPQ+L EAG C P
Sbjct: 435 EVRKTLPVYAYREEIIAAVREHQVLIIVGETGSGKTTQIPQYLYEAGLCAP 485
BLAST of mRNA_S-ischiensis_contig83.19964.1 vs. uniprot
Match: A0A3P7I8F4_STRVU (Helicase ATP-binding domain-containing protein n=1 Tax=Strongylus vulgaris TaxID=40348 RepID=A0A3P7I8F4_STRVU) HSP 1 Score: 73.6 bits (179), Expect = 5.770e-13 Identity = 30/51 (58.82%), Postives = 44/51 (86.27%), Query Frame = 0
Query: 115 QEERRNLPIFKYREQLVAAVREHQTVVVVGETGSGKSTQIPQFLCEAGFCR 165
+E RR+LP++ +REQ + AV+EHQ +++ GETGSGK+TQ+PQ+L EAGFC+
Sbjct: 55 EETRRSLPVYAFREQFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCK 105
BLAST of mRNA_S-ischiensis_contig83.19964.1 vs. uniprot
Match: A0A7J7C7L0_TRIWF (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 n=2 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7C7L0_TRIWF) HSP 1 Score: 75.9 bits (185), Expect = 8.560e-13 Identity = 33/52 (63.46%), Postives = 45/52 (86.54%), Query Frame = 0
Query: 114 HQEERRNLPIFKYREQLVAAVREHQTVVVVGETGSGKSTQIPQFLCEAGFCR 165
HQEER+ LPI+ YR++L+ AV +HQ +V+VGETGSGK+TQIPQ+L EAG+ +
Sbjct: 70 HQEERKTLPIYAYRDELLQAVNDHQVIVIVGETGSGKTTQIPQYLHEAGYTK 121
BLAST of mRNA_S-ischiensis_contig83.19964.1 vs. uniprot
Match: A0A8B8NH32_9MYRT (RNA helicase n=4 Tax=Myrtoideae TaxID=1699513 RepID=A0A8B8NH32_9MYRT) HSP 1 Score: 75.9 bits (185), Expect = 9.850e-13 Identity = 33/50 (66.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query: 116 EERRNLPIFKYREQLVAAVREHQTVVVVGETGSGKSTQIPQFLCEAGFCR 165
EER+NLPI+ YREQ++ A+R+HQ +V+VGETGSGK+TQIPQ+L EAG+ +
Sbjct: 411 EERKNLPIYPYREQILEAIRDHQVLVIVGETGSGKTTQIPQYLHEAGYTK 460
BLAST of mRNA_S-ischiensis_contig83.19964.1 vs. uniprot
Match: A0A6I9Z2V4_9SAUR (putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X1 n=1 Tax=Thamnophis sirtalis TaxID=35019 RepID=A0A6I9Z2V4_9SAUR) HSP 1 Score: 73.2 bits (178), Expect = 1.190e-12 Identity = 32/51 (62.75%), Postives = 43/51 (84.31%), Query Frame = 0
Query: 115 QEERRNLPIFKYREQLVAAVREHQTVVVVGETGSGKSTQIPQFLCEAGFCR 165
QE RR+LPIF YRE L+AA+ +HQ +++ GETGSGK+TQIPQ+LCE G+ +
Sbjct: 78 QEVRRSLPIFPYREDLLAAIAQHQMLIIEGETGSGKTTQIPQYLCEEGYTK 128
BLAST of mRNA_S-ischiensis_contig83.19964.1 vs. uniprot
Match: A0A0J8BB81_BETVV (RNA helicase n=3 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A0J8BB81_BETVV) HSP 1 Score: 75.5 bits (184), Expect = 1.340e-12 Identity = 33/51 (64.71%), Postives = 46/51 (90.20%), Query Frame = 0
Query: 115 QEERRNLPIFKYREQLVAAVREHQTVVVVGETGSGKSTQIPQFLCEAGFCR 165
QEER+ LPI+ YRE+L++AVR+HQ +++VGETGSGK+TQIPQ+L EAG+ +
Sbjct: 411 QEERKTLPIYPYREELLSAVRDHQVLIIVGETGSGKTTQIPQYLHEAGYTK 461 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig83.19964.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_S-ischiensis_contig83.19964.1 ID=prot_S-ischiensis_contig83.19964.1|Name=mRNA_S-ischiensis_contig83.19964.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=182bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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